RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 SPATA33Q96N06 139 aa8.19□□□□□ -1.1
UBE4B-209ENST00000487244 UIMC1Q96RL1 719 aa8.19□□□□□ -1.1
UBE4B-209ENST00000487244 CTAGE1Q96RT6 745 aa8.19□□□□□ -1.1
UBE4B-209ENST00000487244 SPSB2Q99619 263 aa8.19□□□□□ -1.1
UBE4B-209ENST00000487244 LBHD1Q9BQE6 289 aaPredicted RBP8.19□□□□□ -1.1
UBE4B-209ENST00000487244 PPP1R12CQ9BZL4 782 aa8.19□□□□□ -1.1
UBE4B-209ENST00000487244 ZMYND12Q9H0C1 365 aa8.19□□□□□ -1.1
UBE4B-209ENST00000487244 GJB4Q9NTQ9 266 aa8.19□□□□□ -1.1
UBE4B-209ENST00000487244 SLC27A5Q9Y2P5 690 aa8.19□□□□□ -1.1
UBE4B-209ENST00000487244 UBIAD1Q9Y5Z9 338 aa8.19□□□□□ -1.1
UBE4B-209ENST00000487244 MROH7Q68CQ1 1323 aa8.19□□□□□ -1.1
UBE4B-209ENST00000487244 GBF1Q92538 1859 aa8.19□□□□□ -1.1
UBE4B-209ENST00000487244 CPLX1O14810 134 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 KPNA6O60684 536 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 PFKFB2O60825 505 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 STAM2O75886 525 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 F2P00734 622 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 TIMP1P01033 207 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 LGALS2P05162 132 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 TGFB3P10600 412 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 SREBF1P36956 1147 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 ARHGAP4P98171 946 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 AKAP17AQ02040 695 aaKnown RBP8.18□□□□□ -1.1
UBE4B-209ENST00000487244 SSRP1Q08945 709 aaKnown RBP8.18□□□□□ -1.1
UBE4B-209ENST00000487244 MTMR1Q13613 665 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 SHHQ15465 462 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 NPY5RQ15761 445 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 ME3Q16798 604 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 GNPTABQ3T906 1256 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 FAM47CQ5HY64 1035 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 GDF6Q6KF10 455 aaPredicted RBP8.18□□□□□ -1.1
UBE4B-209ENST00000487244 XRRA1Q6P2D8 792 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 KCNV1Q6PIU1 500 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 METTL7BQ6UX53 244 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 PARP9Q8IXQ6 854 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 TDHQ8IZJ6 230 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 REXO1Q8N1G1 1221 aaKnown RBP8.18□□□□□ -1.1
UBE4B-209ENST00000487244 CRYGNQ8WXF5 182 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 GPRASP2Q96D09 838 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 GPR20Q99678 358 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 C16orf70Q9BSU1 422 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 ALG1Q9BT22 464 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 NOC4LQ9BVI4 516 aaKnown RBP8.18□□□□□ -1.1
UBE4B-209ENST00000487244 WNT8AQ9H1J5 351 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 SLKQ9H2G2 1235 aaPredicted RBP8.18□□□□□ -1.1
UBE4B-209ENST00000487244 MLXIPQ9HAP2 919 aa8.18□□□□□ -1.1
UBE4B-209ENST00000487244 SIP14410 1827 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 CHD9Q3L8U1 2897 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 MYH9P35579 1960 aaKnown RBP8.17□□□□□ -1.1
UBE4B-209ENST00000487244 FAM86B1E9PN63 330 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 HAS3O00219 553 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 TLR3O15455 904 aaKnown RBP8.17□□□□□ -1.1
UBE4B-209ENST00000487244 EDIL3O43854 480 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 JAK2O60674 1132 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 FOSP01100 380 aaPredicted RBP8.17□□□□□ -1.1
UBE4B-209ENST00000487244 FAM86B2P0C5J1 330 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 ARP10275 920 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 CSF2RAP15509 400 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 CCL23P55773 120 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 ZNF200P98182 395 aaPredicted RBP8.17□□□□□ -1.1
UBE4B-209ENST00000487244 FPGSQ05932 587 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 ITGB3BPQ13352 177 aaPredicted RBP8.17□□□□□ -1.1
UBE4B-209ENST00000487244 AP3B2Q13367 1082 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 KIAA0753Q2KHM9 967 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 NFRKBQ6P4R8 1299 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 C16orf59Q7L2K0 433 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 NLRX1Q86UT6 975 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 TRIM22Q8IYM9 498 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 DHX38Q92620 1227 aaKnown RBP8.17□□□□□ -1.1
UBE4B-209ENST00000487244 WNT8BQ93098 351 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 GTF3C6Q969F1 213 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 VWCEQ96DN2 955 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 MXRA8Q9BRK3 442 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 HIPK3Q9H422 1215 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 EHMT1Q9H9B1 1298 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 C6orf50Q9HD87 102 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 JADE2Q9NQC1 790 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 KCNH7Q9NS40 1196 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 HDAC6Q9UBN7 1215 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 KCNJ14Q9UNX9 436 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 PTPRSQ13332 1948 aa8.17□□□□□ -1.1
UBE4B-209ENST00000487244 IGLV3-22A0A075B6J6 115 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 A0A1W2PPC1 479 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 GSTTP1A0A1W2PQM5 241 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 M0R2N6 131 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 NOP56O00567 594 aaKnown RBP8.16□□□□□ -1.1
UBE4B-209ENST00000487244 PPFIA4O75335 1185 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 DEXIO95424 95 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 ACRP10323 421 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 FDPSP14324 419 aaKnown RBP8.16□□□□□ -1.1
UBE4B-209ENST00000487244 NLRP5P59047 1200 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 NEDD9Q14511 834 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 ANKRD1Q15327 319 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 PTGISQ16647 500 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 CEP55Q53EZ4 464 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 UTP14CQ5TAP6 766 aaKnown RBP8.16□□□□□ -1.1
UBE4B-209ENST00000487244 MFSD5Q6N075 450 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 LOXHD1Q8IVV2 1947 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 CCDC148Q8NFR7 591 aa8.16□□□□□ -1.1
UBE4B-209ENST00000487244 CCDC12Q8WUD4 166 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms