RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 GRIK4Q16099 956 aa10.14□□□□□ -0.79
COL6A4P1-203ENST00000491915 PLEKHG4Q58EX7 1191 aa10.14□□□□□ -0.79
COL6A4P1-203ENST00000491915 CNKSR3Q6P9H4 555 aa10.14□□□□□ -0.79
COL6A4P1-203ENST00000491915 PLPPR4Q7Z2D5 763 aa10.14□□□□□ -0.79
COL6A4P1-203ENST00000491915 REXO1Q8N1G1 1221 aaKnown RBP10.14□□□□□ -0.79
COL6A4P1-203ENST00000491915 NECAB1Q8N987 351 aa10.14□□□□□ -0.79
COL6A4P1-203ENST00000491915 MAFAQ8NHW3 353 aaPredicted RBP10.14□□□□□ -0.79
COL6A4P1-203ENST00000491915 TRAPPC12Q8WVT3 735 aa10.14□□□□□ -0.79
COL6A4P1-203ENST00000491915 DNAJB3Q8WWF6 145 aa10.14□□□□□ -0.79
COL6A4P1-203ENST00000491915 GJA10Q969M2 543 aa10.14□□□□□ -0.79
COL6A4P1-203ENST00000491915 LENG9Q96B70 501 aa10.14□□□□□ -0.79
COL6A4P1-203ENST00000491915 IL17RAQ96F46 866 aa10.14□□□□□ -0.79
COL6A4P1-203ENST00000491915 SDF4Q9BRK5 362 aa10.14□□□□□ -0.79
COL6A4P1-203ENST00000491915 CERS4Q9HA82 394 aa10.14□□□□□ -0.79
COL6A4P1-203ENST00000491915 SLC28A3Q9HAS3 691 aa10.14□□□□□ -0.79
COL6A4P1-203ENST00000491915 SH3GLB2Q9NR46 395 aa10.14□□□□□ -0.79
COL6A4P1-203ENST00000491915 GJB4Q9NTQ9 266 aa10.14□□□□□ -0.79
COL6A4P1-203ENST00000491915 ERAP1Q9NZ08 941 aa10.14□□□□□ -0.79
COL6A4P1-203ENST00000491915 ZNF215Q9UL58 517 aaPredicted RBP10.14□□□□□ -0.79
COL6A4P1-203ENST00000491915 ABHD14A-ACY1A0A1B0GW23 586 aa10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 LCHNA4D1U4 455 aa10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 IPO5O00410 1097 aaKnown RBP10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 LARGE1O95461 756 aa10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 CA3P07451 260 aa10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 FDPSP14324 419 aaKnown RBP10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 AK2P54819 239 aa10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 ANAPC15P60006 121 aa10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 IGBP1P78318 339 aa10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 TAP1Q03518 808 aa10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 IKBKEQ14164 716 aa10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 PRR16Q569H4 304 aa10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 SWSAP1Q6NVH7 229 aa10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 FAM117BQ6P1L5 589 aa10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 CCDC12Q8WUD4 166 aaPredicted RBP10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 SLC9A7Q96T83 725 aa10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 SLKQ9H2G2 1235 aaPredicted RBP10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 PRDM6Q9NQX0 595 aa10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 PCDHA4Q9UN74 947 aa10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 KCNJ14Q9UNX9 436 aa10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 GBF1Q92538 1859 aa10.13□□□□□ -0.79
COL6A4P1-203ENST00000491915 EMSYQ7Z589 1322 aa10.12□□□□□ -0.79
COL6A4P1-203ENST00000491915 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.12□□□□□ -0.79
COL6A4P1-203ENST00000491915 CPLX1O14810 134 aa10.12□□□□□ -0.79
COL6A4P1-203ENST00000491915 BAIAP3O94812 1187 aa10.12□□□□□ -0.79
COL6A4P1-203ENST00000491915 DEXIO95424 95 aa10.12□□□□□ -0.79
COL6A4P1-203ENST00000491915 USP11P51784 963 aa10.12□□□□□ -0.79
COL6A4P1-203ENST00000491915 MGAT3Q09327 533 aa10.12□□□□□ -0.79
COL6A4P1-203ENST00000491915 ME3Q16798 604 aa10.12□□□□□ -0.79
COL6A4P1-203ENST00000491915 MCTP2Q6DN12 878 aa10.12□□□□□ -0.79
COL6A4P1-203ENST00000491915 RPAINQ86UA6 219 aa10.12□□□□□ -0.79
COL6A4P1-203ENST00000491915 CCDC60Q8IWA6 550 aaPredicted RBP10.12□□□□□ -0.79
COL6A4P1-203ENST00000491915 TRIM22Q8IYM9 498 aa10.12□□□□□ -0.79
COL6A4P1-203ENST00000491915 BICD2Q8TD16 824 aa10.12□□□□□ -0.79
COL6A4P1-203ENST00000491915 TBCKQ8TEA7 893 aa10.12□□□□□ -0.79
COL6A4P1-203ENST00000491915 PPM1EQ8WY54 764 aa10.12□□□□□ -0.79
COL6A4P1-203ENST00000491915 ZNF577Q9BSK1 485 aa10.12□□□□□ -0.79
COL6A4P1-203ENST00000491915 POTEB3A0JP26 581 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 RRN3P2A6NIE6 340 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 ZBTB42B2RXF5 422 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 KIF28PB7ZC32 967 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 MSH4O15457 936 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 TLL1O43897 1013 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 GJB5O95377 273 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 IGFBP4P22692 258 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 KLRC1P26715 233 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 KCNJ6P48051 423 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 NEK4P51957 841 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 LPIN1Q14693 890 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 CCDC85BQ15834 202 aaPredicted RBP10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 PPP2R2DQ66LE6 453 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 KRT40Q6A162 431 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 POTEBQ6S5H4 581 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 TRMT1LQ7Z2T5 733 aaKnown RBP10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 RTN4RL1Q86UN2 441 aaPredicted RBP10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 BLIDQ8IZY5 108 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 CCDC148Q8NFR7 591 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 OXER1Q8TDS5 423 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 SEPT8Q92599 483 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 FAM49AQ9H0Q0 323 aaPredicted RBP10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 AZI2Q9H6S1 392 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 AGO3Q9H9G7 860 aaKnown RBP10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 CDHR5Q9HBB8 845 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 TBC1D22BQ9NU19 505 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 TUBE1Q9UJT0 475 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 TRPC6Q9Y210 931 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 PCDHA2Q9Y5H9 948 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 PTPRSQ13332 1948 aa10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 LAMA2P24043 3122 aaKnown RBP10.11□□□□□ -0.79
COL6A4P1-203ENST00000491915 CYP3A7-CYP3A51PA0A087WV96 503 aa10.1□□□□□ -0.79
COL6A4P1-203ENST00000491915 ENPP3O14638 875 aa10.1□□□□□ -0.79
COL6A4P1-203ENST00000491915 BACH1O14867 736 aa10.1□□□□□ -0.79
COL6A4P1-203ENST00000491915 HBP1O60381 514 aa10.1□□□□□ -0.79
COL6A4P1-203ENST00000491915 LPXNO60711 386 aa10.1□□□□□ -0.79
COL6A4P1-203ENST00000491915 CAND2O75155 1236 aa10.1□□□□□ -0.79
COL6A4P1-203ENST00000491915 TDP2O95551 362 aa10.1□□□□□ -0.79
COL6A4P1-203ENST00000491915 GHRP10912 638 aa10.1□□□□□ -0.79
COL6A4P1-203ENST00000491915 CYP3A7P24462 503 aa10.1□□□□□ -0.79
COL6A4P1-203ENST00000491915 TMEM62Q0P6H9 643 aa10.1□□□□□ -0.79
COL6A4P1-203ENST00000491915 ST3GAL1Q11201 340 aa10.1□□□□□ -0.79
COL6A4P1-203ENST00000491915 EARS2Q5JPH6 523 aaKnown RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms