RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 FAM177A1Q8N128 213 aaPredicted RBP15.49■□□□□ 0.07
CDK9-204ENST00000491521 BICD2Q8TD16 824 aa15.49■□□□□ 0.07
CDK9-204ENST00000491521 ATP6V0A1Q93050 837 aa15.49■□□□□ 0.07
CDK9-204ENST00000491521 GAS2L1Q99501 681 aaPredicted RBP15.49■□□□□ 0.07
CDK9-204ENST00000491521 EHMT1Q9H9B1 1298 aa15.49■□□□□ 0.07
CDK9-204ENST00000491521 PCDHA4Q9UN74 947 aa15.49■□□□□ 0.07
CDK9-204ENST00000491521 BTBD18B2RXH4 712 aa15.48■□□□□ 0.07
CDK9-204ENST00000491521 ATP9AO75110 1047 aa15.48■□□□□ 0.07
CDK9-204ENST00000491521 ITGB5P18084 799 aa15.48■□□□□ 0.07
CDK9-204ENST00000491521 IGFBP4P22692 258 aa15.48■□□□□ 0.07
CDK9-204ENST00000491521 KCNJ6P48051 423 aa15.48■□□□□ 0.07
CDK9-204ENST00000491521 MTMR1Q13613 665 aa15.48■□□□□ 0.07
CDK9-204ENST00000491521 ZNF618Q5T7W0 954 aa15.48■□□□□ 0.07
CDK9-204ENST00000491521 TMCO2Q7Z6W1 182 aaPredicted RBP15.48■□□□□ 0.07
CDK9-204ENST00000491521 ZMYND12Q9H0C1 365 aa15.48■□□□□ 0.07
CDK9-204ENST00000491521 GLT8D2Q9H1C3 349 aa15.48■□□□□ 0.07
CDK9-204ENST00000491521 RIC8AQ9NPQ8 531 aa15.48■□□□□ 0.07
CDK9-204ENST00000491521 TMEM260Q9NX78 707 aa15.48■□□□□ 0.07
CDK9-204ENST00000491521 PCDHA11Q9Y5I1 949 aa15.48■□□□□ 0.07
CDK9-204ENST00000491521 KAT6AQ92794 2004 aa15.48■□□□□ 0.07
CDK9-204ENST00000491521 TRANK1O15050 2925 aa15.47■□□□□ 0.07
CDK9-204ENST00000491521 REV3LO60673 3130 aa15.47■□□□□ 0.07
CDK9-204ENST00000491521 ESYT2A0FGR8 921 aa15.47■□□□□ 0.07
CDK9-204ENST00000491521 TREHO43280 583 aa15.47■□□□□ 0.07
CDK9-204ENST00000491521 NBNO60934 754 aa15.47■□□□□ 0.07
CDK9-204ENST00000491521 BRD1O95696 1058 aa15.47■□□□□ 0.07
CDK9-204ENST00000491521 CTSHP09668 335 aa15.47■□□□□ 0.07
CDK9-204ENST00000491521 GPNMBQ14956 572 aa15.47■□□□□ 0.07
CDK9-204ENST00000491521 TRIM71Q2Q1W2 868 aaKnown RBP15.47■□□□□ 0.07
CDK9-204ENST00000491521 OXER1Q8TDS5 423 aa15.47■□□□□ 0.07
CDK9-204ENST00000491521 GPRASP2Q96D09 838 aa15.47■□□□□ 0.07
CDK9-204ENST00000491521 ZSCAN16Q9H4T2 348 aaPredicted RBP15.47■□□□□ 0.07
CDK9-204ENST00000491521 CERS4Q9HA82 394 aa15.47■□□□□ 0.07
CDK9-204ENST00000491521 SETD4Q9NVD3 440 aa15.47■□□□□ 0.07
CDK9-204ENST00000491521 ZNF215Q9UL58 517 aaPredicted RBP15.47■□□□□ 0.07
CDK9-204ENST00000491521 ZDHHC9Q9Y397 364 aa15.47■□□□□ 0.07
CDK9-204ENST00000491521 VCANP13611 3396 aa15.47■□□□□ 0.07
CDK9-204ENST00000491521 F13A1P00488 732 aa15.46■□□□□ 0.07
CDK9-204ENST00000491521 CA3P07451 260 aa15.46■□□□□ 0.07
CDK9-204ENST00000491521 KCNA2P16389 499 aa15.46■□□□□ 0.07
CDK9-204ENST00000491521 MARK3P27448 753 aa15.46■□□□□ 0.07
CDK9-204ENST00000491521 TCF7P36402 384 aaPredicted RBP15.46■□□□□ 0.07
CDK9-204ENST00000491521 ARHGAP4P98171 946 aa15.46■□□□□ 0.07
CDK9-204ENST00000491521 NR5A1Q13285 461 aa15.46■□□□□ 0.07
CDK9-204ENST00000491521 CCDC85BQ15834 202 aaPredicted RBP15.46■□□□□ 0.07
CDK9-204ENST00000491521 TCTN1Q2MV58 587 aa15.46■□□□□ 0.07
CDK9-204ENST00000491521 FOXD4L6Q3SYB3 417 aaPredicted RBP15.46■□□□□ 0.07
CDK9-204ENST00000491521 JAKMIP3Q5VZ66 844 aa15.46■□□□□ 0.07
CDK9-204ENST00000491521 FOXD4L3Q6VB84 417 aaPredicted RBP15.46■□□□□ 0.07
CDK9-204ENST00000491521 SERINC5Q86VE9 423 aa15.46■□□□□ 0.07
CDK9-204ENST00000491521 REXO1Q8N1G1 1221 aaKnown RBP15.46■□□□□ 0.07
CDK9-204ENST00000491521 MICALL1Q8N3F8 863 aa15.46■□□□□ 0.07
CDK9-204ENST00000491521 USP38Q8NB14 1042 aa15.46■□□□□ 0.07
CDK9-204ENST00000491521 GIMAP8Q8ND71 665 aaPredicted RBP15.46■□□□□ 0.07
CDK9-204ENST00000491521 CDHR1Q96JP9 859 aa15.46■□□□□ 0.07
CDK9-204ENST00000491521 SLC9A7Q96T83 725 aa15.46■□□□□ 0.07
CDK9-204ENST00000491521 SENP7Q9BQF6 1050 aa15.46■□□□□ 0.07
CDK9-204ENST00000491521 FOXP1Q9H334 677 aaPredicted RBP15.46■□□□□ 0.07
CDK9-204ENST00000491521 RNPEPQ9H4A4 650 aa15.46■□□□□ 0.07
CDK9-204ENST00000491521 UBIAD1Q9Y5Z9 338 aa15.46■□□□□ 0.07
CDK9-204ENST00000491521 PTPRSQ13332 1948 aa15.45■□□□□ 0.06
CDK9-204ENST00000491521 CCDC194A0A1B0GVG4 234 aa15.45■□□□□ 0.06
CDK9-204ENST00000491521 BAIAP3O94812 1187 aa15.45■□□□□ 0.06
CDK9-204ENST00000491521 WDR5P61964 334 aaKnown RBP15.45■□□□□ 0.06
CDK9-204ENST00000491521 RBL2Q08999 1139 aa15.45■□□□□ 0.06
CDK9-204ENST00000491521 ADGRE1Q14246 886 aa15.45■□□□□ 0.06
CDK9-204ENST00000491521 MBTPS1Q14703 1052 aa15.45■□□□□ 0.06
CDK9-204ENST00000491521 FAM117BQ6P1L5 589 aa15.45■□□□□ 0.06
CDK9-204ENST00000491521 CNKSR3Q6P9H4 555 aa15.45■□□□□ 0.06
CDK9-204ENST00000491521 HERC6Q8IVU3 1022 aa15.45■□□□□ 0.06
CDK9-204ENST00000491521 DAGLBQ8NCG7 672 aa15.45■□□□□ 0.06
CDK9-204ENST00000491521 CYP2W1Q8TAV3 490 aa15.45■□□□□ 0.06
CDK9-204ENST00000491521 RASGRP4Q8TDF6 673 aa15.45■□□□□ 0.06
CDK9-204ENST00000491521 GLG1Q92896 1179 aa15.45■□□□□ 0.06
CDK9-204ENST00000491521 UIMC1Q96RL1 719 aa15.45■□□□□ 0.06
CDK9-204ENST00000491521 ZBED2Q9BTP6 218 aa15.45■□□□□ 0.06
CDK9-204ENST00000491521 ANO3Q9BYT9 981 aa15.45■□□□□ 0.06
CDK9-204ENST00000491521 JADE2Q9NQC1 790 aa15.45■□□□□ 0.06
CDK9-204ENST00000491521 RSPH10B2B2RC85 870 aa15.44■□□□□ 0.06
CDK9-204ENST00000491521 KIF28PB7ZC32 967 aa15.44■□□□□ 0.06
CDK9-204ENST00000491521 ADAMTS3O15072 1205 aa15.44■□□□□ 0.06
CDK9-204ENST00000491521 TLL1O43897 1013 aa15.44■□□□□ 0.06
CDK9-204ENST00000491521 RSPH10BP0C881 870 aa15.44■□□□□ 0.06
CDK9-204ENST00000491521 GNAT1P11488 350 aa15.44■□□□□ 0.06
CDK9-204ENST00000491521 U2AF2P26368 475 aaKnown RBP eCLIP15.44■□□□□ 0.061e-7■■□□□ 11.8
CDK9-204ENST00000491521 ZNF76P36508 570 aa15.44■□□□□ 0.06
CDK9-204ENST00000491521 DEFB103AP81534 67 aa15.44■□□□□ 0.06
CDK9-204ENST00000491521 RESTQ13127 1097 aa15.44■□□□□ 0.06
CDK9-204ENST00000491521 NPY5RQ15761 445 aa15.44■□□□□ 0.06
CDK9-204ENST00000491521 MCTP2Q6DN12 878 aa15.44■□□□□ 0.06
CDK9-204ENST00000491521 TRAF7Q6Q0C0 670 aa15.44■□□□□ 0.06
CDK9-204ENST00000491521 NOSTRINQ8IVI9 506 aa15.44■□□□□ 0.06
CDK9-204ENST00000491521 SEPT1Q8WYJ6 367 aa15.44■□□□□ 0.06
CDK9-204ENST00000491521 MXRA8Q9BRK3 442 aa15.44■□□□□ 0.06
CDK9-204ENST00000491521 ATP6V1DQ9Y5K8 247 aa15.44■□□□□ 0.06
CDK9-204ENST00000491521 GSTTP1A0A1W2PQM5 241 aa15.43■□□□□ 0.06
CDK9-204ENST00000491521 DDX39AO00148 427 aaKnown RBP15.43■□□□□ 0.06
CDK9-204ENST00000491521 RFXAPO00287 272 aa15.43■□□□□ 0.06
CDK9-204ENST00000491521 PARNO95453 639 aaKnown RBP15.43■□□□□ 0.06
CDK9-204ENST00000491521 CXCL10P02778 98 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms