RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 NRCAMQ92823 1304 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 PLXNA4Q9HCM2 1894 aa10.76□□□□□ -0.69
COL17A1-207ENST00000488320 DCHS1Q96JQ0 3298 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 TRIM6-TRIM34B2RNG4 842 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 CCER2I3L3R5 266 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 KRT37O76014 449 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 BRD1O95696 1058 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 HSD17B4P51659 736 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 ADAM17P78536 824 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 SP4Q02446 784 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 UBE3AQ05086 875 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 MGAT3Q09327 533 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 DUSP6Q16828 381 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 GNPTABQ3T906 1256 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 ASPRV1Q53RT3 343 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 FBXO47Q5MNV8 452 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 ANKRD54Q6NXT1 300 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 RUFY4Q6ZNE9 571 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 FCHSD1Q86WN1 690 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 DGKHQ86XP1 1220 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 TRIM50Q86XT4 487 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 FLCNQ8NFG4 579 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 VN1R2Q8NFZ6 395 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 IL31RAQ8NI17 732 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 DNAJB3Q8WWF6 145 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 GPR20Q99678 358 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 S1PR5Q9H228 398 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 JMJD4Q9H9V9 463 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 TMEM260Q9NX78 707 aa10.75□□□□□ -0.69
COL17A1-207ENST00000488320 PARP1P09874 1014 aaKnown RBP10.74□□□□□ -0.69
COL17A1-207ENST00000488320 GATMP50440 423 aa10.74□□□□□ -0.69
COL17A1-207ENST00000488320 CLCN5P51795 746 aa10.74□□□□□ -0.69
COL17A1-207ENST00000488320 ERVFC1P60507 584 aa10.74□□□□□ -0.69
COL17A1-207ENST00000488320 CCDC178Q5BJE1 867 aa10.74□□□□□ -0.69
COL17A1-207ENST00000488320 PLPP4Q5VZY2 271 aa10.74□□□□□ -0.69
COL17A1-207ENST00000488320 PDE12Q6L8Q7 609 aaKnown RBP10.74□□□□□ -0.69
COL17A1-207ENST00000488320 CES5AQ6NT32 575 aa10.74□□□□□ -0.69
COL17A1-207ENST00000488320 METTL7BQ6UX53 244 aa10.74□□□□□ -0.69
COL17A1-207ENST00000488320 RTN4RL1Q86UN2 441 aaPredicted RBP10.74□□□□□ -0.69
COL17A1-207ENST00000488320 IQCA1Q86XH1 822 aa10.74□□□□□ -0.69
COL17A1-207ENST00000488320 THNSL1Q8IYQ7 743 aa10.74□□□□□ -0.69
COL17A1-207ENST00000488320 ESR2Q92731 530 aa10.74□□□□□ -0.69
COL17A1-207ENST00000488320 RMDN1Q96DB5 314 aa10.74□□□□□ -0.69
COL17A1-207ENST00000488320 HINFPQ9BQA5 517 aa10.74□□□□□ -0.69
COL17A1-207ENST00000488320 RNF41Q9H4P4 317 aaPredicted RBP10.74□□□□□ -0.69
COL17A1-207ENST00000488320 AGO3Q9H9G7 860 aaKnown RBP10.74□□□□□ -0.69
COL17A1-207ENST00000488320 RTEL1Q9NZ71 1219 aa10.74□□□□□ -0.69
COL17A1-207ENST00000488320 PUF60Q9UHX1 559 aaKnown RBP10.74□□□□□ -0.69
COL17A1-207ENST00000488320 PCDHB7Q9Y5E2 793 aa10.74□□□□□ -0.69
COL17A1-207ENST00000488320 PCDHA1Q9Y5I3 950 aa10.74□□□□□ -0.69
COL17A1-207ENST00000488320 DOCK5Q9H7D0 1870 aa10.74□□□□□ -0.69
COL17A1-207ENST00000488320 C2CD4DB7Z1M9 353 aa10.73□□□□□ -0.69
COL17A1-207ENST00000488320 GCOM1H8Y6P7 765 aaPredicted RBP10.73□□□□□ -0.69
COL17A1-207ENST00000488320 M0QZ92 97 aa10.73□□□□□ -0.69
COL17A1-207ENST00000488320 FGF18O76093 207 aa10.73□□□□□ -0.69
COL17A1-207ENST00000488320 POLR2MP0CAP2 368 aa10.73□□□□□ -0.69
COL17A1-207ENST00000488320 PCP11498 1178 aaKnown RBP10.73□□□□□ -0.69
COL17A1-207ENST00000488320 SCG2P13521 617 aa10.73□□□□□ -0.69
COL17A1-207ENST00000488320 HOXB8P17481 243 aaPredicted RBP10.73□□□□□ -0.69
COL17A1-207ENST00000488320 MRPS6P82932 125 aaKnown RBP10.73□□□□□ -0.69
COL17A1-207ENST00000488320 HNRNPUQ00839 825 aaKnown RBP eCLIP10.73□□□□□ -0.69
COL17A1-207ENST00000488320 PPFIA1Q13136 1202 aa10.73□□□□□ -0.69
COL17A1-207ENST00000488320 TPRNQ4KMQ1 711 aa10.73□□□□□ -0.69
COL17A1-207ENST00000488320 IER5Q5VY09 327 aa10.73□□□□□ -0.69
COL17A1-207ENST00000488320 SYCE2Q6PIF2 218 aa10.73□□□□□ -0.69
COL17A1-207ENST00000488320 TMEM184AQ6ZMB5 413 aa10.73□□□□□ -0.69
COL17A1-207ENST00000488320 KIAA2013Q8IYS2 634 aa10.73□□□□□ -0.69
COL17A1-207ENST00000488320 SAMD3Q8N6K7 520 aa10.73□□□□□ -0.69
COL17A1-207ENST00000488320 PI4K2BQ8TCG2 481 aa10.73□□□□□ -0.69
COL17A1-207ENST00000488320 LINC01599Q8WXQ3 324 aa10.73□□□□□ -0.69
COL17A1-207ENST00000488320 FAM49AQ9H0Q0 323 aaPredicted RBP10.73□□□□□ -0.69
COL17A1-207ENST00000488320 SMOC2Q9H3U7 446 aa10.73□□□□□ -0.69
COL17A1-207ENST00000488320 DCTPP1Q9H773 170 aa10.73□□□□□ -0.69
COL17A1-207ENST00000488320 ENTPD7Q9NQZ7 604 aa10.73□□□□□ -0.69
COL17A1-207ENST00000488320 HELLSQ9NRZ9 838 aa10.73□□□□□ -0.69
COL17A1-207ENST00000488320 TBKBP1A7MCY6 615 aa10.72□□□□□ -0.69
COL17A1-207ENST00000488320 SPATA31C2B4DYI2 1134 aa10.72□□□□□ -0.69
COL17A1-207ENST00000488320 OPLAHO14841 1288 aa10.72□□□□□ -0.69
COL17A1-207ENST00000488320 LMNAP02545 664 aaKnown RBP10.72□□□□□ -0.69
COL17A1-207ENST00000488320 ASGR2P07307 311 aa10.72□□□□□ -0.69
COL17A1-207ENST00000488320 MARK3P27448 753 aa10.72□□□□□ -0.69
COL17A1-207ENST00000488320 IGBP1P78318 339 aa10.72□□□□□ -0.69
COL17A1-207ENST00000488320 APOBRQ0VD83 1088 aa10.72□□□□□ -0.69
COL17A1-207ENST00000488320 PAK2Q13177 524 aa10.72□□□□□ -0.69
COL17A1-207ENST00000488320 PUM1Q14671 1186 aaKnown RBP eCLIP10.72□□□□□ -0.69
COL17A1-207ENST00000488320 ANGPT1Q15389 498 aa10.72□□□□□ -0.69
COL17A1-207ENST00000488320 GRIK4Q16099 956 aa10.72□□□□□ -0.69
COL17A1-207ENST00000488320 MCMDC2Q4G0Z9 681 aa10.72□□□□□ -0.69
COL17A1-207ENST00000488320 CNTNAP3BQ96NU0 1288 aa10.72□□□□□ -0.69
COL17A1-207ENST00000488320 NECTIN4Q96NY8 510 aa10.72□□□□□ -0.69
COL17A1-207ENST00000488320 CNTNAP3Q9BZ76 1288 aa10.72□□□□□ -0.69
COL17A1-207ENST00000488320 LIMD1Q9UGP4 676 aa10.72□□□□□ -0.69
COL17A1-207ENST00000488320 TUBE1Q9UJT0 475 aa10.72□□□□□ -0.69
COL17A1-207ENST00000488320 PADI3Q9ULW8 664 aa10.72□□□□□ -0.69
COL17A1-207ENST00000488320 LOXHD1Q8IVV2 1947 aa10.72□□□□□ -0.69
COL17A1-207ENST00000488320 STK25O00506 426 aa10.71□□□□□ -0.69
COL17A1-207ENST00000488320 ZNF213O14771 459 aa10.71□□□□□ -0.69
COL17A1-207ENST00000488320 FIBPO43427 364 aa10.71□□□□□ -0.69
COL17A1-207ENST00000488320 STAM2O75886 525 aa10.71□□□□□ -0.69
COL17A1-207ENST00000488320 RPLP2P05387 115 aaKnown RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms