RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 RMDN3Q96TC7 470 aa11.43□□□□□ -0.58
SND1-213ENST00000486037 TMEM47Q9BQJ4 181 aa11.43□□□□□ -0.58
SND1-213ENST00000486037 POMKQ9H5K3 350 aa11.43□□□□□ -0.58
SND1-213ENST00000486037 EHMT1Q9H9B1 1298 aa11.43□□□□□ -0.58
SND1-213ENST00000486037 HCSTQ9UBK5 93 aa11.43□□□□□ -0.58
SND1-213ENST00000486037 R4GN57 208 aa11.43□□□□□ -0.58
SND1-213ENST00000486037 GPR179Q6PRD1 2367 aa11.43□□□□□ -0.58
SND1-213ENST00000486037 B4DLN1 442 aa11.42□□□□□ -0.58
SND1-213ENST00000486037 RNF113AO15541 343 aaKnown RBP11.42□□□□□ -0.58
SND1-213ENST00000486037 CAND2O75155 1236 aa11.42□□□□□ -0.58
SND1-213ENST00000486037 PPFIA4O75335 1185 aa11.42□□□□□ -0.58
SND1-213ENST00000486037 GGPS1O95749 300 aa11.42□□□□□ -0.58
SND1-213ENST00000486037 LMNAP02545 664 aaKnown RBP11.42□□□□□ -0.58
SND1-213ENST00000486037 LGALS2P05162 132 aa11.42□□□□□ -0.58
SND1-213ENST00000486037 PDHBP11177 359 aa11.42□□□□□ -0.58
SND1-213ENST00000486037 TECP42680 631 aa11.42□□□□□ -0.58
SND1-213ENST00000486037 CLCN5P51795 746 aa11.42□□□□□ -0.58
SND1-213ENST00000486037 MRPL12P52815 198 aaKnown RBP11.42□□□□□ -0.58
SND1-213ENST00000486037 ADAM17P78536 824 aa11.42□□□□□ -0.58
SND1-213ENST00000486037 MGAT3Q09327 533 aa11.42□□□□□ -0.58
SND1-213ENST00000486037 NAALADL2Q58DX5 795 aa11.42□□□□□ -0.58
SND1-213ENST00000486037 LLGL2Q6P1M3 1020 aa11.42□□□□□ -0.58
SND1-213ENST00000486037 CCDC105Q8IYK2 499 aa11.42□□□□□ -0.58
SND1-213ENST00000486037 KBTBD3Q8NAB2 608 aa11.42□□□□□ -0.58
SND1-213ENST00000486037 RGS22Q8NE09 1264 aa11.42□□□□□ -0.58
SND1-213ENST00000486037 RBM19Q9Y4C8 960 aaKnown RBP11.42□□□□□ -0.58
SND1-213ENST00000486037 ASPMQ8IZT6 3477 aa11.42□□□□□ -0.58
SND1-213ENST00000486037 ATRXP46100 2492 aa11.41□□□□□ -0.58
SND1-213ENST00000486037 H3BRB1 525 aa11.41□□□□□ -0.58
SND1-213ENST00000486037 EIF3JO75822 258 aaKnown RBP11.41□□□□□ -0.58
SND1-213ENST00000486037 NR3C2P08235 984 aa11.41□□□□□ -0.58
SND1-213ENST00000486037 WEE2P0C1S8 567 aa11.41□□□□□ -0.58
SND1-213ENST00000486037 GOLGA8HP0CJ92 632 aa11.41□□□□□ -0.58
SND1-213ENST00000486037 GNAT2P19087 354 aa11.41□□□□□ -0.58
SND1-213ENST00000486037 UBA1P22314 1058 aaKnown RBP11.41□□□□□ -0.58
SND1-213ENST00000486037 ZNF543Q08ER8 600 aa11.41□□□□□ -0.58
SND1-213ENST00000486037 APOBRQ0VD83 1088 aa11.41□□□□□ -0.58
SND1-213ENST00000486037 ST3GAL2Q16842 350 aa11.41□□□□□ -0.58
SND1-213ENST00000486037 RSPO4Q2I0M5 234 aaPredicted RBP11.41□□□□□ -0.58
SND1-213ENST00000486037 TRIM50Q86XT4 487 aa11.41□□□□□ -0.58
SND1-213ENST00000486037 CMTR2Q8IYT2 770 aaKnown RBP11.41□□□□□ -0.58
SND1-213ENST00000486037 IL31RAQ8NI17 732 aa11.41□□□□□ -0.58
SND1-213ENST00000486037 MICAL1Q8TDZ2 1067 aa11.41□□□□□ -0.58
SND1-213ENST00000486037 IWS1Q96ST2 819 aa11.41□□□□□ -0.58
SND1-213ENST00000486037 UBA5Q9GZZ9 404 aa11.41□□□□□ -0.58
SND1-213ENST00000486037 MFSD1Q9H3U5 465 aa11.41□□□□□ -0.58
SND1-213ENST00000486037 TUT1Q9H6E5 874 aaKnown RBP11.41□□□□□ -0.58
SND1-213ENST00000486037 PXMP2Q9NR77 195 aa11.41□□□□□ -0.58
SND1-213ENST00000486037 FSCN2O14926 492 aa11.4□□□□□ -0.58
SND1-213ENST00000486037 RANBP6O60518 1105 aaKnown RBP11.4□□□□□ -0.58
SND1-213ENST00000486037 AOC1P19801 751 aa11.4□□□□□ -0.58
SND1-213ENST00000486037 CHMLP26374 656 aa11.4□□□□□ -0.58
SND1-213ENST00000486037 ARHGEF16Q5VV41 709 aa11.4□□□□□ -0.58
SND1-213ENST00000486037 TMEM184AQ6ZMB5 413 aa11.4□□□□□ -0.58
SND1-213ENST00000486037 DTWD2Q8NBA8 298 aa11.4□□□□□ -0.58
SND1-213ENST00000486037 CYP2W1Q8TAV3 490 aa11.4□□□□□ -0.58
SND1-213ENST00000486037 LMBR1Q8WVP7 490 aa11.4□□□□□ -0.58
SND1-213ENST00000486037 EVI5LQ96CN4 794 aa11.4□□□□□ -0.58
SND1-213ENST00000486037 NAPBQ9H115 298 aa11.4□□□□□ -0.58
SND1-213ENST00000486037 AGO3Q9H9G7 860 aaKnown RBP11.4□□□□□ -0.58
SND1-213ENST00000486037 HIDE1A8MVS5 230 aa11.39□□□□□ -0.59
SND1-213ENST00000486037 OPLAHO14841 1288 aa11.39□□□□□ -0.59
SND1-213ENST00000486037 SNHG28P0DPA3 235 aa11.39□□□□□ -0.59
SND1-213ENST00000486037 MYCLP12524 364 aaPredicted RBP11.39□□□□□ -0.59
SND1-213ENST00000486037 CD52P31358 61 aa11.39□□□□□ -0.59
SND1-213ENST00000486037 ARHGAP4P98171 946 aa11.39□□□□□ -0.59
SND1-213ENST00000486037 COL9A2Q14055 689 aaPredicted RBP11.39□□□□□ -0.59
SND1-213ENST00000486037 CDC37Q16543 378 aaPredicted RBP11.39□□□□□ -0.59
SND1-213ENST00000486037 PPP4R3BQ5MIZ7 849 aa11.39□□□□□ -0.59
SND1-213ENST00000486037 FBXO47Q5MNV8 452 aa11.39□□□□□ -0.59
SND1-213ENST00000486037 PLPP4Q5VZY2 271 aa11.39□□□□□ -0.59
SND1-213ENST00000486037 RIN2Q8WYP3 895 aaPredicted RBP11.39□□□□□ -0.59
SND1-213ENST00000486037 ZBTB10Q96DT7 871 aa11.39□□□□□ -0.59
SND1-213ENST00000486037 DOCK5Q9H7D0 1870 aa11.39□□□□□ -0.59
SND1-213ENST00000486037 LIMD1Q9UGP4 676 aa11.39□□□□□ -0.59
SND1-213ENST00000486037 SLC3A2P08195 630 aaKnown RBP11.38□□□□□ -0.59
SND1-213ENST00000486037 TOP1P11387 765 aaKnown RBP11.38□□□□□ -0.59
SND1-213ENST00000486037 MFAP1P55081 439 aaKnown RBP11.38□□□□□ -0.59
SND1-213ENST00000486037 KANK3Q6NY19 840 aa11.38□□□□□ -0.59
SND1-213ENST00000486037 CDCA3Q99618 268 aaPredicted RBP11.38□□□□□ -0.59
SND1-213ENST00000486037 PDCD2LQ9BRP1 358 aa11.38□□□□□ -0.59
SND1-213ENST00000486037 NR2E1Q9Y466 385 aa11.38□□□□□ -0.59
SND1-213ENST00000486037 FGF18O76093 207 aa11.37□□□□□ -0.59
SND1-213ENST00000486037 HOXB3P14651 431 aaPredicted RBP11.37□□□□□ -0.59
SND1-213ENST00000486037 IBSPP21815 317 aaPredicted RBP11.37□□□□□ -0.59
SND1-213ENST00000486037 NPAS4Q8IUM7 802 aa11.37□□□□□ -0.59
SND1-213ENST00000486037 HINFPQ9BQA5 517 aa11.37□□□□□ -0.59
SND1-213ENST00000486037 ESYT1Q9BSJ8 1104 aa11.37□□□□□ -0.59
SND1-213ENST00000486037 NACAP1Q9BZK3 213 aa11.37□□□□□ -0.59
SND1-213ENST00000486037 IL25Q9H293 177 aa11.37□□□□□ -0.59
SND1-213ENST00000486037 MLXIPQ9HAP2 919 aa11.37□□□□□ -0.59
SND1-213ENST00000486037 ERVK-5Q9HDB9 667 aa11.37□□□□□ -0.59
SND1-213ENST00000486037 PNMA2Q9UL42 364 aa11.37□□□□□ -0.59
SND1-213ENST00000486037 CDY2AQ9Y6F7 541 aa11.37□□□□□ -0.59
SND1-213ENST00000486037 ABCB11O95342 1321 aa11.36□□□□□ -0.59
SND1-213ENST00000486037 FNDC1Q4ZHG4 1894 aaPredicted RBP11.36□□□□□ -0.59
SND1-213ENST00000486037 ORC4O43929 436 aa11.36□□□□□ -0.59
SND1-213ENST00000486037 ATXN1P54253 815 aaKnown RBP11.36□□□□□ -0.59
SND1-213ENST00000486037 SEMA3FQ13275 785 aa11.36□□□□□ -0.59
SND1-213ENST00000486037 UTP14CQ5TAP6 766 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms