RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 MAEAQ7L5Y9 396 aa13.96□□□□□ -0.17
CLIC4-202ENST00000488683 C10orf67Q8IYJ2 551 aa13.96□□□□□ -0.17
CLIC4-202ENST00000488683 IQCDQ96DY2 449 aa13.96□□□□□ -0.17
CLIC4-202ENST00000488683 RUSC1Q9BVN2 902 aa13.96□□□□□ -0.17
CLIC4-202ENST00000488683 BHMT2Q9H2M3 363 aa13.96□□□□□ -0.17
CLIC4-202ENST00000488683 KCTD10Q9H3F6 313 aa13.96□□□□□ -0.17
CLIC4-202ENST00000488683 BMP2KQ9NSY1 1161 aaPredicted RBP13.96□□□□□ -0.17
CLIC4-202ENST00000488683 CALCOCO1Q9P1Z2 691 aa13.96□□□□□ -0.17
CLIC4-202ENST00000488683 A0A1W2PRG0 241 aa13.96□□□□□ -0.18
CLIC4-202ENST00000488683 TMCO5BA8MYB1 307 aa13.96□□□□□ -0.18
CLIC4-202ENST00000488683 F5H6K3 240 aa13.96□□□□□ -0.18
CLIC4-202ENST00000488683 TUBBP07437 444 aa13.96□□□□□ -0.18
CLIC4-202ENST00000488683 GLI1P08151 1106 aa13.96□□□□□ -0.18
CLIC4-202ENST00000488683 CHRNA5P30532 468 aa13.96□□□□□ -0.18
CLIC4-202ENST00000488683 EPS15P42566 896 aa13.96□□□□□ -0.18
CLIC4-202ENST00000488683 KLRC3Q07444 240 aa13.96□□□□□ -0.18
CLIC4-202ENST00000488683 GPS2Q13227 327 aa13.96□□□□□ -0.18
CLIC4-202ENST00000488683 COL23A1Q86Y22 540 aaPredicted RBP13.96□□□□□ -0.18
CLIC4-202ENST00000488683 LRRC27Q9C0I9 530 aa13.96□□□□□ -0.18
CLIC4-202ENST00000488683 TARSL2A2RTX5 802 aaKnown RBP13.95□□□□□ -0.18
CLIC4-202ENST00000488683 GH2P01242 217 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 SPATA31C1P0DKV0 1188 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 ICA1Q05084 483 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 SPIRE1Q08AE8 756 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 KIAA0753Q2KHM9 967 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 SLC27A3Q5K4L6 730 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 HAUS3Q68CZ6 603 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 CCDC174Q6PII3 467 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 KLHL7Q8IXQ5 586 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 SH2D3CQ8N5H7 860 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 RPGRIP1Q96KN7 1286 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 NT5C3AQ9H0P0 336 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 RSPH14Q9UHP6 348 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 PCDHB13Q9Y5F0 798 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 KDM3AQ9Y4C1 1321 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 OPLAHO14841 1288 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 MMP10P09238 476 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 CARSP49589 748 aaKnown RBP13.95□□□□□ -0.18
CLIC4-202ENST00000488683 SLC12A3P55017 1021 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 LRRC31Q6UY01 552 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 TRIM59Q8IWR1 403 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 CRYGNQ8WXF5 182 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 ELMO3Q96BJ8 720 aa13.95□□□□□ -0.18
CLIC4-202ENST00000488683 DHX36Q9H2U1 1008 aaKnown RBP13.95□□□□□ -0.18
CLIC4-202ENST00000488683 CLRN2A0PK11 232 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 PJA2O43164 708 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 LRRN2O75325 713 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 NMT1P30419 496 aaKnown RBP13.94□□□□□ -0.18
CLIC4-202ENST00000488683 ACTN2P35609 894 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 PTK2Q05397 1052 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 KLHL30Q0D2K2 578 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 GIT2Q14161 759 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 RDH13Q8NBN7 331 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 ETNPPLQ8TBG4 499 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 RBM46Q8TBY0 533 aaKnown RBP13.94□□□□□ -0.18
CLIC4-202ENST00000488683 LENG9Q96B70 501 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 NFU1Q9UMS0 254 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 ATAD5Q96QE3 1844 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 AKAP3O75969 853 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 NDUFB10O96000 172 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 AOC3Q16853 763 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 FOXR2Q6PJQ5 311 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 CCDC65Q8IXS2 484 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 FAM71BQ8TC56 605 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 ARL8AQ96BM9 186 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 KRT12Q99456 494 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 PSD3Q9NYI0 1048 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 CEP72Q9P209 647 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 HDAC9Q9UKV0 1011 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 BRWD3Q6RI45 1802 aa13.94□□□□□ -0.18
CLIC4-202ENST00000488683 DDX39AO00148 427 aaKnown RBP13.93□□□□□ -0.18
CLIC4-202ENST00000488683 MSH4O15457 936 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 CFBP00751 764 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 KRT14P02533 472 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 ZNF571Q7Z3V5 609 aaPredicted RBP13.93□□□□□ -0.18
CLIC4-202ENST00000488683 MKL1Q969V6 931 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 CCDC17Q96LX7 622 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 ZDHHC15Q96MV8 337 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 MBOAT7Q96N66 472 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 CHORDC1Q9UHD1 332 aaPredicted RBP13.93□□□□□ -0.18
CLIC4-202ENST00000488683 CYP3A7-CYP3A51PA0A087WV96 503 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 SSU72P8A0A1W2PR75 194 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 FRMD3A2A2Y4 597 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 TCP10L2B9ZVM9 353 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 GCNT3O95395 438 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 NPR1P16066 1061 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 CYP3A7P24462 503 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 USP11P51784 963 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 GUCY2DQ02846 1103 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 SLC9C1Q4G0N8 1177 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 TAF3Q5VWG9 929 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 DDX42Q86XP3 938 aaKnown RBP eCLIP13.93□□□□□ -0.18
CLIC4-202ENST00000488683 ACER1Q8TDN7 264 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 CEP63Q96MT8 703 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 ALS2CR12Q96Q35 445 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 AP1M1Q9BXS5 423 aa13.93□□□□□ -0.18
CLIC4-202ENST00000488683 RBAK-RBAKDNI3L0D1 243 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 DGKZQ13574 1117 aa13.92□□□□□ -0.18
CLIC4-202ENST00000488683 ADAT2Q7Z6V5 191 aaKnown RBP13.92□□□□□ -0.18
CLIC4-202ENST00000488683 TPH2Q8IWU9 490 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms