RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 DIS3L2Q8IYB7 885 aaKnown RBP11.57□□□□□ -0.56
NEK4-204ENST00000487068 OXER1Q8TDS5 423 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 ATP6V0A1Q93050 837 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 SCLYQ96I15 445 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 RNPC3Q96LT9 517 aaKnown RBP11.57□□□□□ -0.56
NEK4-204ENST00000487068 LLPHQ9BRT6 129 aaKnown RBP11.57□□□□□ -0.56
NEK4-204ENST00000487068 TEKT3Q9BXF9 490 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 SMARCAD1Q9H4L7 1026 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 TBC1D22BQ9NU19 505 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 ERAP1Q9NZ08 941 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 DDX25Q9UHL0 483 aaKnown RBP11.57□□□□□ -0.56
NEK4-204ENST00000487068 KIF3AQ9Y496 699 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 EMSYQ7Z589 1322 aa11.57□□□□□ -0.56
NEK4-204ENST00000487068 GSTTP1A0A1W2PQM5 241 aa11.56□□□□□ -0.56
NEK4-204ENST00000487068 HAS3O00219 553 aa11.56□□□□□ -0.56
NEK4-204ENST00000487068 CCNT1O60563 726 aaKnown RBP11.56□□□□□ -0.56
NEK4-204ENST00000487068 GAS7O60861 476 aa11.56□□□□□ -0.56
NEK4-204ENST00000487068 ACRP10323 421 aa11.56□□□□□ -0.56
NEK4-204ENST00000487068 GNAT1P11488 350 aa11.56□□□□□ -0.56
NEK4-204ENST00000487068 MCM2P49736 904 aa11.56□□□□□ -0.56
NEK4-204ENST00000487068 IGBP1P78318 339 aa11.56□□□□□ -0.56
NEK4-204ENST00000487068 KRT76Q01546 638 aa11.56□□□□□ -0.56
NEK4-204ENST00000487068 PPFIA1Q13136 1202 aa11.56□□□□□ -0.56
NEK4-204ENST00000487068 NR5A1Q13285 461 aa11.56□□□□□ -0.56
NEK4-204ENST00000487068 SHHQ15465 462 aa11.56□□□□□ -0.56
NEK4-204ENST00000487068 NPY5RQ15761 445 aa11.56□□□□□ -0.56
NEK4-204ENST00000487068 LRCH2Q5VUJ6 765 aa11.56□□□□□ -0.56
NEK4-204ENST00000487068 FAM160B1Q5W0V3 765 aa11.56□□□□□ -0.56
NEK4-204ENST00000487068 KRT40Q6A162 431 aa11.56□□□□□ -0.56
NEK4-204ENST00000487068 MIS18BP1Q6P0N0 1132 aa11.56□□□□□ -0.56
NEK4-204ENST00000487068 TRMT1LQ7Z2T5 733 aaKnown RBP11.56□□□□□ -0.56
NEK4-204ENST00000487068 DEFB128Q7Z7B8 93 aa11.56□□□□□ -0.56
NEK4-204ENST00000487068 SESTD1Q86VW0 696 aa11.56□□□□□ -0.56
NEK4-204ENST00000487068 CRYGNQ8WXF5 182 aa11.56□□□□□ -0.56
NEK4-204ENST00000487068 NAP1L4Q99733 375 aaKnown RBP11.56□□□□□ -0.56
NEK4-204ENST00000487068 ZBBXA8MT70 800 aa11.55□□□□□ -0.56
NEK4-204ENST00000487068 M0R2N6 131 aa11.55□□□□□ -0.56
NEK4-204ENST00000487068 CD2BP2O95400 341 aaKnown RBP11.55□□□□□ -0.56
NEK4-204ENST00000487068 GCFC2P16383 781 aaKnown RBP11.55□□□□□ -0.56
NEK4-204ENST00000487068 CIITAP33076 1130 aa11.55□□□□□ -0.56
NEK4-204ENST00000487068 SMAD3P84022 425 aaKnown RBP11.55□□□□□ -0.56
NEK4-204ENST00000487068 ZNF200P98182 395 aaPredicted RBP11.55□□□□□ -0.56
NEK4-204ENST00000487068 C9orf50Q5SZB4 431 aa11.55□□□□□ -0.56
NEK4-204ENST00000487068 PSRC1Q6PGN9 363 aaPredicted RBP11.55□□□□□ -0.56
NEK4-204ENST00000487068 IL27Q8NEV9 243 aa11.55□□□□□ -0.56
NEK4-204ENST00000487068 CAGE1Q8TC20 777 aa11.55□□□□□ -0.56
NEK4-204ENST00000487068 LMBR1Q8WVP7 490 aa11.55□□□□□ -0.56
NEK4-204ENST00000487068 MYLIPQ8WY64 445 aa11.55□□□□□ -0.56
NEK4-204ENST00000487068 TNPO1Q92973 898 aaKnown RBP11.55□□□□□ -0.56
NEK4-204ENST00000487068 TMX3Q96JJ7 454 aa11.55□□□□□ -0.56
NEK4-204ENST00000487068 FTOQ9C0B1 505 aaKnown RBP eCLIP11.55□□□□□ -0.56
NEK4-204ENST00000487068 WNT8AQ9H1J5 351 aa11.55□□□□□ -0.56
NEK4-204ENST00000487068 MTIF3Q9H2K0 278 aaKnown RBP11.55□□□□□ -0.56
NEK4-204ENST00000487068 SEMA6BQ9H3T3 888 aa11.55□□□□□ -0.56
NEK4-204ENST00000487068 PRDM6Q9NQX0 595 aa11.55□□□□□ -0.56
NEK4-204ENST00000487068 ZNF302Q9NR11 478 aa11.55□□□□□ -0.56
NEK4-204ENST00000487068 SETD4Q9NVD3 440 aa11.55□□□□□ -0.56
NEK4-204ENST00000487068 FAM205CA6NFA0 338 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 WDR64B1ANS9 1081 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 BTBD18B2RXH4 712 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 PITPNM1O00562 1244 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 MSH4O15457 936 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 SLC37A4O43826 429 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 CCNE2O96020 404 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 PSAPP07602 524 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 CTSHP09668 335 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 FOSL2P15408 326 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 ATP2B1P20020 1258 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 THPOP40225 353 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 STAT5BP51692 787 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 PTK7Q13308 1070 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 GRIK4Q16099 956 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 Q4G0T1 1027 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 ZNF746Q6NUN9 644 aaPredicted RBP11.54□□□□□ -0.56
NEK4-204ENST00000487068 PDXDC2PQ6P474 469 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 MOXD1Q6UVY6 613 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 LRRC8DQ7L1W4 858 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 SMAP1Q8IYB5 467 aaPredicted RBP11.54□□□□□ -0.56
NEK4-204ENST00000487068 RPUSD2Q8IZ73 545 aaKnown RBP11.54□□□□□ -0.56
NEK4-204ENST00000487068 AFAP1L1Q8TED9 768 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 SYMPKQ92797 1274 aaKnown RBP11.54□□□□□ -0.56
NEK4-204ENST00000487068 GJA10Q969M2 543 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 LENG9Q96B70 501 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 RNPEPQ9H4A4 650 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 IL23AQ9NPF7 189 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 TUBE1Q9UJT0 475 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 NLRC5Q86WI3 1866 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 NRCAMQ92823 1304 aa11.54□□□□□ -0.56
NEK4-204ENST00000487068 EYSQ5T1H1 3165 aa11.53□□□□□ -0.56
NEK4-204ENST00000487068 MYO9BQ13459 2157 aa11.53□□□□□ -0.56
NEK4-204ENST00000487068 LAMA2P24043 3122 aaKnown RBP11.53□□□□□ -0.56
NEK4-204ENST00000487068 H3BQV1 296 aa11.53□□□□□ -0.56
NEK4-204ENST00000487068 RIOK3O14730 519 aaKnown RBP11.53□□□□□ -0.56
NEK4-204ENST00000487068 TREHO43280 583 aa11.53□□□□□ -0.56
NEK4-204ENST00000487068 ACTN1P12814 892 aa11.53□□□□□ -0.56
NEK4-204ENST00000487068 SELPP16109 830 aa11.53□□□□□ -0.56
NEK4-204ENST00000487068 JAK3P52333 1124 aa11.53□□□□□ -0.56
NEK4-204ENST00000487068 EPHB4P54760 987 aa11.53□□□□□ -0.56
NEK4-204ENST00000487068 SWSAP1Q6NVH7 229 aa11.53□□□□□ -0.56
NEK4-204ENST00000487068 MIER3Q7Z3K6 550 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms