RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 FRMPD2Q68DX3 1309 aaPredicted RBP9.52□□□□□ -0.88
LSAMP-205ENST00000490035 TMEM232C9JQI7 657 aa9.52□□□□□ -0.88
LSAMP-205ENST00000490035 CTNND1O60716 968 aaKnown RBP9.52□□□□□ -0.88
LSAMP-205ENST00000490035 ZFXP17010 805 aaPredicted RBP9.52□□□□□ -0.88
LSAMP-205ENST00000490035 PAPOLAP51003 745 aaKnown RBP9.52□□□□□ -0.88
LSAMP-205ENST00000490035 GOLGA8FQ08AF8 430 aa9.52□□□□□ -0.88
LSAMP-205ENST00000490035 GOLGA8DPQ0D2H9 430 aa9.52□□□□□ -0.88
LSAMP-205ENST00000490035 SCG3Q8WXD2 468 aaKnown RBP9.52□□□□□ -0.88
LSAMP-205ENST00000490035 ALDH8A1Q9H2A2 487 aaPredicted RBP9.52□□□□□ -0.88
LSAMP-205ENST00000490035 SEPT10Q9P0V9 454 aa9.52□□□□□ -0.88
LSAMP-205ENST00000490035 TMCC1O94876 653 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 RWDD2BP57060 319 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 DR1Q01658 176 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 TCP11X2Q5H9J9 407 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 KAZNQ674X7 775 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 SDR42E1Q8WUS8 393 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 KLHL29Q96CT2 875 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 SENP1Q9P0U3 644 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 MED14O60244 1454 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 EXOC1LA0A1B0GW35 172 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 SMIM24O75264 130 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 RSRC2Q7L4I2 434 aaKnown RBP9.52□□□□□ -0.89
LSAMP-205ENST00000490035 DNAAF3Q8N9W5 541 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 MTBPQ96DY7 904 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 RPF1Q9H9Y2 349 aaKnown RBP9.52□□□□□ -0.89
LSAMP-205ENST00000490035 FBXO40Q9UH90 709 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 LOC102724428A0A0B4J2F2 783 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 SPECC1L-ADORA2AF8WAN1 911 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 SIK1P57059 783 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 KLHL38Q2WGJ6 581 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 CATSPER1Q8NEC5 780 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 IL17REQ8NFR9 667 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 MTRQ99707 1265 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 SUGT1Q9Y2Z0 365 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 PCDHA13Q9Y5I0 950 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 KPNA7A9QM74 516 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 ATP1A2P50993 1020 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 DIXDC1Q155Q3 683 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 RCSD1Q6JBY9 416 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 ST13P4Q8IZP2 240 aaPredicted RBP9.52□□□□□ -0.89
LSAMP-205ENST00000490035 PIP4K2CQ8TBX8 421 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 SPDL1Q96EA4 605 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 FAM20AQ96MK3 541 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 TMEM60Q9H2L4 133 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 HEG1Q9ULI3 1381 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 POC1B-GALNT4F8VUJ3 575 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 KRT38O76015 456 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 UNC13DQ70J99 1090 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 CCDC127Q96BQ5 260 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 DESI2Q9BSY9 194 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 CEP72Q9P209 647 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 ERVK-7P63135 1459 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 KIAA0391O15091 583 aaKnown RBP9.52□□□□□ -0.89
LSAMP-205ENST00000490035 SRGAP2CP0DJJ0 459 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 RBL2Q08999 1139 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 MKRN3Q13064 507 aaKnown RBP9.52□□□□□ -0.89
LSAMP-205ENST00000490035 SYDE2Q5VT97 1194 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 RESP18Q5W5W9 173 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 FAM196AQ6ZSG2 479 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 LRRC47Q8N1G4 583 aaKnown RBP9.52□□□□□ -0.89
LSAMP-205ENST00000490035 RNF139Q8WU17 664 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 GLI2P10070 1586 aa9.52□□□□□ -0.89
LSAMP-205ENST00000490035 PYGLP06737 847 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 NR1D1P20393 614 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 DPH5Q9H2P9 285 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 EMILIN3Q9NT22 766 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 SYDE1Q6ZW31 735 aaPredicted RBP9.51□□□□□ -0.89
LSAMP-205ENST00000490035 PYROXD1Q8WU10 500 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 GJA10Q969M2 543 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 ASNSP08243 561 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 CDC42EP1Q00587 391 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 KIF23Q02241 960 aaPredicted RBP9.51□□□□□ -0.89
LSAMP-205ENST00000490035 DMTNQ08495 405 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 GADL1Q6ZQY3 521 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 TMEM179Q6ZVK1 233 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 AKT3Q9Y243 479 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 APOEP02649 317 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 CCT5P48643 541 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 LAMB3Q13751 1172 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 TFDP2Q14188 446 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 DARS2Q6PI48 645 aaKnown RBP9.51□□□□□ -0.89
LSAMP-205ENST00000490035 NDST4Q9H3R1 872 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 SPTLC3Q9NUV7 552 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 KRT16P08779 473 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 SFNP31947 248 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 BCAMP50895 628 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 CDR2Q01850 454 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 IFT88Q13099 833 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 TBCCQ15814 346 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 RTKN2Q8IZC4 609 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 DEPDC1BQ8WUY9 529 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 ZBTB18Q99592 522 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 C2orf40Q9H1Z8 148 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 TBC1D22BQ9NU19 505 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 SLC13A4Q9UKG4 626 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 KRT7P08729 469 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 MX2P20592 715 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 DPP9Q86TI2 863 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 ATP6V1E2Q96A05 226 aa9.51□□□□□ -0.89
LSAMP-205ENST00000490035 COA1Q9GZY4 146 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms