RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 FAM173BQ6P4H8 233 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 BICD2Q8TD16 824 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 LEO1Q8WVC0 666 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-219ENST00000491747 TOX2Q96NM4 488 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 GPR20Q99678 358 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 SENP7Q9BQF6 1050 aa10.6□□□□□ -0.71
BRCA1-219ENST00000491747 PRDM5Q9NQX1 630 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-219ENST00000491747 WDR81Q562E7 1941 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 B4GALT4O60513 344 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 KPNA6O60684 536 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 CLTBP09497 229 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 ZNF165P49910 485 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 FOSBP53539 338 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 SP4Q02446 784 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 ITGB3BPQ13352 177 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-219ENST00000491747 NEDD9Q14511 834 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 METTL7BQ6UX53 244 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 CHRDL2Q6WN34 429 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 PLA2G4DQ86XP0 818 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 C16orf70Q9BSU1 422 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 TRPV6Q9H1D0 765 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 PRO3102Q9H379 93 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 COLQQ9Y215 455 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-219ENST00000491747 SMTNL1A8MU46 457 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 PPFIA4O75335 1185 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 MAGEA10P43363 369 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-219ENST00000491747 ZNF75DP51815 510 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 CHMP4BP1P59074 171 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 MDM2Q00987 491 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-219ENST00000491747 EARS2Q5JPH6 523 aaKnown RBP10.59□□□□□ -0.71
BRCA1-219ENST00000491747 MCTP2Q6DN12 878 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 GDF15Q99988 308 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 AGO4Q9HCK5 861 aaKnown RBP10.59□□□□□ -0.71
BRCA1-219ENST00000491747 TFIP11Q9UBB9 837 aaKnown RBP10.59□□□□□ -0.71
BRCA1-219ENST00000491747 PAXBP1Q9Y5B6 917 aa10.59□□□□□ -0.71
BRCA1-219ENST00000491747 GSTTP1A0A1W2PQM5 241 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 DCDC2CA8MYV0 355 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 RBAK-RBAKDNI3L0D1 243 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 HAS3O00219 553 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 MAFGO15525 162 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 ZNF76P36508 570 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 HIC1Q14526 733 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 TBCKQ8TEA7 893 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 LENG9Q96B70 501 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 ZSCAN16Q9H4T2 348 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-219ENST00000491747 TRMT13Q9NUP7 481 aaKnown RBP10.58□□□□□ -0.72
BRCA1-219ENST00000491747 CFAP45Q9UL16 551 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 TBX21Q9UL17 535 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 FAM205CA6NFA0 338 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 KIAA0355O15063 1070 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 F2P00734 622 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 LGALS2P05162 132 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 CDC25BP30305 580 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 CIITAP33076 1130 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 PSEN2P49810 448 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 GALNT17Q6IS24 598 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 NIPA1Q7RTP0 329 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 TRIM50Q86XT4 487 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 FAM177A1Q8N128 213 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-219ENST00000491747 WASF1Q92558 559 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 BADQ92934 168 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 CDHR1Q96JP9 859 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 C16orf45Q96MC5 204 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-219ENST00000491747 TMEM39AQ9NV64 488 aa10.58□□□□□ -0.72
BRCA1-219ENST00000491747 MROH7Q68CQ1 1323 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 GOLGA6L19H0YKK7 550 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 DHX15O43143 795 aaKnown RBP10.57□□□□□ -0.72
BRCA1-219ENST00000491747 NR1I2O75469 434 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 TNNT1P13805 278 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 NR5A1Q13285 461 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 MFSD10Q14728 455 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 KIAA0753Q2KHM9 967 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 FAM47CQ5HY64 1035 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 NFRKBQ6P4R8 1299 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 TNFRSF25Q93038 417 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 CTAGE1Q96RT6 745 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 LLPHQ9BRT6 129 aaKnown RBP10.57□□□□□ -0.72
BRCA1-219ENST00000491747 HDAC6Q9UBN7 1215 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 UMODL1Q5DID0 1318 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 SCN5AQ14524 2016 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 H3BQV1 296 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 NOP56O00567 594 aaKnown RBP10.57□□□□□ -0.72
BRCA1-219ENST00000491747 NEMFO60524 1076 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 KIF20AO95235 890 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 TDP2O95551 362 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 USP11P51784 963 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 GUCY1B3Q02153 619 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 LRMPQ12912 555 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 INF2Q27J81 1249 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 PRR16Q569H4 304 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 KRT40Q6A162 431 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 GDF6Q6KF10 455 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-219ENST00000491747 GIMAP8Q8ND71 665 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-219ENST00000491747 GJA10Q969M2 543 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 PCYT2Q99447 389 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 DNAJC25Q9H1X3 360 aa10.57□□□□□ -0.72
BRCA1-219ENST00000491747 NFASCO94856 1347 aa10.56□□□□□ -0.72
BRCA1-219ENST00000491747 DDX39AO00148 427 aaKnown RBP10.56□□□□□ -0.72
BRCA1-219ENST00000491747 CCNE2O96020 404 aa10.56□□□□□ -0.72
BRCA1-219ENST00000491747 MMP1P03956 469 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms