RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 MSCO60682 206 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 SLITRK3O94933 977 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 LYPLA2O95372 231 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 P4HBP07237 508 aaKnown RBP10.74□□□□□ -0.69
MCF2L-227ENST00000486806 PSAPP07602 524 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 RARBP10826 455 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 LIG1P18858 919 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 CST5P28325 142 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-227ENST00000486806 TXLNAP40222 546 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 UBA7P41226 1012 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 CYP4A11Q02928 519 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 FAM160A1Q05DH4 1040 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 SNW1Q13573 536 aaKnown RBP10.74□□□□□ -0.69
MCF2L-227ENST00000486806 NFKBIBQ15653 356 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 NAALADL2Q58DX5 795 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 LHX8Q68G74 356 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 POTEGQ6S5H5 508 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 FMR1NBQ8N0W7 255 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-227ENST00000486806 ENGASEQ8NFI3 743 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 GPT2Q8TD30 523 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 DYDC2Q96IM9 177 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 ZNF333Q96JL9 665 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.74□□□□□ -0.69
MCF2L-227ENST00000486806 HMX1Q9NP08 348 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-227ENST00000486806 FAM13BQ9NYF5 915 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 KCNH3Q9ULD8 1083 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 SAMM50Q9Y512 469 aa10.74□□□□□ -0.69
MCF2L-227ENST00000486806 MAFBQ9Y5Q3 323 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-227ENST00000486806 DYNC1LI2O43237 492 aaPredicted RBP10.73□□□□□ -0.69
MCF2L-227ENST00000486806 ZNF862O60290 1169 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 LGALS2P05162 132 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 PLCG1P19174 1290 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 PTMSP20962 102 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 CNGA1P29973 690 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 CCT6AP40227 531 aaKnown RBP10.73□□□□□ -0.69
MCF2L-227ENST00000486806 QARSP47897 775 aaKnown RBP10.73□□□□□ -0.69
MCF2L-227ENST00000486806 CPT1AP50416 773 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 PSMC5P62195 406 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 IRX5P78411 483 aaPredicted RBP10.73□□□□□ -0.69
MCF2L-227ENST00000486806 CTTNQ14247 550 aaKnown RBP10.73□□□□□ -0.69
MCF2L-227ENST00000486806 FSCN1Q16658 493 aaKnown RBP10.73□□□□□ -0.69
MCF2L-227ENST00000486806 KCNK18Q7Z418 384 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 TRIM50Q86XT4 487 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 C4orf19Q8IY42 314 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 KCTD17Q8N5Z5 321 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 BANK1Q8NDB2 785 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 KLHDC9Q8NEP7 349 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 ATP6V0A1Q93050 837 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 C16orf70Q9BSU1 422 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 NT5C3AQ9H0P0 336 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 AP5M1Q9H0R1 490 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 UNC93B1Q9H1C4 597 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 XPNPEP3Q9NQH7 507 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 ZNF302Q9NR11 478 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 BLOC1S4Q9NUP1 217 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 GABBR1Q9UBS5 961 aa10.73□□□□□ -0.69
MCF2L-227ENST00000486806 POLR2DO15514 142 aaKnown RBP10.72□□□□□ -0.69
MCF2L-227ENST00000486806 ACTN4O43707 911 aaKnown RBP10.72□□□□□ -0.69
MCF2L-227ENST00000486806 PPFIA4O75335 1185 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 NR1I2O75469 434 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 STBD1O95210 358 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 MBD3O95983 291 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 PGK1P00558 417 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 F2P00734 622 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 ATP4AP20648 1035 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 SYKP43405 635 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 SLC26A2P50443 739 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 PRKCEQ02156 737 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 MTFR1Q15390 333 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 DGKDQ16760 1214 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 CCSAPQ6IQ19 270 aaPredicted RBP10.72□□□□□ -0.69
MCF2L-227ENST00000486806 SWSAP1Q6NVH7 229 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 PDXDC2PQ6P474 469 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 CCDC73Q6ZRK6 1079 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 PLPPR4Q7Z2D5 763 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 PDILTQ8N807 584 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 CALML4Q96GE6 196 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 PYM1Q9BRP8 204 aaKnown RBP10.72□□□□□ -0.69
MCF2L-227ENST00000486806 ZSWIM4Q9H7M6 989 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 DDX19AQ9NUU7 478 aaKnown RBP10.72□□□□□ -0.69
MCF2L-227ENST00000486806 STK17AQ9UEE5 414 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 CCDC39Q9UFE4 941 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 KIAA1024Q9UPX6 916 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 DOCK5Q9H7D0 1870 aa10.72□□□□□ -0.69
MCF2L-227ENST00000486806 BACH1O14867 736 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 DKC1O60832 514 aaKnown RBP eCLIP10.71□□□□□ -0.698e-9■■■■■ 41.5
MCF2L-227ENST00000486806 ZNF202O95125 648 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 OATP04181 439 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 C6orf222P0C671 652 aaPredicted RBP10.71□□□□□ -0.69
MCF2L-227ENST00000486806 ZNF286BP0CG31 522 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 CCL5P13501 91 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 STAT6P42226 847 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 STAT5BP51692 787 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 PURAQ00577 322 aaKnown RBP10.71□□□□□ -0.69
MCF2L-227ENST00000486806 BEX3Q00994 111 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 TPRNQ4KMQ1 711 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 RRAGBQ5VZM2 374 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 FAM160B1Q5W0V3 765 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 TPH2Q8IWU9 490 aa10.71□□□□□ -0.69
MCF2L-227ENST00000486806 IQUBQ8NA54 791 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms