RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 SLC28A3Q9HAS3 691 aa20.17■□□□□ 0.82
ITGB1-215ENST00000488494 TUBE1Q9UJT0 475 aa20.17■□□□□ 0.82
ITGB1-215ENST00000488494 TRPC6Q9Y210 931 aa20.17■□□□□ 0.82
ITGB1-215ENST00000488494 PTPRSQ13332 1948 aa20.17■□□□□ 0.82
ITGB1-215ENST00000488494 UNC80Q8N2C7 3258 aa20.16■□□□□ 0.82
ITGB1-215ENST00000488494 PFKFB2O60825 505 aa20.16■□□□□ 0.82
ITGB1-215ENST00000488494 SEC24BO95487 1268 aa20.16■□□□□ 0.82
ITGB1-215ENST00000488494 IGBP1P78318 339 aa20.16■□□□□ 0.82
ITGB1-215ENST00000488494 ANKRD1Q15327 319 aa20.16■□□□□ 0.82
ITGB1-215ENST00000488494 MAFAQ8NHW3 353 aaPredicted RBP20.16■□□□□ 0.82
ITGB1-215ENST00000488494 PCDHA4Q9UN74 947 aa20.16■□□□□ 0.82
ITGB1-215ENST00000488494 TRANK1O15050 2925 aa20.15■□□□□ 0.82
ITGB1-215ENST00000488494 PRUNE2Q8WUY3 3088 aa20.15■□□□□ 0.82
ITGB1-215ENST00000488494 DTNBO60941 627 aa20.15■□□□□ 0.82
ITGB1-215ENST00000488494 CA3P07451 260 aa20.15■□□□□ 0.82
ITGB1-215ENST00000488494 DEFB103AP81534 67 aa20.15■□□□□ 0.82
ITGB1-215ENST00000488494 TAF2Q6P1X5 1199 aa20.15■□□□□ 0.82
ITGB1-215ENST00000488494 TMCO2Q7Z6W1 182 aaPredicted RBP20.15■□□□□ 0.82
ITGB1-215ENST00000488494 PHOSPHO2Q8TCD6 241 aa20.15■□□□□ 0.82
ITGB1-215ENST00000488494 LENG9Q96B70 501 aa20.15■□□□□ 0.82
ITGB1-215ENST00000488494 ZBTB10Q96DT7 871 aa20.15■□□□□ 0.82
ITGB1-215ENST00000488494 PRDM12Q9H4Q4 367 aa20.15■□□□□ 0.82
ITGB1-215ENST00000488494 STK36Q9NRP7 1315 aa20.15■□□□□ 0.82
ITGB1-215ENST00000488494 SIP14410 1827 aa20.15■□□□□ 0.82
ITGB1-215ENST00000488494 ABHD14A-ACY1A0A1B0GW23 586 aa20.14■□□□□ 0.81
ITGB1-215ENST00000488494 MBLAC1A4D2B0 266 aaPredicted RBP20.14■□□□□ 0.81
ITGB1-215ENST00000488494 BACH1O14867 736 aa20.14■□□□□ 0.81
ITGB1-215ENST00000488494 DHX15O43143 795 aaKnown RBP20.14■□□□□ 0.81
ITGB1-215ENST00000488494 CIITAP33076 1130 aa20.14■□□□□ 0.81
ITGB1-215ENST00000488494 STAT5BP51692 787 aa20.14■□□□□ 0.81
ITGB1-215ENST00000488494 IKBKEQ14164 716 aa20.14■□□□□ 0.81
ITGB1-215ENST00000488494 PLCB4Q15147 1175 aa20.14■□□□□ 0.81
ITGB1-215ENST00000488494 NPY5RQ15761 445 aa20.14■□□□□ 0.81
ITGB1-215ENST00000488494 MARCH8Q5T0T0 291 aa20.14■□□□□ 0.81
ITGB1-215ENST00000488494 PLPPR4Q7Z2D5 763 aa20.14■□□□□ 0.81
ITGB1-215ENST00000488494 BLIDQ8IZY5 108 aa20.14■□□□□ 0.81
ITGB1-215ENST00000488494 DAGLBQ8NCG7 672 aa20.14■□□□□ 0.81
ITGB1-215ENST00000488494 TCEAL9Q9UHQ7 104 aa20.14■□□□□ 0.81
ITGB1-215ENST00000488494 EFCAB14O75071 495 aa20.13■□□□□ 0.81
ITGB1-215ENST00000488494 ATG7O95352 703 aa20.13■□□□□ 0.81
ITGB1-215ENST00000488494 LARGE1O95461 756 aa20.13■□□□□ 0.81
ITGB1-215ENST00000488494 INSRRP14616 1297 aa20.13■□□□□ 0.81
ITGB1-215ENST00000488494 PLEKHG4Q58EX7 1191 aa20.13■□□□□ 0.81
ITGB1-215ENST00000488494 FAM160B1Q5W0V3 765 aa20.13■□□□□ 0.81
ITGB1-215ENST00000488494 ABHD15Q6UXT9 468 aa20.13■□□□□ 0.81
ITGB1-215ENST00000488494 CCDC60Q8IWA6 550 aaPredicted RBP20.13■□□□□ 0.81
ITGB1-215ENST00000488494 FAM177A1Q8N128 213 aaPredicted RBP20.13■□□□□ 0.81
ITGB1-215ENST00000488494 SLC17A8Q8NDX2 589 aa20.13■□□□□ 0.81
ITGB1-215ENST00000488494 DBF4BQ8NFT6 615 aa20.13■□□□□ 0.81
ITGB1-215ENST00000488494 TBCKQ8TEA7 893 aa20.13■□□□□ 0.81
ITGB1-215ENST00000488494 TRAPPC12Q8WVT3 735 aa20.13■□□□□ 0.81
ITGB1-215ENST00000488494 OSBPL7Q9BZF2 842 aa20.13■□□□□ 0.81
ITGB1-215ENST00000488494 KCNJ14Q9UNX9 436 aa20.13■□□□□ 0.81
ITGB1-215ENST00000488494 A0A0C4DFX4 3053 aa20.13■□□□□ 0.81
ITGB1-215ENST00000488494 IGKV6D-21A0A0A0MT36 114 aa20.12■□□□□ 0.81
ITGB1-215ENST00000488494 POTEB3A0JP26 581 aa20.12■□□□□ 0.81
ITGB1-215ENST00000488494 M0R2N6 131 aa20.12■□□□□ 0.81
ITGB1-215ENST00000488494 EDIL3O43854 480 aa20.12■□□□□ 0.81
ITGB1-215ENST00000488494 CTDNEP1O95476 244 aa20.12■□□□□ 0.81
ITGB1-215ENST00000488494 NEK4P51957 841 aa20.12■□□□□ 0.81
ITGB1-215ENST00000488494 GALNT17Q6IS24 598 aa20.12■□□□□ 0.81
ITGB1-215ENST00000488494 ZNF746Q6NUN9 644 aaPredicted RBP20.12■□□□□ 0.81
ITGB1-215ENST00000488494 MIS18BP1Q6P0N0 1132 aa20.12■□□□□ 0.81
ITGB1-215ENST00000488494 POTEBQ6S5H4 581 aa20.12■□□□□ 0.81
ITGB1-215ENST00000488494 RSPH3Q86UC2 560 aa20.12■□□□□ 0.81
ITGB1-215ENST00000488494 NECAB1Q8N987 351 aa20.12■□□□□ 0.81
ITGB1-215ENST00000488494 GAS2L1Q99501 681 aaPredicted RBP20.12■□□□□ 0.81
ITGB1-215ENST00000488494 C22orf23Q9BZE7 217 aa20.12■□□□□ 0.81
ITGB1-215ENST00000488494 FAM49AQ9H0Q0 323 aaPredicted RBP20.12■□□□□ 0.81
ITGB1-215ENST00000488494 TBC1D22BQ9NU19 505 aa20.12■□□□□ 0.81
ITGB1-215ENST00000488494 MICAL3Q7RTP6 2002 aa20.11■□□□□ 0.81
ITGB1-215ENST00000488494 RRN3P2A6NIE6 340 aa20.11■□□□□ 0.81
ITGB1-215ENST00000488494 TLL1O43897 1013 aa20.11■□□□□ 0.81
ITGB1-215ENST00000488494 ARHGEF15O94989 841 aa20.11■□□□□ 0.81
ITGB1-215ENST00000488494 CHRNA1P02708 482 aa20.11■□□□□ 0.81
ITGB1-215ENST00000488494 SLC26A2P50443 739 aa20.11■□□□□ 0.81
ITGB1-215ENST00000488494 KRT76Q01546 638 aa20.11■□□□□ 0.81
ITGB1-215ENST00000488494 MKRN4PQ13434 485 aaPredicted RBP20.11■□□□□ 0.81
ITGB1-215ENST00000488494 ME3Q16798 604 aa20.11■□□□□ 0.81
ITGB1-215ENST00000488494 FAM26DQ5JW98 314 aa20.11■□□□□ 0.81
ITGB1-215ENST00000488494 PDXDC2PQ6P474 469 aa20.11■□□□□ 0.81
ITGB1-215ENST00000488494 RPAINQ86UA6 219 aa20.11■□□□□ 0.81
ITGB1-215ENST00000488494 DNAJB3Q8WWF6 145 aa20.11■□□□□ 0.81
ITGB1-215ENST00000488494 SEPT8Q92599 483 aa20.11■□□□□ 0.81
ITGB1-215ENST00000488494 GTF3C6Q969F1 213 aa20.11■□□□□ 0.81
ITGB1-215ENST00000488494 PHF20Q9BVI0 1012 aa20.11■□□□□ 0.81
ITGB1-215ENST00000488494 ZNF302Q9NR11 478 aa20.11■□□□□ 0.81
ITGB1-215ENST00000488494 KIF28PB7ZC32 967 aa20.1■□□□□ 0.81
ITGB1-215ENST00000488494 MSH4O15457 936 aa20.1■□□□□ 0.81
ITGB1-215ENST00000488494 TDP2O95551 362 aa20.1■□□□□ 0.81
ITGB1-215ENST00000488494 USP11P51784 963 aa20.1■□□□□ 0.81
ITGB1-215ENST00000488494 MGAT3Q09327 533 aa20.1■□□□□ 0.81
ITGB1-215ENST00000488494 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.1■□□□□ 0.81
ITGB1-215ENST00000488494 SMAP1Q8IYB5 467 aaPredicted RBP20.1■□□□□ 0.81
ITGB1-215ENST00000488494 ATP8B4Q8TF62 1192 aa20.1■□□□□ 0.81
ITGB1-215ENST00000488494 TNPO1Q92973 898 aaKnown RBP20.1■□□□□ 0.81
ITGB1-215ENST00000488494 ZBED2Q9BTP6 218 aa20.1■□□□□ 0.81
ITGB1-215ENST00000488494 GJB4Q9NTQ9 266 aa20.1■□□□□ 0.81
ITGB1-215ENST00000488494 ORC3Q9UBD5 711 aaPredicted RBP20.1■□□□□ 0.81
ITGB1-215ENST00000488494 KAT6AQ92794 2004 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms