RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 KPNA6O60684 536 aa9.33□□□□□ -0.92
SF1-218ENST00000489544 PQBP1O60828 265 aaKnown RBP9.33□□□□□ -0.92
SF1-218ENST00000489544 LGR5O75473 907 aa9.33□□□□□ -0.92
SF1-218ENST00000489544 MARCKSP29966 332 aaPredicted RBP9.33□□□□□ -0.92
SF1-218ENST00000489544 CDC25AP30304 524 aa9.33□□□□□ -0.92
SF1-218ENST00000489544 STAT5BP51692 787 aa9.33□□□□□ -0.92
SF1-218ENST00000489544 RTP1P59025 263 aa9.33□□□□□ -0.92
SF1-218ENST00000489544 ATP2C1P98194 919 aaPredicted RBP9.33□□□□□ -0.92
SF1-218ENST00000489544 CYP4A11Q02928 519 aa9.33□□□□□ -0.92
SF1-218ENST00000489544 DNM1Q05193 864 aaKnown RBP9.33□□□□□ -0.92
SF1-218ENST00000489544 PPP2R5CQ13362 524 aa9.33□□□□□ -0.92
SF1-218ENST00000489544 PTPAQ15257 358 aa9.33□□□□□ -0.92
SF1-218ENST00000489544 TRIM60Q495X7 471 aa9.33□□□□□ -0.92
SF1-218ENST00000489544 PDXDC2PQ6P474 469 aa9.33□□□□□ -0.92
SF1-218ENST00000489544 SLFN12Q8IYM2 578 aa9.33□□□□□ -0.92
SF1-218ENST00000489544 DYDC2Q96IM9 177 aa9.33□□□□□ -0.92
SF1-218ENST00000489544 SH2D3AQ9BRG2 576 aa9.33□□□□□ -0.92
SF1-218ENST00000489544 TRPV6Q9H1D0 765 aa9.33□□□□□ -0.92
SF1-218ENST00000489544 TUT1Q9H6E5 874 aaKnown RBP9.33□□□□□ -0.92
SF1-218ENST00000489544 ZNF302Q9NR11 478 aa9.33□□□□□ -0.92
SF1-218ENST00000489544 WRAP73Q9P2S5 460 aaPredicted RBP9.33□□□□□ -0.92
SF1-218ENST00000489544 HDAC6Q9UBN7 1215 aa9.33□□□□□ -0.92
SF1-218ENST00000489544 TCEAL9Q9UHQ7 104 aa9.33□□□□□ -0.92
SF1-218ENST00000489544 ATP11BQ9Y2G3 1177 aa9.33□□□□□ -0.92
SF1-218ENST00000489544 PCDHA10Q9Y5I2 948 aa9.33□□□□□ -0.92
SF1-218ENST00000489544 EMSYQ7Z589 1322 aa9.32□□□□□ -0.92
SF1-218ENST00000489544 VWA3AA6NCI4 1184 aa9.32□□□□□ -0.92
SF1-218ENST00000489544 ARVCFO00192 962 aa9.32□□□□□ -0.92
SF1-218ENST00000489544 ZBTB39O15060 712 aa9.32□□□□□ -0.92
SF1-218ENST00000489544 CABYRO75952 493 aa9.32□□□□□ -0.92
SF1-218ENST00000489544 PSAPP07602 524 aa9.32□□□□□ -0.92
SF1-218ENST00000489544 SMIM10L2AP0DMW4 78 aa9.32□□□□□ -0.92
SF1-218ENST00000489544 SMIM10L2BP0DMW5 78 aa9.32□□□□□ -0.92
SF1-218ENST00000489544 CDK7P50613 346 aa9.32□□□□□ -0.92
SF1-218ENST00000489544 JAK3P52333 1124 aa9.32□□□□□ -0.92
SF1-218ENST00000489544 TLE2Q04725 743 aa9.32□□□□□ -0.92
SF1-218ENST00000489544 ORC2Q13416 577 aaPredicted RBP9.32□□□□□ -0.92
SF1-218ENST00000489544 CTTNQ14247 550 aaKnown RBP9.32□□□□□ -0.92
SF1-218ENST00000489544 PLCB4Q15147 1175 aa9.32□□□□□ -0.92
SF1-218ENST00000489544 SPECC1Q5M775 1068 aa9.32□□□□□ -0.92
SF1-218ENST00000489544 GDF6Q6KF10 455 aaPredicted RBP9.32□□□□□ -0.92
SF1-218ENST00000489544 SMAP1Q8IYB5 467 aaPredicted RBP9.32□□□□□ -0.92
SF1-218ENST00000489544 SLC43A3Q8NBI5 491 aa9.32□□□□□ -0.92
SF1-218ENST00000489544 TRAPPC12Q8WVT3 735 aa9.32□□□□□ -0.92
SF1-218ENST00000489544 CLIC6Q96NY7 704 aa9.32□□□□□ -0.92
SF1-218ENST00000489544 EIF2AK1Q9BQI3 630 aaKnown RBP9.32□□□□□ -0.92
SF1-218ENST00000489544 SMARCAD1Q9H4L7 1026 aa9.32□□□□□ -0.92
SF1-218ENST00000489544 AZI2Q9H6S1 392 aa9.32□□□□□ -0.92
SF1-218ENST00000489544 TRMT13Q9NUP7 481 aaKnown RBP9.32□□□□□ -0.92
SF1-218ENST00000489544 SETD4Q9NVD3 440 aa9.32□□□□□ -0.92
SF1-218ENST00000489544 IGSF9BQ9UPX0 1349 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 B4GALT4O60513 344 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 MED24O75448 989 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 SLITRK3O94933 977 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 STBD1O95210 358 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 CYP2C9P11712 490 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 INSRRP14616 1297 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 SFNP31947 248 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 IGBP1P78318 339 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 PRKCEQ02156 737 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 SNX17Q15036 470 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 EPHA7Q15375 998 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 ECM1Q16610 540 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 FAM160B1Q5W0V3 765 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 DTHD1Q6ZMT9 781 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 PLPPR4Q7Z2D5 763 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 SH3RF1Q7Z6J0 888 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 TPH2Q8IWU9 490 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 FAM126BQ8IXS8 530 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 CKAP2LQ8IYA6 745 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 C7orf61Q8IZ16 206 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 C7orf31Q8N865 590 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 AFAP1L1Q8TED9 768 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 IPO9Q96P70 1041 aaKnown RBP9.31□□□□□ -0.92
SF1-218ENST00000489544 CTAGE1Q96RT6 745 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 LXNQ9BS40 222 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 KATNAL1Q9BW62 490 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 ERAP1Q9NZ08 941 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 ZNF215Q9UL58 517 aaPredicted RBP9.31□□□□□ -0.92
SF1-218ENST00000489544 TRPC6Q9Y210 931 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 MAFBQ9Y5Q3 323 aaPredicted RBP9.31□□□□□ -0.92
SF1-218ENST00000489544 SCN10AQ9Y5Y9 1956 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 DNAH12Q6ZR08 3092 aa9.31□□□□□ -0.92
SF1-218ENST00000489544 POTEB3A0JP26 581 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 LAD1O00515 517 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 TREHO43280 583 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 ABCB7O75027 752 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 P4HBP07237 508 aaKnown RBP9.3□□□□□ -0.92
SF1-218ENST00000489544 SPATA31C1P0DKV0 1188 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 PDIA4P13667 645 aaKnown RBP9.3□□□□□ -0.92
SF1-218ENST00000489544 CAPN2P17655 700 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 NCLP19338 710 aaKnown RBP9.3□□□□□ -0.92
SF1-218ENST00000489544 PRPHP41219 470 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 QARSP47897 775 aaKnown RBP9.3□□□□□ -0.92
SF1-218ENST00000489544 NASPP49321 788 aaPredicted RBP9.3□□□□□ -0.92
SF1-218ENST00000489544 FXR2P51116 673 aaKnown RBP eCLIP9.3□□□□□ -0.922e-6■□□□□ 10
SF1-218ENST00000489544 NUCB2P80303 420 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 FAAP100Q0VG06 881 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 PPFIA1Q13136 1202 aa9.3□□□□□ -0.92
SF1-218ENST00000489544 SLC39A14Q15043 492 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms