RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 ZGPATQ8N5A5 531 aaKnown RBP7.77□□□□□ -1.17
TNFSF4-203ENST00000488053 IDI2Q9BXS1 227 aa7.77□□□□□ -1.17
TNFSF4-203ENST00000488053 DISC1Q9NRI5 854 aa7.77□□□□□ -1.17
TNFSF4-203ENST00000488053 STOML1Q9UBI4 398 aa7.77□□□□□ -1.17
TNFSF4-203ENST00000488053 GABRQQ9UN88 632 aa7.77□□□□□ -1.17
TNFSF4-203ENST00000488053 MYO5AQ9Y4I1 1855 aaKnown RBP7.77□□□□□ -1.17
TNFSF4-203ENST00000488053 MROH7-TTC4A0A0A0MT08 1334 aa7.77□□□□□ -1.17
TNFSF4-203ENST00000488053 CXCL11O14625 94 aa7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 CT47B1P0C2W7 299 aaPredicted RBP7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 RAB6AP20340 208 aa7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 FXR1P51114 621 aaKnown RBP eCLIP7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 PRMT2P55345 433 aa7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 MVPQ14764 893 aaKnown RBP7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 WIPI1Q5MNZ9 446 aaPredicted RBP7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 GORABQ5T7V8 394 aa7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 SPTY2D1Q68D10 685 aaPredicted RBP7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 CDPF1Q6NVV7 123 aa7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 RNF214Q8ND24 703 aa7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 SMCR8Q8TEV9 937 aaPredicted RBP7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 ZNF384Q8TF68 577 aa7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 FBLIM1Q8WUP2 373 aa7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 DPF3Q92784 378 aa7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 FRAT1Q92837 279 aaPredicted RBP7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 FAM83CQ9BQN1 747 aa7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 ACSS3Q9H6R3 686 aa7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 RAI14Q9P0K7 980 aa7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 HMG20BQ9P0W2 317 aa7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 HDAC5Q9UQL6 1122 aa7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 AFG3L2Q9Y4W6 797 aa7.76□□□□□ -1.17
TNFSF4-203ENST00000488053 PNMA6EA0A0J9YXQ4 647 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 FAM95CA0A1B0GW59 222 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 DCDC2CA8MYV0 355 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 TNPO2O14787 897 aaKnown RBP7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 DYRK3O43781 588 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 BCAR3O75815 825 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 BPNT1O95861 308 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 GNAI3P08754 354 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 TRIM27P14373 513 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 EIF4A3P38919 411 aaKnown RBP7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 FLT3LGP49771 235 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 RHBDL3P58872 404 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 RPL6Q02878 288 aaKnown RBP7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 MAP7Q14244 749 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 TTLL4Q14679 1199 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 TREML2Q5T2D2 321 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 LRFN4Q6PJG9 635 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 PAOXQ6QHF9 649 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 FASTKD5Q7L8L6 764 aaKnown RBP7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 SPATA5Q8NB90 893 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 GATAD2BQ8WXI9 593 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 EZH1Q92800 747 aaPredicted RBP7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 PLPPR2Q96GM1 343 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 SUPT16HQ9Y5B9 1047 aaKnown RBP7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 TACC3Q9Y6A5 838 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 CEP290O15078 2479 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 CDK5RAP2Q96SN8 1893 aa7.75□□□□□ -1.17
TNFSF4-203ENST00000488053 TRIOBPQ9H2D6 2365 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 SIPA1L1O43166 1804 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 GPR75-ASB3A0A0A6YYF3 556 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 FANCGO15287 622 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 GSC2O15499 205 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 ADCY3O60266 1144 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 CTNND1O60716 968 aaKnown RBP7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 GNAI2P04899 355 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 FURINP09958 794 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 TCF3P15923 654 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 MCAMP43121 646 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 UBXN2AP68543 259 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 FAM160A1Q05DH4 1040 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 RING1Q06587 406 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 SPP2Q13103 211 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 G3BP1Q13283 466 aaKnown RBP eCLIP7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 INPP5AQ14642 412 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 RRP1BQ14684 758 aaKnown RBP7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 BNC2Q6ZN30 1099 aaPredicted RBP7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 CYFIP1Q7L576 1253 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 METTL16Q86W50 562 aaKnown RBP7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 C12orf40Q86WS4 652 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 SMYD4Q8IYR2 804 aaPredicted RBP7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 ANKRD13CQ8N6S4 541 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 GOLM1Q8NBJ4 401 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 SH3RF3Q8TEJ3 882 aaPredicted RBP7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 U2AF1L4Q8WU68 220 aaKnown RBP7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 NSUN4Q96CB9 384 aaKnown RBP7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 SEMA6CQ9H3T2 930 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 C7orf69Q9H7B7 122 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 LRP2BPQ9P2M1 347 aa7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 PDS5AQ29RF7 1337 aaKnown RBP7.74□□□□□ -1.17
TNFSF4-203ENST00000488053 FAM221AA4D161 298 aa7.73□□□□□ -1.17
TNFSF4-203ENST00000488053 RNGTTO60942 597 aaKnown RBP7.73□□□□□ -1.17
TNFSF4-203ENST00000488053 CILPO75339 1184 aa7.73□□□□□ -1.17
TNFSF4-203ENST00000488053 FARP2O94887 1054 aaPredicted RBP7.73□□□□□ -1.17
TNFSF4-203ENST00000488053 F13A1P00488 732 aa7.73□□□□□ -1.17
TNFSF4-203ENST00000488053 LDHCP07864 332 aa7.73□□□□□ -1.17
TNFSF4-203ENST00000488053 GJB1P08034 283 aa7.73□□□□□ -1.17
TNFSF4-203ENST00000488053 NFICP08651 508 aa7.73□□□□□ -1.17
TNFSF4-203ENST00000488053 GJA8P48165 433 aa7.73□□□□□ -1.17
TNFSF4-203ENST00000488053 HMGCS2P54868 508 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms