RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 SAMM50Q9Y512 469 aa17.82■□□□□ 0.44
TRA2A-208ENST00000490942 ZNF286BP0CG31 522 aa17.81■□□□□ 0.44
TRA2A-208ENST00000490942 NASPP49321 788 aaPredicted RBP17.81■□□□□ 0.44
TRA2A-208ENST00000490942 SF3A1Q15459 793 aaKnown RBP17.81■□□□□ 0.44
TRA2A-208ENST00000490942 KIAA0753Q2KHM9 967 aa17.81■□□□□ 0.44
TRA2A-208ENST00000490942 DTHD1Q6ZMT9 781 aa17.81■□□□□ 0.44
TRA2A-208ENST00000490942 CCDC60Q8IWA6 550 aaPredicted RBP17.81■□□□□ 0.44
TRA2A-208ENST00000490942 IGSF22Q8N9C0 903 aa17.81■□□□□ 0.44
TRA2A-208ENST00000490942 GJA10Q969M2 543 aa17.81■□□□□ 0.44
TRA2A-208ENST00000490942 VTI1AQ96AJ9 217 aa17.81■□□□□ 0.44
TRA2A-208ENST00000490942 FAM167AQ96KS9 214 aa17.81■□□□□ 0.44
TRA2A-208ENST00000490942 CFAP45Q9UL16 551 aa17.81■□□□□ 0.44
TRA2A-208ENST00000490942 ZDHHC9Q9Y397 364 aa17.81■□□□□ 0.44
TRA2A-208ENST00000490942 TELO2Q9Y4R8 837 aa17.81■□□□□ 0.44
TRA2A-208ENST00000490942 BRCA2P51587 3418 aa17.81■□□□□ 0.44
TRA2A-208ENST00000490942 GRIN2DO15399 1336 aa17.8■□□□□ 0.44
TRA2A-208ENST00000490942 BACH1O14867 736 aa17.8■□□□□ 0.44
TRA2A-208ENST00000490942 P4HBP07237 508 aaKnown RBP17.8■□□□□ 0.44
TRA2A-208ENST00000490942 MUTP22033 750 aa17.8■□□□□ 0.44
TRA2A-208ENST00000490942 HOXC8P31273 242 aa17.8■□□□□ 0.44
TRA2A-208ENST00000490942 PSMC5P62195 406 aa17.8■□□□□ 0.44
TRA2A-208ENST00000490942 PTPAQ15257 358 aa17.8■□□□□ 0.44
TRA2A-208ENST00000490942 NBPF20Q3BBV1 942 aa17.8■□□□□ 0.44
TRA2A-208ENST00000490942 UTP14CQ5TAP6 766 aaKnown RBP17.8■□□□□ 0.44
TRA2A-208ENST00000490942 SWSAP1Q6NVH7 229 aa17.8■□□□□ 0.44
TRA2A-208ENST00000490942 KCTD17Q8N5Z5 321 aa17.8■□□□□ 0.44
TRA2A-208ENST00000490942 ERMNQ8TAM6 284 aa17.8■□□□□ 0.44
TRA2A-208ENST00000490942 AK8Q96MA6 479 aa17.8■□□□□ 0.44
TRA2A-208ENST00000490942 HSD17B14Q9BPX1 270 aa17.8■□□□□ 0.44
TRA2A-208ENST00000490942 DOCK5Q9H7D0 1870 aa17.8■□□□□ 0.44
TRA2A-208ENST00000490942 NRCAMQ92823 1304 aa17.79■□□□□ 0.44
TRA2A-208ENST00000490942 SLC26A4O43511 780 aa17.79■□□□□ 0.44
TRA2A-208ENST00000490942 CHMP2AO43633 222 aa17.79■□□□□ 0.44
TRA2A-208ENST00000490942 LYPLA2O95372 231 aa17.79■□□□□ 0.44
TRA2A-208ENST00000490942 YEATS4O95619 227 aa17.79■□□□□ 0.44
TRA2A-208ENST00000490942 GNAT1P11488 350 aa17.79■□□□□ 0.44
TRA2A-208ENST00000490942 QARSP47897 775 aaKnown RBP17.79■□□□□ 0.44
TRA2A-208ENST00000490942 SLC39A14Q15043 492 aa17.79■□□□□ 0.44
TRA2A-208ENST00000490942 HAUS3Q68CZ6 603 aa17.79■□□□□ 0.44
TRA2A-208ENST00000490942 PDXDC2PQ6P474 469 aa17.79■□□□□ 0.44
TRA2A-208ENST00000490942 C7orf31Q8N865 590 aa17.79■□□□□ 0.44
TRA2A-208ENST00000490942 ATP8B4Q8TF62 1192 aa17.79■□□□□ 0.44
TRA2A-208ENST00000490942 BBXQ8WY36 941 aaPredicted RBP17.79■□□□□ 0.44
TRA2A-208ENST00000490942 UIMC1Q96RL1 719 aa17.79■□□□□ 0.44
TRA2A-208ENST00000490942 USP28Q96RU2 1077 aa17.79■□□□□ 0.44
TRA2A-208ENST00000490942 GABBR1Q9UBS5 961 aa17.79■□□□□ 0.44
TRA2A-208ENST00000490942 GTF2IRD1Q9UHL9 959 aa17.79■□□□□ 0.44
TRA2A-208ENST00000490942 COL1A2P08123 1366 aa17.79■□□□□ 0.44
TRA2A-208ENST00000490942 EML1O00423 815 aa17.78■□□□□ 0.44
TRA2A-208ENST00000490942 HBP1O60381 514 aa17.78■□□□□ 0.44
TRA2A-208ENST00000490942 TECP42680 631 aa17.78■□□□□ 0.44
TRA2A-208ENST00000490942 PSMC6P62333 389 aa17.78■□□□□ 0.44
TRA2A-208ENST00000490942 FAM173BQ6P4H8 233 aa17.78■□□□□ 0.44
TRA2A-208ENST00000490942 TRIM50Q86XT4 487 aa17.78■□□□□ 0.44
TRA2A-208ENST00000490942 C4orf19Q8IY42 314 aa17.78■□□□□ 0.44
TRA2A-208ENST00000490942 IPO9Q96P70 1041 aaKnown RBP17.78■□□□□ 0.44
TRA2A-208ENST00000490942 POLR3CQ9BUI4 534 aaPredicted RBP17.78■□□□□ 0.44
TRA2A-208ENST00000490942 ZSWIM4Q9H7M6 989 aa17.78■□□□□ 0.44
TRA2A-208ENST00000490942 TUFT1Q9NNX1 390 aa17.78■□□□□ 0.44
TRA2A-208ENST00000490942 PPME1Q9Y570 386 aa17.78■□□□□ 0.44
TRA2A-208ENST00000490942 POTEB3A0JP26 581 aa17.77■□□□□ 0.44
TRA2A-208ENST00000490942 RRN3P2A6NIE6 340 aa17.77■□□□□ 0.44
TRA2A-208ENST00000490942 DCDC2CA8MYV0 355 aa17.77■□□□□ 0.44
TRA2A-208ENST00000490942 TLR3O15455 904 aaKnown RBP17.77■□□□□ 0.44
TRA2A-208ENST00000490942 PPP6R2O75170 966 aa17.77■□□□□ 0.44
TRA2A-208ENST00000490942 RPLP2P05387 115 aaKnown RBP17.77■□□□□ 0.44
TRA2A-208ENST00000490942 XRCC6P12956 609 aaKnown RBP eCLIP17.77■□□□□ 0.444e-7■□□□□ 9.8
TRA2A-208ENST00000490942 LONP1P36776 959 aaKnown RBP17.77■□□□□ 0.44
TRA2A-208ENST00000490942 PLCB4Q15147 1175 aa17.77■□□□□ 0.44
TRA2A-208ENST00000490942 LRRC26Q2I0M4 334 aa17.77■□□□□ 0.44
TRA2A-208ENST00000490942 XKR3Q5GH77 459 aa17.77■□□□□ 0.44
TRA2A-208ENST00000490942 NCAPH2Q6IBW4 605 aa17.77■□□□□ 0.44
TRA2A-208ENST00000490942 POTEBQ6S5H4 581 aa17.77■□□□□ 0.44
TRA2A-208ENST00000490942 FAM126BQ8IXS8 530 aa17.77■□□□□ 0.44
TRA2A-208ENST00000490942 LINC00301Q8NCQ3 95 aa17.77■□□□□ 0.44
TRA2A-208ENST00000490942 RNPEPQ9H4A4 650 aa17.77■□□□□ 0.44
TRA2A-208ENST00000490942 NRBP2Q9NSY0 501 aa17.77■□□□□ 0.44
TRA2A-208ENST00000490942 LRWD1Q9UFC0 647 aa17.77■□□□□ 0.44
TRA2A-208ENST00000490942 SRPRBQ9Y5M8 271 aaKnown RBP17.77■□□□□ 0.44
TRA2A-208ENST00000490942 CLIC4Q9Y696 253 aa17.77■□□□□ 0.44
TRA2A-208ENST00000490942 POTEMA6NI47 508 aa17.76■□□□□ 0.43
TRA2A-208ENST00000490942 SLITRK3O94933 977 aa17.76■□□□□ 0.43
TRA2A-208ENST00000490942 CD4P01730 458 aa17.76■□□□□ 0.43
TRA2A-208ENST00000490942 OATP04181 439 aa17.76■□□□□ 0.43
TRA2A-208ENST00000490942 SMIM10L2AP0DMW4 78 aa17.76■□□□□ 0.43
TRA2A-208ENST00000490942 SMIM10L2BP0DMW5 78 aa17.76■□□□□ 0.43
TRA2A-208ENST00000490942 RPA1P27694 616 aa17.76■□□□□ 0.43
TRA2A-208ENST00000490942 ATN1P54259 1190 aaPredicted RBP17.76■□□□□ 0.43
TRA2A-208ENST00000490942 RTP1P59025 263 aa17.76■□□□□ 0.43
TRA2A-208ENST00000490942 ZNF484Q5JVG2 852 aa17.76■□□□□ 0.43
TRA2A-208ENST00000490942 KCNG4Q8TDN1 519 aa17.76■□□□□ 0.43
TRA2A-208ENST00000490942 EIF2AK1Q9BQI3 630 aaKnown RBP17.76■□□□□ 0.43
TRA2A-208ENST00000490942 NIFKQ9BYG3 293 aaKnown RBP17.76■□□□□ 0.43
TRA2A-208ENST00000490942 HDAC6Q9UBN7 1215 aa17.76■□□□□ 0.43
TRA2A-208ENST00000490942 C17orf102A2RUQ5 167 aa17.75■□□□□ 0.43
TRA2A-208ENST00000490942 ZNF862O60290 1169 aa17.75■□□□□ 0.43
TRA2A-208ENST00000490942 ATP4AP20648 1035 aa17.75■□□□□ 0.43
TRA2A-208ENST00000490942 KRT85P78386 507 aa17.75■□□□□ 0.43
TRA2A-208ENST00000490942 ADAM17P78536 824 aa17.75■□□□□ 0.43
TRA2A-208ENST00000490942 PRKCEQ02156 737 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms