RNA–Protein interactions for RNA: ENST00000487332.1

RNF220-215, Transcript of ring finger protein 220, human

TSL 3

Gene RNF220, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF220-215	ENST00000487332	DOCK5	Q9H7D0	1870 aa		11.65	□□□□□ -0.54
RNF220-215	ENST00000487332	NBN	O60934	754 aa		11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	PPFIA3	O75145	1194 aa		11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	FDPS	P14324	419 aa	Known RBP	11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	GCFC2	P16383	781 aa	Known RBP	11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	SFN	P31947	248 aa		11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	STAT5B	P51692	787 aa		11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	ZNF200	P98182	395 aa	Predicted RBP	11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	ST3GAL1	Q11201	340 aa		11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	MKRN4P	Q13434	485 aa	Predicted RBP	11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	GRIK4	Q16099	956 aa		11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	PRR16	Q569H4	304 aa		11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	ZNF618	Q5T7W0	954 aa		11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	FAM160B1	Q5W0V3	765 aa		11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	PPP4R3A	Q6IN85	833 aa		11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	MIS18BP1	Q6P0N0	1132 aa		11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	SLC5A5	Q92911	643 aa		11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	ZSCAN31	Q96LW9	406 aa	Predicted RBP	11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	AIFM3	Q96NN9	605 aa		11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	LLPH	Q9BRT6	129 aa	Known RBP	11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	BRMS1	Q9HCU9	246 aa		11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	SH2B1	Q9NRF2	756 aa	Predicted RBP	11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	CXXC1	Q9P0U4	656 aa	Predicted RBP	11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	TUBE1	Q9UJT0	475 aa		11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	LIMCH1	Q9UPQ0	1083 aa		11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	SLC4A7	Q9Y6M7	1214 aa		11.64	□□□□□ -0.55
RNF220-215	ENST00000487332	CCDC194	A0A1B0GVG4	234 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	ABHD14A-ACY1	A0A1B0GW23	586 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	WDR64	B1ANS9	1081 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	RSPH10B2	B2RC85	870 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	MSH4	O15457	936 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	HBP1	O60381	514 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	RSPH10B	P0C881	870 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	JAK3	P52333	1124 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	MGAT3	Q09327	533 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	PLCB4	Q15147	1175 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	RABEP1	Q15276	862 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	B3GNT9	Q6UX72	402 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	OTOP2	Q7RTS6	562 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	DEFB128	Q7Z7B8	93 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	NEK8	Q86SG6	692 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	RSPH3	Q86UC2	560 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	CCDC60	Q8IWA6	550 aa	Predicted RBP	11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	ETNPPL	Q8TBG4	499 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	ATP8B4	Q8TF62	1192 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	APBB2	Q92870	758 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	PBX4	Q9BYU1	374 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	UPF2	Q9HAU5	1272 aa	Known RBP	11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	SETD4	Q9NVD3	440 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	STXBP5L	Q9Y2K9	1186 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	PCDHA11	Q9Y5I1	949 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	MAFB	Q9Y5Q3	323 aa	Predicted RBP	11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	SQOR	Q9Y6N5	450 aa		11.63	□□□□□ -0.55
RNF220-215	ENST00000487332	POTEB3	A0JP26	581 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	TBX3	O15119	743 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	PSMD10	O75832	226 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	MMP1	P03956	469 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	PSAP	P07602	524 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	INSRR	P14616	1297 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	ATP2A2	P16615	1042 aa	Known RBP	11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	MARK3	P27448	753 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	KRT2	P35908	639 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	THPO	P40225	353 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	HMGN5	P82970	282 aa	Known RBP	11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	MBTPS1	Q14703	1052 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	PLEKHG4	Q58EX7	1191 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	MARCH8	Q5T0T0	291 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	POTEB	Q6S5H4	581 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	NECAB1	Q8N987	351 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	BBX	Q8WY36	941 aa	Predicted RBP	11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	TNFRSF25	Q93038	417 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	TIFA	Q96CG3	184 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	FAM167A	Q96KS9	214 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	TEKT3	Q9BXF9	490 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	FTO	Q9C0B1	505 aa	Known RBP eCLIP	11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	TTYH1	Q9H313	450 aa	Predicted RBP	11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	KCNMB3	Q9NPA1	279 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	ZNF302	Q9NR11	478 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	KCNJ14	Q9UNX9	436 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	CEP131	Q9UPN4	1083 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	PCDHA2	Q9Y5H9	948 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	PCDHA10	Q9Y5I2	948 aa		11.62	□□□□□ -0.55
RNF220-215	ENST00000487332	KDM3A	Q9Y4C1	1321 aa		11.61	□□□□□ -0.55
RNF220-215	ENST00000487332	CEP290	O15078	2479 aa		11.61	□□□□□ -0.55
RNF220-215	ENST00000487332	SMIM35	A0A1B0GVV1	85 aa		11.61	□□□□□ -0.55
RNF220-215	ENST00000487332	ZBBX	A8MT70	800 aa		11.61	□□□□□ -0.55
RNF220-215	ENST00000487332	DDX39A	O00148	427 aa	Known RBP	11.61	□□□□□ -0.55
RNF220-215	ENST00000487332	GAS7	O60861	476 aa		11.61	□□□□□ -0.55
RNF220-215	ENST00000487332	TDP2	O95551	362 aa		11.61	□□□□□ -0.55
RNF220-215	ENST00000487332	WDR5	P61964	334 aa	Known RBP	11.61	□□□□□ -0.55
RNF220-215	ENST00000487332	ZNF484	Q5JVG2	852 aa		11.61	□□□□□ -0.55
RNF220-215	ENST00000487332	LRCH2	Q5VUJ6	765 aa		11.61	□□□□□ -0.55
RNF220-215	ENST00000487332	PDXDC2P	Q6P474	469 aa		11.61	□□□□□ -0.55
RNF220-215	ENST00000487332		Q7L0L9	218 aa		11.61	□□□□□ -0.55
RNF220-215	ENST00000487332	FAM20A	Q96MK3	541 aa		11.61	□□□□□ -0.55
RNF220-215	ENST00000487332	GUCD1	Q96NT3	240 aa		11.61	□□□□□ -0.55
RNF220-215	ENST00000487332	SEMA6B	Q9H3T3	888 aa		11.61	□□□□□ -0.55
RNF220-215	ENST00000487332	DDX25	Q9UHL0	483 aa	Known RBP	11.61	□□□□□ -0.55
RNF220-215	ENST00000487332	MSRA	Q9UJ68	235 aa		11.61	□□□□□ -0.55
RNF220-215	ENST00000487332	TRPC6	Q9Y210	931 aa		11.61	□□□□□ -0.55

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