RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 FKBP1BP68106 108 aa15.48■□□□□ 0.07
SMPD4-219ENST00000491128 CNNM4Q6P4Q7 775 aa15.48■□□□□ 0.07
SMPD4-219ENST00000491128 NIPA1Q7RTP0 329 aa15.48■□□□□ 0.07
SMPD4-219ENST00000491128 SFR1Q86XK3 245 aa15.48■□□□□ 0.07
SMPD4-219ENST00000491128 SAMD3Q8N6K7 520 aa15.48■□□□□ 0.07
SMPD4-219ENST00000491128 GPRC5AQ8NFJ5 357 aa15.48■□□□□ 0.07
SMPD4-219ENST00000491128 TUFT1Q9NNX1 390 aa15.48■□□□□ 0.07
SMPD4-219ENST00000491128 TBC1D22BQ9NU19 505 aa15.48■□□□□ 0.07
SMPD4-219ENST00000491128 PFASO15067 1338 aa15.48■□□□□ 0.07
SMPD4-219ENST00000491128 LOC285556D6RIA3 1793 aa15.48■□□□□ 0.07
SMPD4-219ENST00000491128 IGF2BP3O00425 579 aaKnown RBP eCLIP15.48■□□□□ 0.07
SMPD4-219ENST00000491128 SWSAP1Q6NVH7 229 aa15.48■□□□□ 0.07
SMPD4-219ENST00000491128 SAPCD2Q86UD0 394 aa15.48■□□□□ 0.07
SMPD4-219ENST00000491128 FBXO16Q8IX29 292 aaPredicted RBP15.48■□□□□ 0.07
SMPD4-219ENST00000491128 KCNF1Q9H3M0 494 aa15.48■□□□□ 0.07
SMPD4-219ENST00000491128 DNAH12Q6ZR08 3092 aa15.48■□□□□ 0.07
SMPD4-219ENST00000491128 PVALEFA0A1B0GWK0 134 aa15.47■□□□□ 0.07
SMPD4-219ENST00000491128 PSMA7O14818 248 aa15.47■□□□□ 0.07
SMPD4-219ENST00000491128 SOX10P56693 466 aa15.47■□□□□ 0.07
SMPD4-219ENST00000491128 KCNA1Q09470 495 aa15.47■□□□□ 0.07
SMPD4-219ENST00000491128 FAM26FQ5R3K3 315 aa15.47■□□□□ 0.07
SMPD4-219ENST00000491128 GPRASP2Q96D09 838 aa15.47■□□□□ 0.07
SMPD4-219ENST00000491128 DUSP9Q99956 384 aaKnown RBP15.47■□□□□ 0.07
SMPD4-219ENST00000491128 VPS16Q9H269 839 aa15.47■□□□□ 0.07
SMPD4-219ENST00000491128 GPBP1L1Q9HC44 474 aaPredicted RBP15.47■□□□□ 0.07
SMPD4-219ENST00000491128 RRAGDQ9NQL2 400 aaPredicted RBP15.47■□□□□ 0.07
SMPD4-219ENST00000491128 GABBR1Q9UBS5 961 aa15.47■□□□□ 0.07
SMPD4-219ENST00000491128 PNMA3Q9UL41 463 aa15.47■□□□□ 0.07
SMPD4-219ENST00000491128 RBAK-RBAKDNI3L0D1 243 aa15.47■□□□□ 0.07
SMPD4-219ENST00000491128 ARIH2O95376 493 aa15.47■□□□□ 0.07
SMPD4-219ENST00000491128 SLC25A27O95847 323 aa15.47■□□□□ 0.07
SMPD4-219ENST00000491128 P4HBP07237 508 aaKnown RBP15.47■□□□□ 0.07
SMPD4-219ENST00000491128 EHHADHQ08426 723 aa15.47■□□□□ 0.07
SMPD4-219ENST00000491128 IRF2BP1Q8IU81 584 aa15.47■□□□□ 0.07
SMPD4-219ENST00000491128 DNERQ8NFT8 737 aa15.47■□□□□ 0.07
SMPD4-219ENST00000491128 MRFAP1L1Q96HT8 127 aa15.47■□□□□ 0.07
SMPD4-219ENST00000491128 JPH1Q9HDC5 661 aaPredicted RBP15.47■□□□□ 0.07
SMPD4-219ENST00000491128 PDGFCQ9NRA1 345 aa15.47■□□□□ 0.07
SMPD4-219ENST00000491128 TAB2Q9NYJ8 693 aa15.47■□□□□ 0.07
SMPD4-219ENST00000491128 SPATA31C2B4DYI2 1134 aa15.46■□□□□ 0.07
SMPD4-219ENST00000491128 PES1O00541 588 aaKnown RBP15.46■□□□□ 0.07
SMPD4-219ENST00000491128 EIF3JO75822 258 aaKnown RBP15.46■□□□□ 0.07
SMPD4-219ENST00000491128 MYBP10242 640 aa15.46■□□□□ 0.07
SMPD4-219ENST00000491128 QARSP47897 775 aaKnown RBP15.46■□□□□ 0.07
SMPD4-219ENST00000491128 STIM1Q13586 685 aa15.46■□□□□ 0.07
SMPD4-219ENST00000491128 GJC2Q5T442 439 aaPredicted RBP15.46■□□□□ 0.07
SMPD4-219ENST00000491128 TTI2Q6NXR4 508 aa15.46■□□□□ 0.07
SMPD4-219ENST00000491128 PAXIP1Q6ZW49 1069 aaPredicted RBP15.46■□□□□ 0.07
SMPD4-219ENST00000491128 RASAL3Q86YV0 1011 aa15.46■□□□□ 0.07
SMPD4-219ENST00000491128 CCDC60Q8IWA6 550 aaPredicted RBP15.46■□□□□ 0.07
SMPD4-219ENST00000491128 CCDC65Q8IXS2 484 aa15.46■□□□□ 0.07
SMPD4-219ENST00000491128 CSGALNACT2Q8N6G5 542 aa15.46■□□□□ 0.07
SMPD4-219ENST00000491128 COPS5Q92905 334 aa15.46■□□□□ 0.07
SMPD4-219ENST00000491128 P2RX5Q93086 422 aa15.46■□□□□ 0.07
SMPD4-219ENST00000491128 NACC1Q96RE7 527 aa15.46■□□□□ 0.07
SMPD4-219ENST00000491128 GPRC5CQ9NQ84 441 aa15.46■□□□□ 0.07
SMPD4-219ENST00000491128 PCDHA2Q9Y5H9 948 aa15.46■□□□□ 0.07
SMPD4-219ENST00000491128 USO1O60763 962 aaKnown RBP15.46■□□□□ 0.07
SMPD4-219ENST00000491128 YWHABP31946 246 aaKnown RBP15.46■□□□□ 0.07
SMPD4-219ENST00000491128 GNPTABQ3T906 1256 aa15.46■□□□□ 0.07
SMPD4-219ENST00000491128 CDKAL1Q5VV42 579 aa15.46■□□□□ 0.07
SMPD4-219ENST00000491128 C1orf186Q6ZWK4 172 aa15.46■□□□□ 0.07
SMPD4-219ENST00000491128 APTXQ7Z2E3 356 aaKnown RBP15.46■□□□□ 0.07
SMPD4-219ENST00000491128 ZSWIM4Q9H7M6 989 aa15.46■□□□□ 0.07
SMPD4-219ENST00000491128 SLC9A2Q9UBY0 812 aa15.46■□□□□ 0.07
SMPD4-219ENST00000491128 ABT1Q9ULW3 272 aaKnown RBP15.46■□□□□ 0.07
SMPD4-219ENST00000491128 ARHGEF35A5YM69 484 aa15.45■□□□□ 0.06
SMPD4-219ENST00000491128 ESPNB1AK53 854 aa15.45■□□□□ 0.06
SMPD4-219ENST00000491128 WDR64B1ANS9 1081 aa15.45■□□□□ 0.06
SMPD4-219ENST00000491128 BACH1O14867 736 aa15.45■□□□□ 0.06
SMPD4-219ENST00000491128 ZNF862O60290 1169 aa15.45■□□□□ 0.06
SMPD4-219ENST00000491128 PRPF6O94906 941 aaKnown RBP15.45■□□□□ 0.06
SMPD4-219ENST00000491128 UBA1P22314 1058 aaKnown RBP15.45■□□□□ 0.06
SMPD4-219ENST00000491128 ADORA2AP29274 412 aa15.45■□□□□ 0.06
SMPD4-219ENST00000491128 NMT1P30419 496 aaKnown RBP15.45■□□□□ 0.06
SMPD4-219ENST00000491128 ACTR2P61160 394 aa15.45■□□□□ 0.06
SMPD4-219ENST00000491128 ZC2HC1CQ53FD0 456 aaPredicted RBP15.45■□□□□ 0.06
SMPD4-219ENST00000491128 MYCT1Q8N699 235 aa15.45■□□□□ 0.06
SMPD4-219ENST00000491128 IWS1Q96ST2 819 aa15.45■□□□□ 0.06
SMPD4-219ENST00000491128 LRRC27Q9C0I9 530 aa15.45■□□□□ 0.06
SMPD4-219ENST00000491128 CEP350Q5VT06 3117 aa15.45■□□□□ 0.06
SMPD4-219ENST00000491128 ZBTB48P10074 688 aaPredicted RBP15.45■□□□□ 0.06
SMPD4-219ENST00000491128 KRT31Q15323 416 aa15.45■□□□□ 0.06
SMPD4-219ENST00000491128 ANKRD23Q86SG2 305 aa15.45■□□□□ 0.06
SMPD4-219ENST00000491128 SCFD1Q8WVM8 642 aa15.45■□□□□ 0.06
SMPD4-219ENST00000491128 ADD3Q9UEY8 706 aaKnown RBP15.45■□□□□ 0.06
SMPD4-219ENST00000491128 PCDHA10Q9Y5I2 948 aa15.45■□□□□ 0.06
SMPD4-219ENST00000491128 LCTP09848 1927 aa15.45■□□□□ 0.06
SMPD4-219ENST00000491128 KCNJ18B7U540 433 aa15.44■□□□□ 0.06
SMPD4-219ENST00000491128 CCNE1P24864 410 aa15.44■□□□□ 0.06
SMPD4-219ENST00000491128 KCNJ12Q14500 433 aa15.44■□□□□ 0.06
SMPD4-219ENST00000491128 XRRA1Q6P2D8 792 aa15.44■□□□□ 0.06
SMPD4-219ENST00000491128 PADI6Q6TGC4 694 aa15.44■□□□□ 0.06
SMPD4-219ENST00000491128 ANO5Q75V66 913 aa15.44■□□□□ 0.06
SMPD4-219ENST00000491128 CACTINQ8WUQ7 758 aaKnown RBP15.44■□□□□ 0.06
SMPD4-219ENST00000491128 MRPL44Q9H9J2 332 aaKnown RBP15.44■□□□□ 0.06
SMPD4-219ENST00000491128 DNAJC25-GNG10A0A024R161 153 aa15.44■□□□□ 0.06
SMPD4-219ENST00000491128 TBCAO75347 108 aaKnown RBP15.44■□□□□ 0.06
SMPD4-219ENST00000491128 KRT76Q01546 638 aa15.44■□□□□ 0.06
SMPD4-219ENST00000491128 MYOCDQ8IZQ8 938 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms