RNA–Protein interactions for RNA: ENST00000490081.5

HDAC1-210, Transcript of histone deacetylase 1, humanhuman

TSL 3

Gene HDAC1, Length 1,047 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-210ENST00000490081 UBE2Q1Q7Z7E8 422 aa14.03□□□□□ -0.16
HDAC1-210ENST00000490081 KRI1Q8N9T8 703 aaKnown RBP14.03□□□□□ -0.16
HDAC1-210ENST00000490081 ERMNQ8TAM6 284 aa14.03□□□□□ -0.16
HDAC1-210ENST00000490081 TNPO1Q92973 898 aaKnown RBP14.03□□□□□ -0.16
HDAC1-210ENST00000490081 PCYT2Q99447 389 aa14.03□□□□□ -0.16
HDAC1-210ENST00000490081 MTG1Q9BT17 334 aaPredicted RBP14.03□□□□□ -0.16
HDAC1-210ENST00000490081 POLR3CQ9BUI4 534 aaPredicted RBP14.03□□□□□ -0.16
HDAC1-210ENST00000490081 KATNAL1Q9BW62 490 aa14.03□□□□□ -0.16
HDAC1-210ENST00000490081 FTOQ9C0B1 505 aaKnown RBP eCLIP14.03□□□□□ -0.16
HDAC1-210ENST00000490081 TUFT1Q9NNX1 390 aa14.03□□□□□ -0.16
HDAC1-210ENST00000490081 FBXO2Q9UK22 296 aaPredicted RBP14.03□□□□□ -0.16
HDAC1-210ENST00000490081 KAT6AQ92794 2004 aa14.02□□□□□ -0.16
HDAC1-210ENST00000490081 H3BRB1 525 aa14.02□□□□□ -0.17
HDAC1-210ENST00000490081 CUTAO60888 179 aa14.02□□□□□ -0.17
HDAC1-210ENST00000490081 SLITRK3O94933 977 aa14.02□□□□□ -0.17
HDAC1-210ENST00000490081 PTGS1P23219 599 aa14.02□□□□□ -0.17
HDAC1-210ENST00000490081 RPA1P27694 616 aa14.02□□□□□ -0.17
HDAC1-210ENST00000490081 STAT5BP51692 787 aa14.02□□□□□ -0.17
HDAC1-210ENST00000490081 BEX3Q00994 111 aa14.02□□□□□ -0.17
HDAC1-210ENST00000490081 PTPN11Q06124 597 aaPredicted RBP14.02□□□□□ -0.17
HDAC1-210ENST00000490081 HYIQ5T013 277 aa14.02□□□□□ -0.17
HDAC1-210ENST00000490081 SESTD1Q86VW0 696 aa14.02□□□□□ -0.17
HDAC1-210ENST00000490081 C4orf19Q8IY42 314 aa14.02□□□□□ -0.17
HDAC1-210ENST00000490081 SLC43A3Q8NBI5 491 aa14.02□□□□□ -0.17
HDAC1-210ENST00000490081 LEO1Q8WVC0 666 aaPredicted RBP14.02□□□□□ -0.17
HDAC1-210ENST00000490081 KAT2BQ92831 832 aa14.02□□□□□ -0.17
HDAC1-210ENST00000490081 ATP6V0A1Q93050 837 aa14.02□□□□□ -0.17
HDAC1-210ENST00000490081 CCSER1Q9C0I3 900 aa14.02□□□□□ -0.17
HDAC1-210ENST00000490081 TUT1Q9H6E5 874 aaKnown RBP14.02□□□□□ -0.17
HDAC1-210ENST00000490081 AZI2Q9H6S1 392 aa14.02□□□□□ -0.17
HDAC1-210ENST00000490081 ERAP1Q9NZ08 941 aa14.02□□□□□ -0.17
HDAC1-210ENST00000490081 LRWD1Q9UFC0 647 aa14.02□□□□□ -0.17
HDAC1-210ENST00000490081 ZNF215Q9UL58 517 aaPredicted RBP14.02□□□□□ -0.17
HDAC1-210ENST00000490081 TELO2Q9Y4R8 837 aa14.02□□□□□ -0.17
HDAC1-210ENST00000490081 IGSF9BQ9UPX0 1349 aa14.01□□□□□ -0.17
HDAC1-210ENST00000490081 DDX39AO00148 427 aaKnown RBP14.01□□□□□ -0.17
HDAC1-210ENST00000490081 QARSP47897 775 aaKnown RBP14.01□□□□□ -0.17
HDAC1-210ENST00000490081 PSMC5P62195 406 aa14.01□□□□□ -0.17
HDAC1-210ENST00000490081 IRX5P78411 483 aaPredicted RBP14.01□□□□□ -0.17
HDAC1-210ENST00000490081 AXDND1Q5T1B0 1012 aaPredicted RBP14.01□□□□□ -0.17
HDAC1-210ENST00000490081 HAUS3Q68CZ6 603 aa14.01□□□□□ -0.17
HDAC1-210ENST00000490081 ADALQ6DHV7 355 aa14.01□□□□□ -0.17
HDAC1-210ENST00000490081 SWSAP1Q6NVH7 229 aa14.01□□□□□ -0.17
HDAC1-210ENST00000490081 NFRKBQ6P4R8 1299 aa14.01□□□□□ -0.17
HDAC1-210ENST00000490081 CCDC60Q8IWA6 550 aaPredicted RBP14.01□□□□□ -0.17
HDAC1-210ENST00000490081 SPATA32Q96LK8 384 aa14.01□□□□□ -0.17
HDAC1-210ENST00000490081 GLT1D1Q96MS3 346 aa14.01□□□□□ -0.17
HDAC1-210ENST00000490081 EIF2AK1Q9BQI3 630 aaKnown RBP14.01□□□□□ -0.17
HDAC1-210ENST00000490081 ZSWIM4Q9H7M6 989 aa14.01□□□□□ -0.17
HDAC1-210ENST00000490081 ZNF302Q9NR11 478 aa14.01□□□□□ -0.17
HDAC1-210ENST00000490081 SAMM50Q9Y512 469 aa14.01□□□□□ -0.17
HDAC1-210ENST00000490081 PPME1Q9Y570 386 aa14.01□□□□□ -0.17
HDAC1-210ENST00000490081 LOXHD1Q8IVV2 1947 aa14□□□□□ -0.17
HDAC1-210ENST00000490081 A0A1W2PQ45 241 aaPredicted RBP14□□□□□ -0.17
HDAC1-210ENST00000490081 A0A1W2PQY0 241 aa14□□□□□ -0.17
HDAC1-210ENST00000490081 VWA3AA6NCI4 1184 aa14□□□□□ -0.17
HDAC1-210ENST00000490081 POTEMA6NI47 508 aa14□□□□□ -0.17
HDAC1-210ENST00000490081 SPATA31C1P0DKV0 1188 aa14□□□□□ -0.17
HDAC1-210ENST00000490081 MARCKSP29966 332 aaPredicted RBP14□□□□□ -0.17
HDAC1-210ENST00000490081 HOXC8P31273 242 aa14□□□□□ -0.17
HDAC1-210ENST00000490081 CDK7P50613 346 aa14□□□□□ -0.17
HDAC1-210ENST00000490081 CEBPZQ03701 1054 aaKnown RBP14□□□□□ -0.17
HDAC1-210ENST00000490081 SNX17Q15036 470 aa14□□□□□ -0.17
HDAC1-210ENST00000490081 KRT79Q5XKE5 535 aa14□□□□□ -0.17
HDAC1-210ENST00000490081 NCAPH2Q6IBW4 605 aa14□□□□□ -0.17
HDAC1-210ENST00000490081 CATSPER3Q86XQ3 398 aa14□□□□□ -0.17
HDAC1-210ENST00000490081 BBXQ8WY36 941 aaPredicted RBP14□□□□□ -0.17
HDAC1-210ENST00000490081 FAM167AQ96KS9 214 aa14□□□□□ -0.17
HDAC1-210ENST00000490081 UIMC1Q96RL1 719 aa14□□□□□ -0.17
HDAC1-210ENST00000490081 NIFKQ9BYG3 293 aaKnown RBP14□□□□□ -0.17
HDAC1-210ENST00000490081 PCDHA7Q9UN72 937 aa14□□□□□ -0.17
HDAC1-210ENST00000490081 HBP1O60381 514 aa13.99□□□□□ -0.17
HDAC1-210ENST00000490081 STBD1O95210 358 aa13.99□□□□□ -0.17
HDAC1-210ENST00000490081 MYL3P08590 195 aa13.99□□□□□ -0.17
HDAC1-210ENST00000490081 ATP4AP20648 1035 aa13.99□□□□□ -0.17
HDAC1-210ENST00000490081 PSEN2P49810 448 aa13.99□□□□□ -0.17
HDAC1-210ENST00000490081 SP4Q02446 784 aa13.99□□□□□ -0.17
HDAC1-210ENST00000490081 CSPP1Q1MSJ5 1256 aa13.99□□□□□ -0.17
HDAC1-210ENST00000490081 XKR3Q5GH77 459 aa13.99□□□□□ -0.17
HDAC1-210ENST00000490081 HABP4Q5JVS0 413 aaKnown RBP13.99□□□□□ -0.17
HDAC1-210ENST00000490081 CXCL17Q6UXB2 119 aa13.99□□□□□ -0.17
HDAC1-210ENST00000490081 NECAB2Q7Z6G3 386 aa13.99□□□□□ -0.17
HDAC1-210ENST00000490081 TMEM87AQ8NBN3 555 aa13.99□□□□□ -0.17
HDAC1-210ENST00000490081 ATP8B4Q8TF62 1192 aa13.99□□□□□ -0.17
HDAC1-210ENST00000490081 GLG1Q92896 1179 aa13.99□□□□□ -0.17
HDAC1-210ENST00000490081 MMTAG2Q9BU76 263 aaKnown RBP13.99□□□□□ -0.17
HDAC1-210ENST00000490081 NT5C3AQ9H0P0 336 aa13.99□□□□□ -0.17
HDAC1-210ENST00000490081 NRBP2Q9NSY0 501 aa13.99□□□□□ -0.17
HDAC1-210ENST00000490081 PCDH10Q9P2E7 1040 aa13.99□□□□□ -0.17
HDAC1-210ENST00000490081 GABBR1Q9UBS5 961 aa13.99□□□□□ -0.17
HDAC1-210ENST00000490081 COL1A2P08123 1366 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 GRIN2DO15399 1336 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 NRCAMQ92823 1304 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 KDM3AQ9Y4C1 1321 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 FAM237AA0A1B0GTK4 181 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 A0A1W2PQ27 194 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 A0A1W2PQ64 194 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 A0A1W2PQD8 194 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 RRN3P2A6NIE6 340 aa13.98□□□□□ -0.17
HDAC1-210ENST00000490081 BACH1O14867 736 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms