RNA–Protein interactions for RNA: ENST00000488914.1

CTNNB1-215, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-215ENST00000488914 OSTM1Q86WC4 334 aa6.82□□□□□ -1.32
CTNNB1-215ENST00000488914 TICAM2Q86XR7 235 aa6.82□□□□□ -1.32
CTNNB1-215ENST00000488914 SCUBE1Q8IWY4 988 aa6.82□□□□□ -1.32
CTNNB1-215ENST00000488914 FAM177A1Q8N128 213 aaPredicted RBP6.82□□□□□ -1.32
CTNNB1-215ENST00000488914 ZBTB38Q8NAP3 1195 aaPredicted RBP6.82□□□□□ -1.32
CTNNB1-215ENST00000488914 CDC6Q99741 560 aa6.82□□□□□ -1.32
CTNNB1-215ENST00000488914 CBLCQ9ULV8 474 aa6.82□□□□□ -1.32
CTNNB1-215ENST00000488914 MAN2B1O00754 1011 aa6.81□□□□□ -1.32
CTNNB1-215ENST00000488914 KCNK3O14649 394 aa6.81□□□□□ -1.32
CTNNB1-215ENST00000488914 U2SURPO15042 1029 aaKnown RBP6.81□□□□□ -1.32
CTNNB1-215ENST00000488914 PYGMP11217 842 aa6.81□□□□□ -1.32
CTNNB1-215ENST00000488914 CSF2RBP32927 897 aa6.81□□□□□ -1.32
CTNNB1-215ENST00000488914 PAK1Q13153 545 aa6.81□□□□□ -1.32
CTNNB1-215ENST00000488914 BTBD8Q5XKL5 378 aa6.81□□□□□ -1.32
CTNNB1-215ENST00000488914 ZNF585AQ6P3V2 769 aa6.81□□□□□ -1.32
CTNNB1-215ENST00000488914 MTDHQ86UE4 582 aaKnown RBP6.81□□□□□ -1.32
CTNNB1-215ENST00000488914 CIR1Q86X95 450 aaPredicted RBP6.81□□□□□ -1.32
CTNNB1-215ENST00000488914 PTRH1Q86Y79 214 aaKnown RBP6.81□□□□□ -1.32
CTNNB1-215ENST00000488914 PTPRN2Q92932 1015 aa6.81□□□□□ -1.32
CTNNB1-215ENST00000488914 GNRHR2Q96P88 292 aa6.81□□□□□ -1.32
CTNNB1-215ENST00000488914 CCDC113Q9H0I3 377 aa6.81□□□□□ -1.32
CTNNB1-215ENST00000488914 PPP1R1BQ9UD71 204 aaPredicted RBP6.81□□□□□ -1.32
CTNNB1-215ENST00000488914 PCDHA9Q9Y5H5 950 aa6.81□□□□□ -1.32
CTNNB1-215ENST00000488914 CLSTN1O94985 981 aa6.8□□□□□ -1.32
CTNNB1-215ENST00000488914 ZNF888P0CJ79 500 aaPredicted RBP6.8□□□□□ -1.32
CTNNB1-215ENST00000488914 SRGAP2CP0DJJ0 459 aa6.8□□□□□ -1.32
CTNNB1-215ENST00000488914 PDE6AP16499 860 aa6.8□□□□□ -1.32
CTNNB1-215ENST00000488914 KRT15P19012 456 aa6.8□□□□□ -1.32
CTNNB1-215ENST00000488914 JAM2P57087 298 aa6.8□□□□□ -1.32
CTNNB1-215ENST00000488914 ZXDAP98168 799 aa6.8□□□□□ -1.32
CTNNB1-215ENST00000488914 DBPQ10586 325 aaPredicted RBP6.8□□□□□ -1.32
CTNNB1-215ENST00000488914 SH3RF3Q8TEJ3 882 aaPredicted RBP6.8□□□□□ -1.32
CTNNB1-215ENST00000488914 AJUBAQ96IF1 538 aa6.8□□□□□ -1.32
CTNNB1-215ENST00000488914 TANGO6Q9C0B7 1094 aa6.8□□□□□ -1.32
CTNNB1-215ENST00000488914 KLC2Q9H0B6 622 aa6.8□□□□□ -1.32
CTNNB1-215ENST00000488914 CATSPERZQ9NTU4 200 aa6.8□□□□□ -1.32
CTNNB1-215ENST00000488914 SRPK3Q9UPE1 567 aa6.8□□□□□ -1.32
CTNNB1-215ENST00000488914 NUB1Q9Y5A7 615 aa6.8□□□□□ -1.32
CTNNB1-215ENST00000488914 FAM221BA6H8Z2 402 aa6.79□□□□□ -1.32
CTNNB1-215ENST00000488914 ARVCFO00192 962 aa6.79□□□□□ -1.32
CTNNB1-215ENST00000488914 AQP7O14520 342 aa6.79□□□□□ -1.32
CTNNB1-215ENST00000488914 WNT9AO14904 365 aa6.79□□□□□ -1.32
CTNNB1-215ENST00000488914 PTPN1P18031 435 aaKnown RBP6.79□□□□□ -1.32
CTNNB1-215ENST00000488914 GUCY1A3Q02108 690 aa6.79□□□□□ -1.32
CTNNB1-215ENST00000488914 GPR19Q15760 415 aa6.79□□□□□ -1.32
CTNNB1-215ENST00000488914 SLFN13Q68D06 897 aa6.79□□□□□ -1.32
CTNNB1-215ENST00000488914 MAMDC2Q7Z304 686 aaPredicted RBP6.79□□□□□ -1.32
CTNNB1-215ENST00000488914 RALYLQ86SE5 291 aaKnown RBP6.79□□□□□ -1.32
CTNNB1-215ENST00000488914 PALM2Q8IXS6 379 aa6.79□□□□□ -1.32
CTNNB1-215ENST00000488914 PKNOX2Q96KN3 472 aa6.79□□□□□ -1.32
CTNNB1-215ENST00000488914 RIC8BQ9NVN3 520 aa6.79□□□□□ -1.32
CTNNB1-215ENST00000488914 PATE3B3GLJ2 98 aa6.78□□□□□ -1.32
CTNNB1-215ENST00000488914 H0Y858 1186 aa6.78□□□□□ -1.32
CTNNB1-215ENST00000488914 CHGBP05060 677 aa6.78□□□□□ -1.32
CTNNB1-215ENST00000488914 ATP2B1P20020 1258 aa6.78□□□□□ -1.32
CTNNB1-215ENST00000488914 SUMO1P63165 101 aaKnown RBP6.78□□□□□ -1.32
CTNNB1-215ENST00000488914 DPH6Q7L8W6 267 aa6.78□□□□□ -1.32
CTNNB1-215ENST00000488914 FBXW5Q969U6 566 aa6.78□□□□□ -1.32
CTNNB1-215ENST00000488914 PSMD1Q99460 953 aa6.78□□□□□ -1.32
CTNNB1-215ENST00000488914 KATNBL1Q9H079 304 aa6.78□□□□□ -1.32
CTNNB1-215ENST00000488914 TSC22D4Q9Y3Q8 395 aa6.78□□□□□ -1.32
CTNNB1-215ENST00000488914 SLC4A7Q9Y6M7 1214 aa6.78□□□□□ -1.32
CTNNB1-215ENST00000488914 KDM2BQ8NHM5 1336 aa6.77□□□□□ -1.32
CTNNB1-215ENST00000488914 ESYT3A0FGR9 886 aa6.77□□□□□ -1.33
CTNNB1-215ENST00000488914 AKAP8O43823 692 aaKnown RBP6.77□□□□□ -1.33
CTNNB1-215ENST00000488914 CRTAMO95727 393 aa6.77□□□□□ -1.33
CTNNB1-215ENST00000488914 GTF2F1P35269 517 aaKnown RBP eCLIP6.77□□□□□ -1.33
CTNNB1-215ENST00000488914 SERINC3Q13530 473 aa6.77□□□□□ -1.33
CTNNB1-215ENST00000488914 NOLC1Q14978 699 aaKnown RBP eCLIP6.77□□□□□ -1.334e-8■■□□□ 13
CTNNB1-215ENST00000488914 R3HDM1Q15032 1099 aaKnown RBP6.77□□□□□ -1.33
CTNNB1-215ENST00000488914 SEC23AQ15436 765 aa6.77□□□□□ -1.33
CTNNB1-215ENST00000488914 Q8TCH9 128 aa6.77□□□□□ -1.33
CTNNB1-215ENST00000488914 KISS1RQ969F8 398 aaPredicted RBP6.77□□□□□ -1.33
CTNNB1-215ENST00000488914 LRRC37BQ96QE4 947 aa6.77□□□□□ -1.33
CTNNB1-215ENST00000488914 DHRS4Q9BTZ2 278 aa6.77□□□□□ -1.33
CTNNB1-215ENST00000488914 DEF6Q9H4E7 631 aa6.77□□□□□ -1.33
CTNNB1-215ENST00000488914 SMURF1Q9HCE7 757 aa6.77□□□□□ -1.33
CTNNB1-215ENST00000488914 ZNF561-AS1K7EIQ3 104 aa6.76□□□□□ -1.33
CTNNB1-215ENST00000488914 FOXS1O43638 330 aa6.76□□□□□ -1.33
CTNNB1-215ENST00000488914 ZNF623O75123 536 aa6.76□□□□□ -1.33
CTNNB1-215ENST00000488914 MC4RP32245 332 aa6.76□□□□□ -1.33
CTNNB1-215ENST00000488914 DNM2P50570 870 aa6.76□□□□□ -1.33
CTNNB1-215ENST00000488914 RASA3Q14644 834 aa6.76□□□□□ -1.33
CTNNB1-215ENST00000488914 FSTL4Q6MZW2 842 aa6.76□□□□□ -1.33
CTNNB1-215ENST00000488914 C16orf59Q7L2K0 433 aa6.76□□□□□ -1.33
CTNNB1-215ENST00000488914 NLGN4XQ8N0W4 816 aa6.76□□□□□ -1.33
CTNNB1-215ENST00000488914 Q8N1X5 172 aa6.76□□□□□ -1.33
CTNNB1-215ENST00000488914 SIRPGQ9P1W8 387 aa6.76□□□□□ -1.33
CTNNB1-215ENST00000488914 MRPS23Q9Y3D9 190 aaKnown RBP6.76□□□□□ -1.33
CTNNB1-215ENST00000488914 ATP23Q9Y6H3 246 aa6.76□□□□□ -1.33
CTNNB1-215ENST00000488914 CCDC66A2RUB6 948 aa6.75□□□□□ -1.33
CTNNB1-215ENST00000488914 FSHBP01225 129 aa6.75□□□□□ -1.33
CTNNB1-215ENST00000488914 C4BPAP04003 597 aaKnown RBP6.75□□□□□ -1.33
CTNNB1-215ENST00000488914 TM4SF20Q53R12 229 aa6.75□□□□□ -1.33
CTNNB1-215ENST00000488914 TCTN3Q6NUS6 607 aa6.75□□□□□ -1.33
CTNNB1-215ENST00000488914 LMF1Q96S06 567 aa6.75□□□□□ -1.33
CTNNB1-215ENST00000488914 SLC52A2Q9HAB3 445 aa6.75□□□□□ -1.33
CTNNB1-215ENST00000488914 PPM1GO15355 546 aaPredicted RBP6.74□□□□□ -1.33
CTNNB1-215ENST00000488914 POLD1P28340 1107 aa6.74□□□□□ -1.33
CTNNB1-215ENST00000488914 RRADP55042 308 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms