RNA–Protein interactions for RNA: ENST00000489857.5

FAM3D-204, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 3

Gene FAM3D, Length 633 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-204ENST00000489857 ADHFE1Q8IWW8 467 aa17.25■□□□□ 0.35
FAM3D-204ENST00000489857 CMTR1Q8N1G2 835 aaKnown RBP17.25■□□□□ 0.35
FAM3D-204ENST00000489857 MAP4K1Q92918 833 aa17.25■□□□□ 0.35
FAM3D-204ENST00000489857 CDHR1Q96JP9 859 aa17.25■□□□□ 0.35
FAM3D-204ENST00000489857 LZTS2Q9BRK4 669 aa17.25■□□□□ 0.35
FAM3D-204ENST00000489857 AGO3Q9H9G7 860 aaKnown RBP17.25■□□□□ 0.35
FAM3D-204ENST00000489857 UBIAD1Q9Y5Z9 338 aa17.25■□□□□ 0.35
FAM3D-204ENST00000489857 NCK2O43639 380 aa17.24■□□□□ 0.35
FAM3D-204ENST00000489857 DGKIO75912 1065 aa17.24■□□□□ 0.35
FAM3D-204ENST00000489857 CSPG5O95196 566 aa17.24■□□□□ 0.35
FAM3D-204ENST00000489857 CD52P31358 61 aa17.24■□□□□ 0.35
FAM3D-204ENST00000489857 GTF2F1P35269 517 aaKnown RBP eCLIP17.24■□□□□ 0.35
FAM3D-204ENST00000489857 IRS1P35568 1242 aa17.24■□□□□ 0.35
FAM3D-204ENST00000489857 MRPS6P82932 125 aaKnown RBP17.24■□□□□ 0.35
FAM3D-204ENST00000489857 CAMK1Q14012 370 aa17.24■□□□□ 0.35
FAM3D-204ENST00000489857 BTG3Q14201 252 aaPredicted RBP17.24■□□□□ 0.35
FAM3D-204ENST00000489857 UBE2SQ16763 222 aa17.24■□□□□ 0.35
FAM3D-204ENST00000489857 CSPP1Q1MSJ5 1256 aa17.24■□□□□ 0.35
FAM3D-204ENST00000489857 TSHZ1Q6ZSZ6 1077 aa17.24■□□□□ 0.35
FAM3D-204ENST00000489857 GLG1Q92896 1179 aa17.24■□□□□ 0.35
FAM3D-204ENST00000489857 PCYT2Q99447 389 aa17.24■□□□□ 0.35
FAM3D-204ENST00000489857 PSTPIP2Q9H939 334 aa17.24■□□□□ 0.35
FAM3D-204ENST00000489857 RBM8AQ9Y5S9 174 aaKnown RBP17.24■□□□□ 0.35
FAM3D-204ENST00000489857 hCG_1642624A0A1W2PR95 340 aa17.23■□□□□ 0.35
FAM3D-204ENST00000489857 SH2B2O14492 632 aaPredicted RBP17.23■□□□□ 0.35
FAM3D-204ENST00000489857 MBTPS2O43462 519 aa17.23■□□□□ 0.35
FAM3D-204ENST00000489857 PRC1O43663 620 aa17.23■□□□□ 0.35
FAM3D-204ENST00000489857 TBX10O75333 385 aa17.23■□□□□ 0.35
FAM3D-204ENST00000489857 MMP1P03956 469 aa17.23■□□□□ 0.35
FAM3D-204ENST00000489857 RXRAP19793 462 aa17.23■□□□□ 0.35
FAM3D-204ENST00000489857 IGBP1P78318 339 aa17.23■□□□□ 0.35
FAM3D-204ENST00000489857 MTMR1Q13613 665 aa17.23■□□□□ 0.35
FAM3D-204ENST00000489857 SMAD2Q15796 467 aaKnown RBP17.23■□□□□ 0.35
FAM3D-204ENST00000489857 RTN4RL1Q86UN2 441 aaPredicted RBP17.23■□□□□ 0.35
FAM3D-204ENST00000489857 ALYREFQ86V81 257 aaKnown RBP17.23■□□□□ 0.35
FAM3D-204ENST00000489857 CRIPAKQ8N1N5 446 aa17.23■□□□□ 0.35
FAM3D-204ENST00000489857 FAM49AQ9H0Q0 323 aaPredicted RBP17.23■□□□□ 0.35
FAM3D-204ENST00000489857 SMARCAD1Q9H4L7 1026 aa17.23■□□□□ 0.35
FAM3D-204ENST00000489857 ALG13Q9NP73 1137 aaKnown RBP17.23■□□□□ 0.35
FAM3D-204ENST00000489857 MRPL42Q9Y6G3 142 aaKnown RBP17.23■□□□□ 0.35
FAM3D-204ENST00000489857 LINC01565O15544 149 aa17.22■□□□□ 0.35
FAM3D-204ENST00000489857 INSRRP14616 1297 aa17.22■□□□□ 0.35
FAM3D-204ENST00000489857 GNAQP50148 359 aa17.22■□□□□ 0.35
FAM3D-204ENST00000489857 CASC1Q6TDU7 716 aa17.22■□□□□ 0.35
FAM3D-204ENST00000489857 YTHDC1Q96MU7 727 aaKnown RBP17.22■□□□□ 0.35
FAM3D-204ENST00000489857 MTA3Q9BTC8 594 aa17.22■□□□□ 0.35
FAM3D-204ENST00000489857 PLVAPQ9BX97 442 aa17.22■□□□□ 0.35
FAM3D-204ENST00000489857 IGFLR1Q9H665 355 aa17.22■□□□□ 0.35
FAM3D-204ENST00000489857 JADE2Q9NQC1 790 aa17.22■□□□□ 0.35
FAM3D-204ENST00000489857 PLAGL2Q9UPG8 496 aa17.22■□□□□ 0.35
FAM3D-204ENST00000489857 TTC3P53804 2025 aa17.21■□□□□ 0.35
FAM3D-204ENST00000489857 RRN3P2A6NIE6 340 aa17.21■□□□□ 0.35
FAM3D-204ENST00000489857 DNAJB1P25685 340 aa17.21■□□□□ 0.35
FAM3D-204ENST00000489857 SMAD4Q13485 552 aaKnown RBP17.21■□□□□ 0.35
FAM3D-204ENST00000489857 NFXL1Q6ZNB6 911 aa17.21■□□□□ 0.35
FAM3D-204ENST00000489857 RAB11FIP4Q86YS3 637 aa17.21■□□□□ 0.35
FAM3D-204ENST00000489857 PCDHA6Q9UN73 950 aa17.21■□□□□ 0.35
FAM3D-204ENST00000489857 PCDHA8Q9Y5H6 950 aa17.21■□□□□ 0.35
FAM3D-204ENST00000489857 CCDC69A6NI79 296 aa17.2■□□□□ 0.34
FAM3D-204ENST00000489857 SPDYE3A6NKU9 549 aa17.2■□□□□ 0.34
FAM3D-204ENST00000489857 MAFGO15525 162 aa17.2■□□□□ 0.34
FAM3D-204ENST00000489857 ITGB1P05556 798 aa17.2■□□□□ 0.34
FAM3D-204ENST00000489857 TMEM62Q0P6H9 643 aa17.2■□□□□ 0.34
FAM3D-204ENST00000489857 ADAM15Q13444 863 aa17.2■□□□□ 0.34
FAM3D-204ENST00000489857 NPAS4Q8IUM7 802 aa17.2■□□□□ 0.34
FAM3D-204ENST00000489857 CMTR2Q8IYT2 770 aaKnown RBP17.2■□□□□ 0.34
FAM3D-204ENST00000489857 TRAPPC12Q8WVT3 735 aa17.2■□□□□ 0.34
FAM3D-204ENST00000489857 P2RX5Q93086 422 aa17.2■□□□□ 0.34
FAM3D-204ENST00000489857 TMEM87BQ96K49 555 aa17.2■□□□□ 0.34
FAM3D-204ENST00000489857 UPF3BQ9BZI7 483 aaKnown RBP17.2■□□□□ 0.34
FAM3D-204ENST00000489857 JPH1Q9HDC5 661 aaPredicted RBP17.2■□□□□ 0.34
FAM3D-204ENST00000489857 TRPV2Q9Y5S1 764 aa17.2■□□□□ 0.34
FAM3D-204ENST00000489857 SQORQ9Y6N5 450 aa17.2■□□□□ 0.34
FAM3D-204ENST00000489857 KAT6AQ92794 2004 aa17.2■□□□□ 0.34
FAM3D-204ENST00000489857 MCM5P33992 734 aa17.19■□□□□ 0.34
FAM3D-204ENST00000489857 PLCB4Q15147 1175 aa17.19■□□□□ 0.34
FAM3D-204ENST00000489857 IER5Q5VY09 327 aa17.19■□□□□ 0.34
FAM3D-204ENST00000489857 HFE2Q6ZVN8 426 aa17.19■□□□□ 0.34
FAM3D-204ENST00000489857 TMTC3Q6ZXV5 915 aa17.19■□□□□ 0.34
FAM3D-204ENST00000489857 ADGRD2Q7Z7M1 963 aa17.19■□□□□ 0.34
FAM3D-204ENST00000489857 TMTC2Q8N394 836 aa17.19■□□□□ 0.34
FAM3D-204ENST00000489857 CCDC82Q8N4S0 544 aa17.19■□□□□ 0.34
FAM3D-204ENST00000489857 CYP2W1Q8TAV3 490 aa17.19■□□□□ 0.34
FAM3D-204ENST00000489857 SPPL3Q8TCT6 385 aa17.19■□□□□ 0.34
FAM3D-204ENST00000489857 MSLNLQ96KJ4 702 aa17.19■□□□□ 0.34
FAM3D-204ENST00000489857 POP1Q99575 1024 aaKnown RBP17.19■□□□□ 0.34
FAM3D-204ENST00000489857 FTHL17Q9BXU8 183 aa17.19■□□□□ 0.34
FAM3D-204ENST00000489857 KCNH7Q9NS40 1196 aa17.19■□□□□ 0.34
FAM3D-204ENST00000489857 SLC9A2Q9UBY0 812 aa17.19■□□□□ 0.34
FAM3D-204ENST00000489857 MUTYHQ9UIF7 546 aa17.19■□□□□ 0.34
FAM3D-204ENST00000489857 CD207Q9UJ71 328 aa17.19■□□□□ 0.34
FAM3D-204ENST00000489857 PADI3Q9ULW8 664 aa17.19■□□□□ 0.34
FAM3D-204ENST00000489857 TRPC6Q9Y210 931 aa17.19■□□□□ 0.34
FAM3D-204ENST00000489857 IGSF9BQ9UPX0 1349 aa17.19■□□□□ 0.34
FAM3D-204ENST00000489857 RPLP2P05387 115 aaKnown RBP17.18■□□□□ 0.34
FAM3D-204ENST00000489857 CALM1P0DP23 149 aa17.18■□□□□ 0.34
FAM3D-204ENST00000489857 CALM2P0DP24 149 aa17.18■□□□□ 0.34
FAM3D-204ENST00000489857 CALM3P0DP25 149 aa17.18■□□□□ 0.34
FAM3D-204ENST00000489857 LIFRP42702 1097 aa17.18■□□□□ 0.34
FAM3D-204ENST00000489857 GATMP50440 423 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms