RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 LTBP2Q14767 1821 aa13.36□□□□□ -0.27
HPS4-214ENST00000485842 MYH9P35579 1960 aaKnown RBP13.36□□□□□ -0.27
HPS4-214ENST00000485842 TRIP12Q14669 1992 aaPredicted RBP13.35□□□□□ -0.27
HPS4-214ENST00000485842 C17orf102A2RUQ5 167 aa13.35□□□□□ -0.27
HPS4-214ENST00000485842 TRIM43BA6NCK2 446 aa13.35□□□□□ -0.27
HPS4-214ENST00000485842 OR52Z1P0C646 297 aa13.35□□□□□ -0.27
HPS4-214ENST00000485842 CYP2C9P11712 490 aa13.35□□□□□ -0.27
HPS4-214ENST00000485842 SFNP31947 248 aa13.35□□□□□ -0.27
HPS4-214ENST00000485842 TOB1P50616 345 aaPredicted RBP13.35□□□□□ -0.27
HPS4-214ENST00000485842 ZNF200P98182 395 aaPredicted RBP13.35□□□□□ -0.27
HPS4-214ENST00000485842 ORC2Q13416 577 aaPredicted RBP13.35□□□□□ -0.27
HPS4-214ENST00000485842 BECN1Q14457 450 aa13.35□□□□□ -0.27
HPS4-214ENST00000485842 PLCB4Q15147 1175 aa13.35□□□□□ -0.27
HPS4-214ENST00000485842 RILPL1Q5EBL4 403 aa13.35□□□□□ -0.27
HPS4-214ENST00000485842 NCAPH2Q6IBW4 605 aa13.35□□□□□ -0.27
HPS4-214ENST00000485842 PDXDC2PQ6P474 469 aa13.35□□□□□ -0.27
HPS4-214ENST00000485842 TRMT1LQ7Z2T5 733 aaKnown RBP13.35□□□□□ -0.27
HPS4-214ENST00000485842 SESTD1Q86VW0 696 aa13.35□□□□□ -0.27
HPS4-214ENST00000485842 CKAP2LQ8IYA6 745 aa13.35□□□□□ -0.27
HPS4-214ENST00000485842 TRIM43Q96BQ3 446 aaPredicted RBP13.35□□□□□ -0.27
HPS4-214ENST00000485842 SETD4Q9NVD3 440 aa13.35□□□□□ -0.27
HPS4-214ENST00000485842 GABBR1Q9UBS5 961 aa13.35□□□□□ -0.27
HPS4-214ENST00000485842 VAV3Q9UKW4 847 aa13.35□□□□□ -0.27
HPS4-214ENST00000485842 TBX21Q9UL17 535 aa13.35□□□□□ -0.27
HPS4-214ENST00000485842 PCDHB6Q9Y5E3 794 aa13.35□□□□□ -0.27
HPS4-214ENST00000485842 KAT6AQ92794 2004 aa13.35□□□□□ -0.27
HPS4-214ENST00000485842 DNAH12Q6ZR08 3092 aa13.34□□□□□ -0.27
HPS4-214ENST00000485842 CEP290O15078 2479 aa13.34□□□□□ -0.27
HPS4-214ENST00000485842 IGKV6D-21A0A0A0MT36 114 aa13.34□□□□□ -0.27
HPS4-214ENST00000485842 EML1O00423 815 aa13.34□□□□□ -0.27
HPS4-214ENST00000485842 KIAA0355O15063 1070 aa13.34□□□□□ -0.27
HPS4-214ENST00000485842 STX6O43752 255 aa13.34□□□□□ -0.27
HPS4-214ENST00000485842 RAG1P15918 1043 aa13.34□□□□□ -0.27
HPS4-214ENST00000485842 KCNA4P22459 653 aa13.34□□□□□ -0.27
HPS4-214ENST00000485842 TXKP42681 527 aa13.34□□□□□ -0.27
HPS4-214ENST00000485842 IGBP1P78318 339 aa13.34□□□□□ -0.27
HPS4-214ENST00000485842 PPFIA1Q13136 1202 aa13.34□□□□□ -0.27
HPS4-214ENST00000485842 PPP2R5CQ13362 524 aa13.34□□□□□ -0.27
HPS4-214ENST00000485842 HIC1Q14526 733 aa13.34□□□□□ -0.27
HPS4-214ENST00000485842 PLPPR4Q7Z2D5 763 aa13.34□□□□□ -0.27
HPS4-214ENST00000485842 BRAPQ7Z569 592 aa13.34□□□□□ -0.27
HPS4-214ENST00000485842 HIPK3Q9H422 1215 aa13.34□□□□□ -0.27
HPS4-214ENST00000485842 TTC12Q9H892 705 aaPredicted RBP13.34□□□□□ -0.27
HPS4-214ENST00000485842 MTMR6Q9Y217 621 aa13.34□□□□□ -0.27
HPS4-214ENST00000485842 IGSF9BQ9UPX0 1349 aa13.34□□□□□ -0.27
HPS4-214ENST00000485842 POTEB3A0JP26 581 aa13.33□□□□□ -0.28
HPS4-214ENST00000485842 MDM2Q00987 491 aaPredicted RBP13.33□□□□□ -0.28
HPS4-214ENST00000485842 RESTQ13127 1097 aa13.33□□□□□ -0.28
HPS4-214ENST00000485842 GRIK4Q16099 956 aa13.33□□□□□ -0.28
HPS4-214ENST00000485842 UGCGQ16739 394 aa13.33□□□□□ -0.28
HPS4-214ENST00000485842 FOXD4L5Q5VV16 416 aaPredicted RBP13.33□□□□□ -0.28
HPS4-214ENST00000485842 POTEBQ6S5H4 581 aa13.33□□□□□ -0.28
HPS4-214ENST00000485842 B3GNT9Q6UX72 402 aa13.33□□□□□ -0.28
HPS4-214ENST00000485842 BANK1Q8NDB2 785 aa13.33□□□□□ -0.28
HPS4-214ENST00000485842 RDM1Q8NG50 284 aa13.33□□□□□ -0.28
HPS4-214ENST00000485842 AFAP1L1Q8TED9 768 aa13.33□□□□□ -0.28
HPS4-214ENST00000485842 ATP8B4Q8TF62 1192 aa13.33□□□□□ -0.28
HPS4-214ENST00000485842 LMBR1Q8WVP7 490 aa13.33□□□□□ -0.28
HPS4-214ENST00000485842 FOXD4L4Q8WXT5 416 aaPredicted RBP13.33□□□□□ -0.28
HPS4-214ENST00000485842 ATP6V0A1Q93050 837 aa13.33□□□□□ -0.28
HPS4-214ENST00000485842 LBHD1Q9BQE6 289 aaPredicted RBP13.33□□□□□ -0.28
HPS4-214ENST00000485842 NOC4LQ9BVI4 516 aaKnown RBP13.33□□□□□ -0.28
HPS4-214ENST00000485842 PCDHA12Q9UN75 941 aa13.33□□□□□ -0.28
HPS4-214ENST00000485842 UMODL1Q5DID0 1318 aa13.33□□□□□ -0.28
HPS4-214ENST00000485842 POTEMA6NI47 508 aa13.32□□□□□ -0.28
HPS4-214ENST00000485842 TREHO43280 583 aa13.32□□□□□ -0.28
HPS4-214ENST00000485842 GNAT1P11488 350 aa13.32□□□□□ -0.28
HPS4-214ENST00000485842 INSRRP14616 1297 aa13.32□□□□□ -0.28
HPS4-214ENST00000485842 ITGB8P26012 769 aa13.32□□□□□ -0.28
HPS4-214ENST00000485842 CYP2C18P33260 490 aa13.32□□□□□ -0.28
HPS4-214ENST00000485842 MAGEA10P43363 369 aaPredicted RBP13.32□□□□□ -0.28
HPS4-214ENST00000485842 SLC26A2P50443 739 aa13.32□□□□□ -0.28
HPS4-214ENST00000485842 PRKCEQ02156 737 aa13.32□□□□□ -0.28
HPS4-214ENST00000485842 SPIRE1Q08AE8 756 aa13.32□□□□□ -0.28
HPS4-214ENST00000485842 PTGDRQ13258 359 aa13.32□□□□□ -0.28
HPS4-214ENST00000485842 TMEM266Q2M3C6 531 aa13.32□□□□□ -0.28
HPS4-214ENST00000485842 PRPF38BQ5VTL8 546 aaKnown RBP13.32□□□□□ -0.28
HPS4-214ENST00000485842 CCDC155Q8N6L0 562 aa13.32□□□□□ -0.28
HPS4-214ENST00000485842 TRAPPC12Q8WVT3 735 aa13.32□□□□□ -0.28
HPS4-214ENST00000485842 BADQ92934 168 aa13.32□□□□□ -0.28
HPS4-214ENST00000485842 MTMR9Q96QG7 549 aa13.32□□□□□ -0.28
HPS4-214ENST00000485842 CTAGE1Q96RT6 745 aa13.32□□□□□ -0.28
HPS4-214ENST00000485842 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.32□□□□□ -0.28
HPS4-214ENST00000485842 MAFBQ9Y5Q3 323 aaPredicted RBP13.32□□□□□ -0.28
HPS4-214ENST00000485842 NRCAMQ92823 1304 aa13.32□□□□□ -0.28
HPS4-214ENST00000485842 TANC1Q9C0D5 1861 aa13.31□□□□□ -0.28
HPS4-214ENST00000485842 ZNF862O60290 1169 aa13.31□□□□□ -0.28
HPS4-214ENST00000485842 HBP1O60381 514 aa13.31□□□□□ -0.28
HPS4-214ENST00000485842 TIMP1P01033 207 aa13.31□□□□□ -0.28
HPS4-214ENST00000485842 ATP4AP20648 1035 aa13.31□□□□□ -0.28
HPS4-214ENST00000485842 HOXC8P31273 242 aa13.31□□□□□ -0.28
HPS4-214ENST00000485842 CCL23P55773 120 aa13.31□□□□□ -0.28
HPS4-214ENST00000485842 CYP4A11Q02928 519 aa13.31□□□□□ -0.28
HPS4-214ENST00000485842 PTK7Q13308 1070 aa13.31□□□□□ -0.28
HPS4-214ENST00000485842 FAM173BQ6P4H8 233 aa13.31□□□□□ -0.28
HPS4-214ENST00000485842 DHX38Q92620 1227 aaKnown RBP13.31□□□□□ -0.28
HPS4-214ENST00000485842 TNPO1Q92973 898 aaKnown RBP13.31□□□□□ -0.28
HPS4-214ENST00000485842 WNT8BQ93098 351 aa13.31□□□□□ -0.28
HPS4-214ENST00000485842 ZBTB10Q96DT7 871 aa13.31□□□□□ -0.28
HPS4-214ENST00000485842 DYDC2Q96IM9 177 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms