RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 FAM184AQ8NB25 1140 aa17.09■□□□□ 0.33
CDC42SE1-205ENST00000491825 ANO3Q9BYT9 981 aa17.09■□□□□ 0.33
CDC42SE1-205ENST00000491825 MLXIPQ9HAP2 919 aa17.09■□□□□ 0.33
CDC42SE1-205ENST00000491825 PCDHA6Q9UN73 950 aa17.09■□□□□ 0.33
CDC42SE1-205ENST00000491825 PCDHA8Q9Y5H6 950 aa17.09■□□□□ 0.33
CDC42SE1-205ENST00000491825 PTPRSQ13332 1948 aa17.08■□□□□ 0.33
CDC42SE1-205ENST00000491825 ABHD14A-ACY1A0A1B0GW23 586 aa17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 H3BRB1 525 aa17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 ADAMTS3O15072 1205 aa17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 FIBPO43427 364 aa17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 TLL1O43897 1013 aa17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 LPXNO60711 386 aa17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 GJB5O95377 273 aa17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 MMP1P03956 469 aa17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 SREBF1P36956 1147 aa17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 MRPS5P82675 430 aaKnown RBP17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 KRT40Q6A162 431 aa17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 BLIDQ8IZY5 108 aa17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 CRYGNQ8WXF5 182 aa17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 ARNTL2Q8WYA1 636 aa17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 C8orf76Q96K31 380 aa17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 TUT1Q9H6E5 874 aaKnown RBP17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 GJB4Q9NTQ9 266 aa17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 KCNJ14Q9UNX9 436 aa17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 SMC3Q9UQE7 1217 aa17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 TELO2Q9Y4R8 837 aa17.08■□□□□ 0.32
CDC42SE1-205ENST00000491825 MYO9BQ13459 2157 aa17.07■□□□□ 0.32
CDC42SE1-205ENST00000491825 TNFRSF10AO00220 468 aa17.07■□□□□ 0.32
CDC42SE1-205ENST00000491825 SMIM10L2AP0DMW4 78 aa17.07■□□□□ 0.32
CDC42SE1-205ENST00000491825 SMIM10L2BP0DMW5 78 aa17.07■□□□□ 0.32
CDC42SE1-205ENST00000491825 GJB2P29033 226 aa17.07■□□□□ 0.32
CDC42SE1-205ENST00000491825 NEDD9Q14511 834 aa17.07■□□□□ 0.32
CDC42SE1-205ENST00000491825 MICALL1Q8N3F8 863 aa17.07■□□□□ 0.32
CDC42SE1-205ENST00000491825 FBXO18Q8NFZ0 1043 aa17.07■□□□□ 0.32
CDC42SE1-205ENST00000491825 GPR20Q99678 358 aa17.07■□□□□ 0.32
CDC42SE1-205ENST00000491825 BRMS1Q9HCU9 246 aa17.07■□□□□ 0.32
CDC42SE1-205ENST00000491825 TMEM260Q9NX78 707 aa17.07■□□□□ 0.32
CDC42SE1-205ENST00000491825 RTEL1Q9NZ71 1219 aa17.07■□□□□ 0.32
CDC42SE1-205ENST00000491825 MYH7BA7E2Y1 1941 aa17.06■□□□□ 0.32
CDC42SE1-205ENST00000491825 C17orf102A2RUQ5 167 aa17.06■□□□□ 0.32
CDC42SE1-205ENST00000491825 EFCAB14O75071 495 aa17.06■□□□□ 0.32
CDC42SE1-205ENST00000491825 LGR5O75473 907 aa17.06■□□□□ 0.32
CDC42SE1-205ENST00000491825 GRB10Q13322 594 aa17.06■□□□□ 0.32
CDC42SE1-205ENST00000491825 JAKMIP3Q5VZ66 844 aa17.06■□□□□ 0.32
CDC42SE1-205ENST00000491825 CYFIP1Q7L576 1253 aa17.06■□□□□ 0.32
CDC42SE1-205ENST00000491825 TRIM50Q86XT4 487 aa17.06■□□□□ 0.32
CDC42SE1-205ENST00000491825 RASGRP4Q8TDF6 673 aa17.06■□□□□ 0.32
CDC42SE1-205ENST00000491825 ADAMTS19Q8TE59 1207 aa17.06■□□□□ 0.32
CDC42SE1-205ENST00000491825 SENP7Q9BQF6 1050 aa17.06■□□□□ 0.32
CDC42SE1-205ENST00000491825 RNPEPQ9H4A4 650 aa17.06■□□□□ 0.32
CDC42SE1-205ENST00000491825 EMSYQ7Z589 1322 aa17.05■□□□□ 0.32
CDC42SE1-205ENST00000491825 RSPH10B2B2RC85 870 aa17.05■□□□□ 0.32
CDC42SE1-205ENST00000491825 NOP56O00567 594 aaKnown RBP17.05■□□□□ 0.32
CDC42SE1-205ENST00000491825 TREHO43280 583 aa17.05■□□□□ 0.32
CDC42SE1-205ENST00000491825 GTPBP6O43824 516 aaPredicted RBP17.05■□□□□ 0.32
CDC42SE1-205ENST00000491825 RSPH10BP0C881 870 aa17.05■□□□□ 0.32
CDC42SE1-205ENST00000491825 KRT2P35908 639 aa17.05■□□□□ 0.32
CDC42SE1-205ENST00000491825 TFF2Q03403 129 aa17.05■□□□□ 0.32
CDC42SE1-205ENST00000491825 IKBKEQ14164 716 aa17.05■□□□□ 0.32
CDC42SE1-205ENST00000491825 KRT25Q7Z3Z0 450 aa17.05■□□□□ 0.32
CDC42SE1-205ENST00000491825 DBF4BQ8NFT6 615 aa17.05■□□□□ 0.32
CDC42SE1-205ENST00000491825 TNFRSF25Q93038 417 aa17.05■□□□□ 0.32
CDC42SE1-205ENST00000491825 ATP6V0A1Q93050 837 aa17.05■□□□□ 0.32
CDC42SE1-205ENST00000491825 RAD9AQ99638 391 aa17.05■□□□□ 0.32
CDC42SE1-205ENST00000491825 OSBPL7Q9BZF2 842 aa17.05■□□□□ 0.32
CDC42SE1-205ENST00000491825 TRIP12Q14669 1992 aaPredicted RBP17.05■□□□□ 0.32
CDC42SE1-205ENST00000491825 PRRC2BQ5JSZ5 2229 aaKnown RBP17.04■□□□□ 0.32
CDC42SE1-205ENST00000491825 CYP3A4P08684 503 aa17.04■□□□□ 0.32
CDC42SE1-205ENST00000491825 THPOP40225 353 aa17.04■□□□□ 0.32
CDC42SE1-205ENST00000491825 ADAM17P78536 824 aa17.04■□□□□ 0.32
CDC42SE1-205ENST00000491825 ARHGAP4P98171 946 aa17.04■□□□□ 0.32
CDC42SE1-205ENST00000491825 PLEKHG4Q58EX7 1191 aa17.04■□□□□ 0.32
CDC42SE1-205ENST00000491825 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.04■□□□□ 0.32
CDC42SE1-205ENST00000491825 DIS3L2Q8IYB7 885 aaKnown RBP17.04■□□□□ 0.32
CDC42SE1-205ENST00000491825 PGBD1Q96JS3 809 aa17.04■□□□□ 0.32
CDC42SE1-205ENST00000491825 LINC01553A4QN01 128 aa17.03■□□□□ 0.32
CDC42SE1-205ENST00000491825 CAND2O75155 1236 aa17.03■□□□□ 0.32
CDC42SE1-205ENST00000491825 BMP1P13497 986 aa17.03■□□□□ 0.32
CDC42SE1-205ENST00000491825 KCNA2P16389 499 aa17.03■□□□□ 0.32
CDC42SE1-205ENST00000491825 NONOQ15233 471 aaKnown RBP eCLIP17.03■□□□□ 0.32
CDC42SE1-205ENST00000491825 SAFBQ15424 915 aaKnown RBP eCLIP17.03■□□□□ 0.32
CDC42SE1-205ENST00000491825 OXER1Q8TDS5 423 aa17.03■□□□□ 0.32
CDC42SE1-205ENST00000491825 GPRASP2Q96D09 838 aa17.03■□□□□ 0.32
CDC42SE1-205ENST00000491825 UHRF1Q96T88 793 aaPredicted RBP17.03■□□□□ 0.32
CDC42SE1-205ENST00000491825 ZBED2Q9BTP6 218 aa17.03■□□□□ 0.32
CDC42SE1-205ENST00000491825 TSPYL2Q9H2G4 693 aaPredicted RBP17.03■□□□□ 0.32
CDC42SE1-205ENST00000491825 FOXP1Q9H334 677 aaPredicted RBP17.03■□□□□ 0.32
CDC42SE1-205ENST00000491825 SETD4Q9NVD3 440 aa17.03■□□□□ 0.32
CDC42SE1-205ENST00000491825 UBIAD1Q9Y5Z9 338 aa17.03■□□□□ 0.32
CDC42SE1-205ENST00000491825 COL4A4P53420 1690 aaPredicted RBP17.03■□□□□ 0.32
CDC42SE1-205ENST00000491825 ATP9AO75110 1047 aa17.02■□□□□ 0.32
CDC42SE1-205ENST00000491825 ITGB5P18084 799 aa17.02■□□□□ 0.32
CDC42SE1-205ENST00000491825 PDCP20941 246 aa17.02■□□□□ 0.32
CDC42SE1-205ENST00000491825 CIITAP33076 1130 aa17.02■□□□□ 0.32
CDC42SE1-205ENST00000491825 USP11P51784 963 aa17.02■□□□□ 0.32
CDC42SE1-205ENST00000491825 ERVK-21P61565 698 aa17.02■□□□□ 0.32
CDC42SE1-205ENST00000491825 HTRA4P83105 476 aaPredicted RBP17.02■□□□□ 0.32
CDC42SE1-205ENST00000491825 NIPA1Q7RTP0 329 aa17.02■□□□□ 0.32
CDC42SE1-205ENST00000491825 GDPD5Q8WTR4 605 aa17.02■□□□□ 0.32
CDC42SE1-205ENST00000491825 LMBR1Q8WVP7 490 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms