RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 SF3A1Q15459 793 aaKnown RBP21.74■■□□□ 1.07
CCM2-216ENST00000488727 KCNA10Q16322 511 aa21.74■■□□□ 1.07
CCM2-216ENST00000488727 SLFN12Q8IYM2 578 aa21.74■■□□□ 1.07
CCM2-216ENST00000488727 UNC45AQ9H3U1 944 aa21.74■■□□□ 1.07
CCM2-216ENST00000488727 CBX8Q9HC52 389 aa21.74■■□□□ 1.07
CCM2-216ENST00000488727 MKI67P46013 3256 aaKnown RBP21.73■■□□□ 1.07
CCM2-216ENST00000488727 GSTTP1A0A1W2PQM5 241 aa21.73■■□□□ 1.07
CCM2-216ENST00000488727 DNM1LO00429 736 aa21.73■■□□□ 1.07
CCM2-216ENST00000488727 NOP56O00567 594 aaKnown RBP21.73■■□□□ 1.07
CCM2-216ENST00000488727 SPTLC2O15270 562 aa21.73■■□□□ 1.07
CCM2-216ENST00000488727 MARCH6O60337 910 aa21.73■■□□□ 1.07
CCM2-216ENST00000488727 KINO60870 393 aaKnown RBP21.73■■□□□ 1.07
CCM2-216ENST00000488727 TXKP42681 527 aa21.73■■□□□ 1.07
CCM2-216ENST00000488727 ATP2C1P98194 919 aaPredicted RBP21.73■■□□□ 1.07
CCM2-216ENST00000488727 SPIRE1Q08AE8 756 aa21.73■■□□□ 1.07
CCM2-216ENST00000488727 FMR1NBQ8N0W7 255 aaPredicted RBP21.73■■□□□ 1.07
CCM2-216ENST00000488727 DNAH12Q6ZR08 3092 aa21.73■■□□□ 1.07
CCM2-216ENST00000488727 CHMP2AO43633 222 aa21.72■■□□□ 1.07
CCM2-216ENST00000488727 ASGR1P07306 291 aa21.72■■□□□ 1.07
CCM2-216ENST00000488727 SOX10P56693 466 aa21.72■■□□□ 1.07
CCM2-216ENST00000488727 KRT76Q01546 638 aa21.72■■□□□ 1.07
CCM2-216ENST00000488727 DIS3LQ8TF46 1054 aaKnown RBP21.72■■□□□ 1.07
CCM2-216ENST00000488727 TTC12Q9H892 705 aaPredicted RBP21.72■■□□□ 1.07
CCM2-216ENST00000488727 AP5Z1O43299 807 aa21.72■■□□□ 1.07
CCM2-216ENST00000488727 TCF7P36402 384 aaPredicted RBP21.72■■□□□ 1.07
CCM2-216ENST00000488727 PURAQ00577 322 aaKnown RBP21.72■■□□□ 1.07
CCM2-216ENST00000488727 PPP2R5CQ13362 524 aa21.72■■□□□ 1.07
CCM2-216ENST00000488727 PTPAQ15257 358 aa21.72■■□□□ 1.07
CCM2-216ENST00000488727 DGKDQ16760 1214 aa21.72■■□□□ 1.07
CCM2-216ENST00000488727 BRDTQ58F21 947 aaPredicted RBP21.72■■□□□ 1.07
CCM2-216ENST00000488727 ZNF746Q6NUN9 644 aaPredicted RBP21.72■■□□□ 1.07
CCM2-216ENST00000488727 PCSK9Q8NBP7 692 aaKnown RBP21.72■■□□□ 1.07
CCM2-216ENST00000488727 SEPT1Q8WYJ6 367 aa21.72■■□□□ 1.07
CCM2-216ENST00000488727 PCDHA12Q9UN75 941 aa21.72■■□□□ 1.07
CCM2-216ENST00000488727 KBTBD13C9JR72 458 aa21.71■■□□□ 1.07
CCM2-216ENST00000488727 PPFIA4O75335 1185 aa21.71■■□□□ 1.07
CCM2-216ENST00000488727 ATG7O95352 703 aa21.71■■□□□ 1.07
CCM2-216ENST00000488727 MYL3P08590 195 aa21.71■■□□□ 1.07
CCM2-216ENST00000488727 ZNF286BP0CG31 522 aa21.71■■□□□ 1.07
CCM2-216ENST00000488727 STX1AQ16623 288 aa21.71■■□□□ 1.07
CCM2-216ENST00000488727 CXCL17Q6UXB2 119 aa21.71■■□□□ 1.07
CCM2-216ENST00000488727 ANKLE1Q8NAG6 615 aa21.71■■□□□ 1.07
CCM2-216ENST00000488727 TSEN34Q9BSV6 310 aaKnown RBP21.71■■□□□ 1.07
CCM2-216ENST00000488727 PHF24Q9UPV7 400 aa21.71■■□□□ 1.07
CCM2-216ENST00000488727 SCN10AQ9Y5Y9 1956 aa21.7■■□□□ 1.06
CCM2-216ENST00000488727 EML1O00423 815 aa21.7■■□□□ 1.06
CCM2-216ENST00000488727 LAD1O00515 517 aa21.7■■□□□ 1.06
CCM2-216ENST00000488727 ACLYP53396 1101 aa21.7■■□□□ 1.06
CCM2-216ENST00000488727 SLC39A14Q15043 492 aa21.7■■□□□ 1.06
CCM2-216ENST00000488727 IL17AQ16552 155 aa21.7■■□□□ 1.06
CCM2-216ENST00000488727 ABHD15Q6UXT9 468 aa21.7■■□□□ 1.06
CCM2-216ENST00000488727 TRIM50Q86XT4 487 aa21.7■■□□□ 1.06
CCM2-216ENST00000488727 PCYT2Q99447 389 aa21.7■■□□□ 1.06
CCM2-216ENST00000488727 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.7■■□□□ 1.06
CCM2-216ENST00000488727 MOXD2PA6NHM9 499 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 ZEB2O60315 1214 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 OFD1O75665 1012 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 LGALS2P05162 132 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 PRPHP41219 470 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 SMAP1Q8IYB5 467 aaPredicted RBP21.69■■□□□ 1.06
CCM2-216ENST00000488727 C16orf70Q9BSU1 422 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 DISC1Q9NRI5 854 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 TCEAL9Q9UHQ7 104 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 POTEMA6NI47 508 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 PPP6R2O75170 966 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 TPM3P06753 285 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 SUPT20HL2P0C7V6 817 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 CAPN2P17655 700 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 TECP42680 631 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 ZNF165P49910 485 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 UTP14CQ5TAP6 766 aaKnown RBP21.69■■□□□ 1.06
CCM2-216ENST00000488727 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.69■■□□□ 1.06
CCM2-216ENST00000488727 LUZP1Q86V48 1076 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 KAT2BQ92831 832 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 FERMT2Q96AC1 680 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 CEP131Q9UPN4 1083 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 SAMM50Q9Y512 469 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 PCDHA10Q9Y5I2 948 aa21.69■■□□□ 1.06
CCM2-216ENST00000488727 MYH9P35579 1960 aaKnown RBP21.68■■□□□ 1.06
CCM2-216ENST00000488727 IGKV6D-21A0A0A0MT36 114 aa21.68■■□□□ 1.06
CCM2-216ENST00000488727 A0A1W2PQ45 241 aaPredicted RBP21.68■■□□□ 1.06
CCM2-216ENST00000488727 A0A1W2PQY0 241 aa21.68■■□□□ 1.06
CCM2-216ENST00000488727 WDR64B1ANS9 1081 aa21.68■■□□□ 1.06
CCM2-216ENST00000488727 BMP15O95972 392 aa21.68■■□□□ 1.06
CCM2-216ENST00000488727 COL6A1P12109 1028 aa21.68■■□□□ 1.06
CCM2-216ENST00000488727 SFNP31947 248 aa21.68■■□□□ 1.06
CCM2-216ENST00000488727 AXDND1Q5T1B0 1012 aaPredicted RBP21.68■■□□□ 1.06
CCM2-216ENST00000488727 NCAPH2Q6IBW4 605 aa21.68■■□□□ 1.06
CCM2-216ENST00000488727 MIER3Q7Z3K6 550 aa21.68■■□□□ 1.06
CCM2-216ENST00000488727 UBE2Q1Q7Z7E8 422 aa21.68■■□□□ 1.06
CCM2-216ENST00000488727 CCDC60Q8IWA6 550 aaPredicted RBP21.68■■□□□ 1.06
CCM2-216ENST00000488727 PAWRQ96IZ0 340 aaKnown RBP21.68■■□□□ 1.06
CCM2-216ENST00000488727 DNAJC25Q9H1X3 360 aa21.68■■□□□ 1.06
CCM2-216ENST00000488727 EMSYQ7Z589 1322 aa21.67■■□□□ 1.06
CCM2-216ENST00000488727 LGR5O75473 907 aa21.67■■□□□ 1.06
CCM2-216ENST00000488727 F2P00734 622 aa21.67■■□□□ 1.06
CCM2-216ENST00000488727 CMA1P23946 247 aa21.67■■□□□ 1.06
CCM2-216ENST00000488727 FXR2P51116 673 aaKnown RBP eCLIP21.67■■□□□ 1.06
CCM2-216ENST00000488727 JAK3P52333 1124 aa21.67■■□□□ 1.06
CCM2-216ENST00000488727 ARL6IP4Q66PJ3 421 aaKnown RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms