RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 MAP3K14Q99558 947 aa7.44□□□□□ -1.22
CTDSPL-208ENST00000486978 AMNQ9BXJ7 453 aa7.44□□□□□ -1.22
CTDSPL-208ENST00000486978 WDR11Q9BZH6 1224 aa7.44□□□□□ -1.22
CTDSPL-208ENST00000486978 RIOX1Q9H6W3 641 aa7.44□□□□□ -1.22
CTDSPL-208ENST00000486978 LY9Q9HBG7 655 aa7.44□□□□□ -1.22
CTDSPL-208ENST00000486978 BMP2KQ9NSY1 1161 aaPredicted RBP7.44□□□□□ -1.22
CTDSPL-208ENST00000486978 DLL3Q9NYJ7 618 aa7.44□□□□□ -1.22
CTDSPL-208ENST00000486978 CDH22Q9UJ99 828 aa7.44□□□□□ -1.22
CTDSPL-208ENST00000486978 BARX2Q9UMQ3 279 aaPredicted RBP7.44□□□□□ -1.22
CTDSPL-208ENST00000486978 USP15Q9Y4E8 981 aaPredicted RBP7.44□□□□□ -1.22
CTDSPL-208ENST00000486978 FANCMQ8IYD8 2048 aa7.44□□□□□ -1.22
CTDSPL-208ENST00000486978 FASNP49327 2511 aaKnown RBP7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 SH2B2O14492 632 aaPredicted RBP7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 PPP1R11O60927 126 aaPredicted RBP7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 ARIH2O95376 493 aa7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 SP100P23497 879 aaPredicted RBP7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 ICAM3P32942 547 aa7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 TIE1P35590 1138 aa7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 HSD17B4P51659 736 aa7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 RBL2Q08999 1139 aa7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 TRAF1Q13077 416 aa7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 SLC35G1Q2M3R5 365 aa7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 NFXL1Q6ZNB6 911 aa7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 HOMER1Q86YM7 354 aa7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 ZNF654Q8IZM8 581 aa7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 TMTC2Q8N394 836 aa7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 SAMD3Q8N6K7 520 aa7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 VN1R2Q8NFZ6 395 aa7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 CAGE1Q8TC20 777 aa7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 SYTL5Q8TDW5 730 aaPredicted RBP7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 NSUN6Q8TEA1 469 aaKnown RBP7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 TBC1D5Q92609 795 aa7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 TOP1MTQ969P6 601 aa7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 GPHNQ9NQX3 736 aaPredicted RBP7.43□□□□□ -1.22
CTDSPL-208ENST00000486978 LOC400499M0QZD8 3231 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 PNMA6FA0A0J9YX94 578 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 CCDC69A6NI79 296 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 A6NJR5 290 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 C5orf67F2Z3F1 127 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 OPLAHO14841 1288 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 NKRFO15226 690 aaKnown RBP eCLIP7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 NCK2O43639 380 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 CYTH3O43739 400 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 BRD1O95696 1058 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 CFBP00751 764 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 CALM1P0DP23 149 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 CALM2P0DP24 149 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 CALM3P0DP25 149 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 KIF5BP33176 963 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 CTNNB1P35222 781 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 LIFRP42702 1097 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 NDUFV1P49821 464 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 GNAQP50148 359 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 GHRHRQ02643 423 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 PTPN11Q06124 597 aaPredicted RBP7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 COASYQ13057 564 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 COL9A3Q14050 684 aaPredicted RBP7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 PUM1Q14671 1186 aaKnown RBP eCLIP7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 PPP2R5BQ15173 497 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 RSPO4Q2I0M5 234 aaPredicted RBP7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 ASTLQ6HA08 431 aaPredicted RBP7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 CTCFLQ8NI51 663 aaPredicted RBP7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 SCFD2Q8WU76 684 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 SUSD6Q92537 303 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 SAMD11Q96NU1 681 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 NEK1Q96PY6 1258 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 TAAR1Q96RJ0 339 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 PIGSQ96S52 555 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 IWS1Q96ST2 819 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 RMDN3Q96TC7 470 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 MYL10Q9BUA6 226 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 PHF7Q9BWX1 381 aaPredicted RBP7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 SPZ1Q9BXG8 430 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 MAP3K20Q9NYL2 800 aaKnown RBP7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 COL20A1Q9P218 1284 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 HDAC6Q9UBN7 1215 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 NOD1Q9Y239 953 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 PCDHA1Q9Y5I3 950 aa7.42□□□□□ -1.22
CTDSPL-208ENST00000486978 TTLL13PA6NNM8 815 aa7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 TXNP10599 105 aaKnown RBP7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 EIF2AK2P19525 551 aaKnown RBP7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 SMARCA1P28370 1054 aa7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 BMPR1AP36894 532 aa7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 CPT1AP50416 773 aa7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 KRT32Q14532 448 aa7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 STXBP2Q15833 593 aa7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 TSGA10IPQ3SY00 556 aa7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 PLEKHG4Q58EX7 1191 aa7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 ARHGEF16Q5VV41 709 aa7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 CWF19L1Q69YN2 538 aaKnown RBP7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 RBM23Q86U06 439 aaKnown RBP7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 SGMS1Q86VZ5 419 aa7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 CRIPAKQ8N1N5 446 aa7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 KREMEN2Q8NCW0 462 aa7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 RRP36Q96EU6 259 aaKnown RBP7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 YME1L1Q96TA2 773 aa7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 LZTS2Q9BRK4 669 aa7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 LRRC2Q9BYS8 371 aa7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 PXMP2Q9NR77 195 aa7.41□□□□□ -1.22
CTDSPL-208ENST00000486978 SEC63Q9UGP8 760 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms