RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 CALCRLQ16602 461 aa10□□□□□ -0.81
SMKR1-202ENST00000488846 UTP14CQ5TAP6 766 aaKnown RBP10□□□□□ -0.81
SMKR1-202ENST00000488846 GDF6Q6KF10 455 aaPredicted RBP10□□□□□ -0.81
SMKR1-202ENST00000488846 SWSAP1Q6NVH7 229 aa10□□□□□ -0.81
SMKR1-202ENST00000488846 SH3RF1Q7Z6J0 888 aa10□□□□□ -0.81
SMKR1-202ENST00000488846 C7orf61Q8IZ16 206 aa10□□□□□ -0.81
SMKR1-202ENST00000488846 C7orf31Q8N865 590 aa10□□□□□ -0.81
SMKR1-202ENST00000488846 UIMC1Q96RL1 719 aa10□□□□□ -0.81
SMKR1-202ENST00000488846 TRPV6Q9H1D0 765 aa10□□□□□ -0.81
SMKR1-202ENST00000488846 AZI2Q9H6S1 392 aa10□□□□□ -0.81
SMKR1-202ENST00000488846 EIF4ENIF1Q9NRA8 985 aaKnown RBP10□□□□□ -0.81
SMKR1-202ENST00000488846 TRMT13Q9NUP7 481 aaKnown RBP10□□□□□ -0.81
SMKR1-202ENST00000488846 HDAC6Q9UBN7 1215 aa10□□□□□ -0.81
SMKR1-202ENST00000488846 PCDHA12Q9UN75 941 aa10□□□□□ -0.81
SMKR1-202ENST00000488846 PCDHB6Q9Y5E3 794 aa10□□□□□ -0.81
SMKR1-202ENST00000488846 NRCAMQ92823 1304 aa10□□□□□ -0.81
SMKR1-202ENST00000488846 WDR81Q562E7 1941 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 LTBP2Q14767 1821 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 MBLAC1A4D2B0 266 aaPredicted RBP9.99□□□□□ -0.81
SMKR1-202ENST00000488846 EML1O00423 815 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 ZNF862O60290 1169 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 TIMP1P01033 207 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 ITGB8P26012 769 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 MCM7P33993 719 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 PRPHP41219 470 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 RESTQ13127 1097 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 PLCB4Q15147 1175 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 EPHA7Q15375 998 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 ZNF174Q15697 407 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 MARCH8Q5T0T0 291 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 FAM160B1Q5W0V3 765 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 MCTP1Q6DN14 999 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 MIER3Q7Z3K6 550 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 SERINC5Q86VE9 423 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 ATP8B4Q8TF62 1192 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 GLG1Q92896 1179 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 PRO3102Q9H379 93 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 ZNF302Q9NR11 478 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 TMEM39AQ9NV64 488 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 TCEAL9Q9UHQ7 104 aa9.99□□□□□ -0.81
SMKR1-202ENST00000488846 MORC2Q9Y6X9 1032 aaPredicted RBP9.99□□□□□ -0.81
SMKR1-202ENST00000488846 LAMA3Q16787 3333 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 POTEB3A0JP26 581 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 C17orf102A2RUQ5 167 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 VPS37CA5D8V6 355 aaPredicted RBP9.98□□□□□ -0.81
SMKR1-202ENST00000488846 RRN3P2A6NIE6 340 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 ZBTB42B2RXF5 422 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 H0YGN5 161 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 PITPNM1O00562 1244 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 HBP1O60381 514 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 STBD1O95210 358 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 P4HBP07237 508 aaKnown RBP9.98□□□□□ -0.81
SMKR1-202ENST00000488846 OR52Z1P0C646 297 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 GNAT1P11488 350 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 FXR2P51116 673 aaKnown RBP eCLIP9.98□□□□□ -0.81
SMKR1-202ENST00000488846 ATP2C1P98194 919 aaPredicted RBP9.98□□□□□ -0.81
SMKR1-202ENST00000488846 PTGDRQ13258 359 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 PTK7Q13308 1070 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 BECN1Q14457 450 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 NBR1Q14596 966 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 PTGISQ16647 500 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 UGCGQ16739 394 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 TRIM71Q2Q1W2 868 aaKnown RBP9.98□□□□□ -0.81
SMKR1-202ENST00000488846 PRPF38BQ5VTL8 546 aaKnown RBP9.98□□□□□ -0.81
SMKR1-202ENST00000488846 PDXDC2PQ6P474 469 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 POTEBQ6S5H4 581 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 RPAINQ86UA6 219 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 CAGE1Q8TC20 777 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 PPP1R13LQ8WUF5 828 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 LMBR1Q8WVP7 490 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 BBXQ8WY36 941 aaPredicted RBP9.98□□□□□ -0.81
SMKR1-202ENST00000488846 DHX38Q92620 1227 aaKnown RBP9.98□□□□□ -0.81
SMKR1-202ENST00000488846 TNPO1Q92973 898 aaKnown RBP9.98□□□□□ -0.81
SMKR1-202ENST00000488846 CEP89Q96ST8 783 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 HSD17B14Q9BPX1 270 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 NOC4LQ9BVI4 516 aaKnown RBP9.98□□□□□ -0.81
SMKR1-202ENST00000488846 ZSCAN16Q9H4T2 348 aaPredicted RBP9.98□□□□□ -0.81
SMKR1-202ENST00000488846 TTC12Q9H892 705 aaPredicted RBP9.98□□□□□ -0.81
SMKR1-202ENST00000488846 COL1A2P08123 1366 aa9.98□□□□□ -0.81
SMKR1-202ENST00000488846 MYH9P35579 1960 aaKnown RBP9.97□□□□□ -0.81
SMKR1-202ENST00000488846 BACH1O14867 736 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 CHMP2AO43633 222 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 CAND2O75155 1236 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 LYPLA2O95372 231 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 INSRRP14616 1297 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 ATP2B1P20020 1258 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 MARK3P27448 753 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 BMP8BP34820 402 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 TXKP42681 527 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 PSMC5P62195 406 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 ZNF200P98182 395 aaPredicted RBP9.97□□□□□ -0.81
SMKR1-202ENST00000488846 PPFIA1Q13136 1202 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 PDIA5Q14554 519 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 TARBP2Q15633 366 aaKnown RBP9.97□□□□□ -0.81
SMKR1-202ENST00000488846 GRIK4Q16099 956 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 FAM47CQ5HY64 1035 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 ARL6IP4Q66PJ3 421 aaKnown RBP9.97□□□□□ -0.81
SMKR1-202ENST00000488846 MFSD5Q6N075 450 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 TRAF7Q6Q0C0 670 aa9.97□□□□□ -0.81
SMKR1-202ENST00000488846 FERMT3Q86UX7 667 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms