RNA–Protein interactions for RNA: ENST00000485810.1

PRPF38B-205, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 2

Gene PRPF38B, Length 1,352 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-205ENST00000485810 UBOX5O94941 541 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 TPM2P07951 284 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 SYN1P17600 705 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 ATF3P18847 181 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 RRM1P23921 792 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 LTKP29376 864 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 CASQ1P31415 396 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 TMPOP42166 694 aaKnown RBP4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 PPM1FP49593 454 aaPredicted RBP4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 HMGN5P82970 282 aaKnown RBP4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 MAP2K1Q02750 393 aaPredicted RBP4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 WASHC5Q12768 1159 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 IDI1Q13907 227 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 SKOR2Q2VWA4 1001 aaPredicted RBP4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 SLC4A8Q2Y0W8 1093 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 FAM133BQ5BKY9 247 aaKnown RBP4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 C1QTNF12Q5T7M4 302 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 CCDC73Q6ZRK6 1079 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 HS2ST1Q7LGA3 356 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 MCF2L2Q86YR7 1114 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 ZNF654Q8IZM8 581 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 NDUFAF2Q8N183 169 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 RNF141Q8WVD5 230 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 ATRIPQ8WXE1 791 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 LINC01599Q8WXQ3 324 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 SRPK1Q96SB4 655 aaKnown RBP4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 UPF2Q9HAU5 1272 aaKnown RBP4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 EPB41L4AQ9HCS5 686 aaPredicted RBP4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 DDX41Q9UJV9 622 aaKnown RBP4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 KCNH3Q9ULD8 1083 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 CNOT6Q9ULM6 557 aaKnown RBP4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 ZNF652Q9Y2D9 606 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 AGLP35573 1532 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 KAT6BQ8WYB5 2073 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 ATP7BP35670 1465 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 YTHDC2Q9H6S0 1430 aaKnown RBP4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 KIF24Q5T7B8 1368 aa4.69□□□□□ -1.66
PRPF38B-205ENST00000485810 A0A1W2PRQ8 180 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 FITM1A5D6W6 292 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 FAM86C2PA6NEL3 165 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 FYB1O15117 783 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 IPO8O15397 1037 aaKnown RBP4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 FIBPO43427 364 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 RPN1P04843 607 aaKnown RBP4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 HNRNPCP07910 306 aaKnown RBP eCLIP4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 KCNA2P16389 499 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 CLK1P49759 484 aaKnown RBP4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 EPHB1P54762 984 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 GEMIN4P57678 1058 aaKnown RBP4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 NFKB2Q00653 900 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 CALD1Q05682 793 aaKnown RBP4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 DCTN1Q14203 1278 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 TAF11Q15544 211 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 LONRF1Q17RB8 773 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 HSP90B2PQ58FF3 399 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 TMEM132EQ6IEE7 984 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 KSR2Q6VAB6 950 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 SUGP1Q8IWZ8 645 aaKnown RBP4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 CPXCR1Q8N123 301 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 OXR1Q8N573 874 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 ARHGAP45Q92619 1136 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 FRAT1Q92837 279 aaPredicted RBP4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 E2F7Q96AV8 911 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 VWCEQ96DN2 955 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 CCDC34Q96HJ3 373 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 CDHR1Q96JP9 859 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 SELENOOQ9BVL4 669 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 TRIT1Q9H3H1 467 aaKnown RBP4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 KCNQ5Q9NR82 932 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 RTEL1Q9NZ71 1219 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 CLIC5Q9NZA1 410 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 MINPP1Q9UNW1 487 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 PPP2R3BQ9Y5P8 575 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 PREX1Q8TCU6 1659 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 FAM135BQ49AJ0 1406 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 YEATS2Q9ULM3 1422 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 NCOA3Q9Y6Q9 1424 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 AATKQ6ZMQ8 1374 aa4.68□□□□□ -1.66
PRPF38B-205ENST00000485810 RGS13O14921 159 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 FRAT2O75474 233 aaPredicted RBP4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 U2AF1L5P0DN76 240 aaPredicted RBP4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 TRIM27P14373 513 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 RAG1P15918 1043 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 ZNF131P52739 623 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 U2AF1Q01081 240 aaKnown RBP eCLIP4.67□□□□□ -1.669e-7■■■□□ 17.6
PRPF38B-205ENST00000485810 APOBRQ0VD83 1088 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 SNW1Q13573 536 aaKnown RBP4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 SIM2Q14190 667 aaPredicted RBP4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 SEPT2Q15019 361 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 NFE2Q16621 373 aaPredicted RBP4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 ACBD5Q5T8D3 534 aaPredicted RBP4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 OVOS1Q6IE37 1185 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 KLHL10Q6JEL2 608 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 GGT6Q6P531 493 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 ATF7IPQ6VMQ6 1270 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 TMC3Q7Z5M5 1100 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 CATIPQ7Z7H3 387 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 GGNQ86UU5 652 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 KIAA1958Q8N8K9 716 aa4.67□□□□□ -1.66
PRPF38B-205ENST00000485810 PPHLN1Q8NEY8 458 aaKnown RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms