RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 FRMD4BQ9Y2L6 1034 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 SMCO2A6NFE2 343 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 LRRC10BA6NIK2 292 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 H7C1W4 665 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 MKRN3Q13064 507 aaKnown RBP12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 ITGB3BPQ13352 177 aaPredicted RBP12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 TMED1Q13445 227 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 TCIRG1Q13488 830 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 BZW1Q7L1Q6 419 aaKnown RBP12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 MFN1Q8IWA4 741 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 CD302Q8IX05 232 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 PARD3BQ8TEW8 1205 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 GRAMD1AQ96CP6 724 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 DYDC2Q96IM9 177 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 TUBB6Q9BUF5 446 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 ALKQ9UM73 1620 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 CPS1P31327 1500 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 DLC1Q96QB1 1528 aa12.23□□□□□ -0.45
CRNKL1-204ENST00000490910 UBE2Q2LH0YL09 131 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 ATF2P15336 505 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 CDK17Q00537 523 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 SLC18A3Q16572 532 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 THEMIS2Q5TEJ8 643 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 B4GALNT2Q8NHY0 566 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 UTYO14607 1347 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 XDHP47989 1333 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 FAM187AA6NFU0 413 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 ARHGAP42A6NI28 874 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 NVLO15381 856 aaKnown RBP12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 PDE8BO95263 885 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 STAMBPO95630 424 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 ECEL1O95672 775 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 PECAM1P16284 738 aaPredicted RBP12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 KLRC1P26715 233 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 IRX4P78413 519 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 TMED2Q15363 201 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 CCDC110Q8TBZ0 833 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 TATDN2Q93075 761 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 ANKRD27Q96NW4 1050 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 SYNCQ9H7C4 482 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 STK17AQ9UEE5 414 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 PP2D1A8MPX8 630 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 RASSF9O75901 435 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 RHOBTB3O94955 611 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 KCNA3P22001 575 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 NR2F2P24468 414 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 KRT28Q7Z3Y7 464 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 SRRM1Q8IYB3 904 aaKnown RBP12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 AGAP11Q8TF27 550 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 NT5C3AQ9H0P0 336 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 POC1B-GALNT4F8VUJ3 575 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 MYBL1P10243 752 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 SERPINB4P48594 390 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 ATG9AQ7Z3C6 839 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 NME8Q8N427 588 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 GRK7Q8WTQ7 553 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 TRIM51Q9BSJ1 452 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 MTA3Q9BTC8 594 aa12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 DIS3Q9Y2L1 958 aaKnown RBP12.22□□□□□ -0.45
CRNKL1-204ENST00000490910 LMTK2Q8IWU2 1503 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 GRIN2DO15399 1336 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 GYG2O15488 501 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 CDR2Q01850 454 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 XRCC4Q13426 336 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 SCARF1Q14162 830 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 MESDQ14696 234 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 DIXDC1Q155Q3 683 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 NAB2Q15742 525 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 ANKRD20A2Q5SQ80 823 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 ANKRD20A1Q5TYW2 823 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 LCORLQ8N3X6 602 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 PNMA1Q8ND90 353 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 METTL14Q9HCE5 456 aaKnown RBP12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 GDF3Q9NR23 364 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 USP40Q9NVE5 1235 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 I3L4J1 428 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 AHCYL1O43865 530 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 BCRP11274 1271 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 FCER1AP12319 257 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 TNFRSF8P28908 595 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 PBX1P40424 430 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 TFAP4Q01664 338 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 ZNF844Q08AG5 666 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 FIGNQ5HY92 759 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 CYP4F22Q6NT55 531 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 GPBP1Q86WP2 473 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 IQCKQ8N0W5 287 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 GIMAP8Q8ND71 665 aaPredicted RBP12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 ANKS1AQ92625 1134 aa12.21□□□□□ -0.45
CRNKL1-204ENST00000490910 hCG_2014768A0A024R1R8 64 aa12.21□□□□□ -0.46
CRNKL1-204ENST00000490910 ESRRAP11474 423 aaPredicted RBP12.21□□□□□ -0.46
CRNKL1-204ENST00000490910 CNGA1P29973 690 aa12.21□□□□□ -0.46
CRNKL1-204ENST00000490910 RFX5P48382 616 aaPredicted RBP12.21□□□□□ -0.46
CRNKL1-204ENST00000490910 ALX1Q15699 326 aa12.21□□□□□ -0.46
CRNKL1-204ENST00000490910 CHRNA2Q15822 529 aa12.21□□□□□ -0.46
CRNKL1-204ENST00000490910 ACCSLQ4AC99 568 aa12.21□□□□□ -0.46
CRNKL1-204ENST00000490910 CAPN12Q6ZSI9 719 aa12.21□□□□□ -0.46
CRNKL1-204ENST00000490910 TMTC3Q6ZXV5 915 aa12.21□□□□□ -0.46
CRNKL1-204ENST00000490910 FAM210AQ96ND0 272 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms