RNA–Protein interactions for RNA: ENST00000490539.1

CSTF1-205, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 5

Gene CSTF1, Length 929 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-205ENST00000490539 SMC4Q9NTJ3 1288 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 GINM1Q9NU53 330 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 TMEM59LQ9UK28 342 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 PCDHB12Q9Y5F1 795 aa5.8□□□□□ -1.48
CSTF1-205ENST00000490539 PTPRCP08575 1304 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 IRS4O14654 1257 aaPredicted RBP5.79□□□□□ -1.48
CSTF1-205ENST00000490539 BBOX1O75936 387 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 GJA8P48165 433 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 SOX9P48436 509 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 PCBP3P57721 371 aaKnown RBP5.79□□□□□ -1.48
CSTF1-205ENST00000490539 DUSP4Q13115 394 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 KCNMB1Q16558 191 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 GAB4Q2WGN9 574 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 CCDC93Q567U6 631 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 SLC10A5Q5PT55 438 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 SLC4A10Q6U841 1118 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 RNF111Q6ZNA4 994 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 OXR1Q8N573 874 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 LINS1Q8NG48 757 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 DNAAF4Q8WXU2 420 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 FAM168AQ92567 244 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 CRAMP1Q96RY5 1269 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 SRRTQ9BXP5 876 aaKnown RBP5.79□□□□□ -1.48
CSTF1-205ENST00000490539 TAOK3Q9H2K8 898 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 FAM53CQ9NYF3 392 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 C9orf78Q9NZ63 289 aaPredicted RBP5.79□□□□□ -1.48
CSTF1-205ENST00000490539 SUCOQ9UBS9 1254 aaKnown RBP5.79□□□□□ -1.48
CSTF1-205ENST00000490539 STRIP2Q9ULQ0 834 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 CTNND2Q9UQB3 1225 aa5.79□□□□□ -1.48
CSTF1-205ENST00000490539 CACNA1FO60840 1977 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 KDM2BQ8NHM5 1336 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 ZNF521Q96K83 1311 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 KIF16BQ96L93 1317 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 BCORQ6W2J9 1755 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 KLRG2A4D1S0 409 aaPredicted RBP5.78□□□□□ -1.48
CSTF1-205ENST00000490539 FAM86C2PA6NEL3 165 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 PDE8AO60658 829 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 NTSR2O95665 410 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 PCCAP05165 728 aaPredicted RBP5.78□□□□□ -1.48
CSTF1-205ENST00000490539 ENDOUP21128 410 aaKnown RBP5.78□□□□□ -1.48
CSTF1-205ENST00000490539 CRY2Q49AN0 593 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 RIC1Q4ADV7 1423 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 CCDC81Q6ZN84 652 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 LRP10Q7Z4F1 713 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 ZSWIM9Q86XI8 627 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 SPPL2CQ8IUH8 684 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 TMEM192Q8IY95 271 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 SUPT20HQ8NEM7 779 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 JDP2Q8WYK2 163 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 FAM89AQ96GI7 184 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 KIRREL1Q96J84 757 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 CDC5LQ99459 802 aaKnown RBP5.78□□□□□ -1.48
CSTF1-205ENST00000490539 ISCA1Q9BUE6 129 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 ACBD3Q9H3P7 528 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 PCDHA11Q9Y5I1 949 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.78□□□□□ -1.48
CSTF1-205ENST00000490539 NUP98P52948 1817 aa5.78□□□□□ -1.48
CSTF1-205ENST00000490539 UBN2Q6ZU65 1347 aa5.77□□□□□ -1.49
CSTF1-205ENST00000490539 AFDNP55196 1824 aaKnown RBP5.77□□□□□ -1.49
CSTF1-205ENST00000490539 KIF13BQ9NQT8 1826 aa5.77□□□□□ -1.49
CSTF1-205ENST00000490539 SIGLEC6O43699 453 aa5.77□□□□□ -1.49
CSTF1-205ENST00000490539 ALDH1L1O75891 902 aa5.77□□□□□ -1.49
CSTF1-205ENST00000490539 KCNA3P22001 575 aa5.77□□□□□ -1.49
CSTF1-205ENST00000490539 NASPP49321 788 aaPredicted RBP5.77□□□□□ -1.49
CSTF1-205ENST00000490539 HK2P52789 917 aa5.77□□□□□ -1.49
CSTF1-205ENST00000490539 PMS1P54277 932 aaKnown RBP5.77□□□□□ -1.49
CSTF1-205ENST00000490539 AUHQ13825 339 aaKnown RBP5.77□□□□□ -1.49
CSTF1-205ENST00000490539 TAF7LQ5H9L4 462 aa5.77□□□□□ -1.49
CSTF1-205ENST00000490539 TMEM67Q5HYA8 995 aa5.77□□□□□ -1.49
CSTF1-205ENST00000490539 NOL9Q5SY16 702 aaKnown RBP5.77□□□□□ -1.49
CSTF1-205ENST00000490539 LSRQ86X29 649 aaPredicted RBP5.77□□□□□ -1.49
CSTF1-205ENST00000490539 KSR1Q8IVT5 923 aa5.77□□□□□ -1.49
CSTF1-205ENST00000490539 ZNF512BQ96KM6 892 aaPredicted RBP5.77□□□□□ -1.49
CSTF1-205ENST00000490539 DSCC1Q9BVC3 393 aa5.77□□□□□ -1.49
CSTF1-205ENST00000490539 API5Q9BZZ5 524 aaKnown RBP5.77□□□□□ -1.49
CSTF1-205ENST00000490539 CHST7Q9NS84 486 aa5.77□□□□□ -1.49
CSTF1-205ENST00000490539 PRR13Q9NZ81 148 aa5.77□□□□□ -1.49
CSTF1-205ENST00000490539 RNF181Q9P0P0 153 aa5.77□□□□□ -1.49
CSTF1-205ENST00000490539 TNRC6CQ9HCJ0 1690 aaKnown RBP5.76□□□□□ -1.49
CSTF1-205ENST00000490539 MKI67P46013 3256 aaKnown RBP5.76□□□□□ -1.49
CSTF1-205ENST00000490539 N4BP2Q86UW6 1770 aaPredicted RBP5.76□□□□□ -1.49
CSTF1-205ENST00000490539 DNAJC25-GNG10A0A024R161 153 aa5.76□□□□□ -1.49
CSTF1-205ENST00000490539 SHISA3A0PJX4 238 aa5.76□□□□□ -1.49
CSTF1-205ENST00000490539 KRTAP9-7A8MTY7 169 aa5.76□□□□□ -1.49
CSTF1-205ENST00000490539 WASH4PA8MWX3 477 aa5.76□□□□□ -1.49
CSTF1-205ENST00000490539 IGHMBP2P38935 993 aaKnown RBP5.76□□□□□ -1.49
CSTF1-205ENST00000490539 CCT4P50991 539 aaKnown RBP5.76□□□□□ -1.49
CSTF1-205ENST00000490539 CHRNEQ04844 493 aa5.76□□□□□ -1.49
CSTF1-205ENST00000490539 GRAPQ13588 217 aa5.76□□□□□ -1.49
CSTF1-205ENST00000490539 GCKRQ14397 625 aa5.76□□□□□ -1.49
CSTF1-205ENST00000490539 TCEAL1Q15170 157 aa5.76□□□□□ -1.49
CSTF1-205ENST00000490539 SF3B3Q15393 1217 aaKnown RBP5.76□□□□□ -1.49
CSTF1-205ENST00000490539 CCDC57Q2TAC2 916 aa5.76□□□□□ -1.49
CSTF1-205ENST00000490539 KRTAP19-4Q3LI73 84 aa5.76□□□□□ -1.49
CSTF1-205ENST00000490539 CWF19L1Q69YN2 538 aaKnown RBP5.76□□□□□ -1.49
CSTF1-205ENST00000490539 MPZL3Q6UWV2 235 aa5.76□□□□□ -1.49
CSTF1-205ENST00000490539 DPP8Q6V1X1 898 aaPredicted RBP5.76□□□□□ -1.49
CSTF1-205ENST00000490539 UNC5AQ6ZN44 842 aa5.76□□□□□ -1.49
CSTF1-205ENST00000490539 UBE3BQ7Z3V4 1068 aa5.76□□□□□ -1.49
CSTF1-205ENST00000490539 ANKRD18AQ8IVF6 992 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms