RNA–Protein interactions for RNA: ENST00000485610.5

SMARCD3-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best)

Gene SMARCD3, Length 1,480 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-212ENST00000485610 PANK2Q9BZ23 570 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 RGL1Q9NZL6 768 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 STK17AQ9UEE5 414 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 PTPN22Q9Y2R2 807 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 POTEFA5A3E0 1075 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 SEPT4O43236 478 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 INHAP05111 366 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 HSDL1Q3SXM5 330 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 POTEGQ6S5H5 508 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 TLK2Q86UE8 772 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 KCTD17Q8N5Z5 321 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 SEPT1Q8WYJ6 367 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 TIGD1Q96MW7 591 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 PLIN2Q99541 437 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 CUEDC2Q9H467 287 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 Q9Y3F1 56 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 TELO2Q9Y4R8 837 aa19.86■□□□□ 0.77
SMARCD3-212ENST00000485610 IGSF9BQ9UPX0 1349 aa19.85■□□□□ 0.77
SMARCD3-212ENST00000485610 KAT6AQ92794 2004 aa19.85■□□□□ 0.77
SMARCD3-212ENST00000485610 MYH11P35749 1972 aa19.85■□□□□ 0.77
SMARCD3-212ENST00000485610 GSTTP1A0A1W2PQM5 241 aa19.85■□□□□ 0.77
SMARCD3-212ENST00000485610 ACTN4O43707 911 aaKnown RBP19.85■□□□□ 0.77
SMARCD3-212ENST00000485610 SLITRK3O94933 977 aa19.85■□□□□ 0.77
SMARCD3-212ENST00000485610 PTGS1P23219 599 aa19.85■□□□□ 0.77
SMARCD3-212ENST00000485610 QARSP47897 775 aaKnown RBP19.85■□□□□ 0.77
SMARCD3-212ENST00000485610 PSMC5P62195 406 aa19.85■□□□□ 0.77
SMARCD3-212ENST00000485610 CTTNQ14247 550 aaKnown RBP19.85■□□□□ 0.77
SMARCD3-212ENST00000485610 ECM1Q16610 540 aa19.85■□□□□ 0.77
SMARCD3-212ENST00000485610 CTU1Q7Z7A3 348 aaKnown RBP19.85■□□□□ 0.77
SMARCD3-212ENST00000485610 CCDC60Q8IWA6 550 aaPredicted RBP19.85■□□□□ 0.77
SMARCD3-212ENST00000485610 BANK1Q8NDB2 785 aa19.85■□□□□ 0.77
SMARCD3-212ENST00000485610 ATP6V0A1Q93050 837 aa19.85■□□□□ 0.77
SMARCD3-212ENST00000485610 SYAP1Q96A49 352 aaPredicted RBP19.85■□□□□ 0.77
SMARCD3-212ENST00000485610 ZSWIM4Q9H7M6 989 aa19.85■□□□□ 0.77
SMARCD3-212ENST00000485610 KIAA1024Q9UPX6 916 aa19.85■□□□□ 0.77
SMARCD3-212ENST00000485610 BACH1O14867 736 aa19.84■□□□□ 0.77
SMARCD3-212ENST00000485610 DKC1O60832 514 aaKnown RBP eCLIP19.84■□□□□ 0.77
SMARCD3-212ENST00000485610 DUSP11O75319 330 aaKnown RBP19.84■□□□□ 0.77
SMARCD3-212ENST00000485610 CNGA1P29973 690 aa19.84■□□□□ 0.77
SMARCD3-212ENST00000485610 TCF7P36402 384 aaPredicted RBP19.84■□□□□ 0.77
SMARCD3-212ENST00000485610 LBX1P52954 281 aa19.84■□□□□ 0.77
SMARCD3-212ENST00000485610 NAALADL2Q58DX5 795 aa19.84■□□□□ 0.77
SMARCD3-212ENST00000485610 FAM160B1Q5W0V3 765 aa19.84■□□□□ 0.77
SMARCD3-212ENST00000485610 KRBA2Q6ZNG9 492 aa19.84■□□□□ 0.77
SMARCD3-212ENST00000485610 EMSYQ7Z589 1322 aa19.84■□□□□ 0.77
SMARCD3-212ENST00000485610 TPH2Q8IWU9 490 aa19.84■□□□□ 0.77
SMARCD3-212ENST00000485610 CEP57L1Q8IYX8 460 aa19.84■□□□□ 0.77
SMARCD3-212ENST00000485610 AFG1LQ8WV93 481 aa19.84■□□□□ 0.77
SMARCD3-212ENST00000485610 LENG1Q96BZ8 264 aaPredicted RBP19.84■□□□□ 0.77
SMARCD3-212ENST00000485610 CCDC34Q96HJ3 373 aa19.84■□□□□ 0.77
SMARCD3-212ENST00000485610 MAGEF1Q9HAY2 307 aa19.84■□□□□ 0.77
SMARCD3-212ENST00000485610 GABBR1Q9UBS5 961 aa19.84■□□□□ 0.77
SMARCD3-212ENST00000485610 SERTAD1Q9UHV2 236 aa19.84■□□□□ 0.77
SMARCD3-212ENST00000485610 IGKV6D-21A0A0A0MT36 114 aa19.83■□□□□ 0.76
SMARCD3-212ENST00000485610 LYPLA2O95372 231 aa19.83■□□□□ 0.76
SMARCD3-212ENST00000485610 SLFN14P0C7P3 912 aa19.83■□□□□ 0.76
SMARCD3-212ENST00000485610 CCND3P30281 292 aaPredicted RBP19.83■□□□□ 0.76
SMARCD3-212ENST00000485610 UGCGQ16739 394 aa19.83■□□□□ 0.76
SMARCD3-212ENST00000485610 LONRF3Q496Y0 759 aa19.83■□□□□ 0.76
SMARCD3-212ENST00000485610 SWSAP1Q6NVH7 229 aa19.83■□□□□ 0.76
SMARCD3-212ENST00000485610 PDXDC2PQ6P474 469 aa19.83■□□□□ 0.76
SMARCD3-212ENST00000485610 CNNM3Q8NE01 707 aa19.83■□□□□ 0.76
SMARCD3-212ENST00000485610 AP5M1Q9H0R1 490 aa19.83■□□□□ 0.76
SMARCD3-212ENST00000485610 NUP62CLQ9H1M0 184 aa19.83■□□□□ 0.76
SMARCD3-212ENST00000485610 CLSTN2Q9H4D0 955 aa19.83■□□□□ 0.76
SMARCD3-212ENST00000485610 ZNF302Q9NR11 478 aa19.83■□□□□ 0.76
SMARCD3-212ENST00000485610 DYNC1LI2O43237 492 aaPredicted RBP19.82■□□□□ 0.76
SMARCD3-212ENST00000485610 LGR5O75473 907 aa19.82■□□□□ 0.76
SMARCD3-212ENST00000485610 MMP3P08254 477 aa19.82■□□□□ 0.76
SMARCD3-212ENST00000485610 RARBP10826 455 aa19.82■□□□□ 0.76
SMARCD3-212ENST00000485610 HOXD8P13378 290 aaPredicted RBP19.82■□□□□ 0.76
SMARCD3-212ENST00000485610 CAVIN1Q6NZI2 390 aaKnown RBP19.82■□□□□ 0.76
SMARCD3-212ENST00000485610 KCNK18Q7Z418 384 aa19.82■□□□□ 0.76
SMARCD3-212ENST00000485610 C4orf19Q8IY42 314 aa19.82■□□□□ 0.76
SMARCD3-212ENST00000485610 AFAP1L1Q8TED9 768 aa19.82■□□□□ 0.76
SMARCD3-212ENST00000485610 LRRC15Q8TF66 581 aa19.82■□□□□ 0.76
SMARCD3-212ENST00000485610 LARP4BQ92615 738 aaKnown RBP19.82■□□□□ 0.76
SMARCD3-212ENST00000485610 RAD54LQ92698 747 aa19.82■□□□□ 0.76
SMARCD3-212ENST00000485610 NACC1Q96RE7 527 aa19.82■□□□□ 0.76
SMARCD3-212ENST00000485610 AZI2Q9H6S1 392 aa19.82■□□□□ 0.76
SMARCD3-212ENST00000485610 BLOC1S4Q9NUP1 217 aa19.82■□□□□ 0.76
SMARCD3-212ENST00000485610 WRAP73Q9P2S5 460 aaPredicted RBP19.82■□□□□ 0.76
SMARCD3-212ENST00000485610 BRDTQ58F21 947 aaPredicted RBP19.81■□□□□ 0.76
SMARCD3-212ENST00000485610 CCDC183Q5T5S1 534 aa19.81■□□□□ 0.76
SMARCD3-212ENST00000485610 KANK3Q6NY19 840 aa19.81■□□□□ 0.76
SMARCD3-212ENST00000485610 PCYT2Q99447 389 aa19.81■□□□□ 0.76
SMARCD3-212ENST00000485610 UPF3AQ9H1J1 476 aaKnown RBP19.81■□□□□ 0.76
SMARCD3-212ENST00000485610 DNM3Q9UQ16 869 aa19.81■□□□□ 0.76
SMARCD3-212ENST00000485610 MAFBQ9Y5Q3 323 aaPredicted RBP19.81■□□□□ 0.76
SMARCD3-212ENST00000485610 SYNRGQ9UMZ2 1314 aa19.8■□□□□ 0.76
SMARCD3-212ENST00000485610 A6NJR5 290 aa19.8■□□□□ 0.76
SMARCD3-212ENST00000485610 MSCO60682 206 aa19.8■□□□□ 0.76
SMARCD3-212ENST00000485610 PPFIA4O75335 1185 aa19.8■□□□□ 0.76
SMARCD3-212ENST00000485610 EYA4O95677 639 aa19.8■□□□□ 0.76
SMARCD3-212ENST00000485610 CPT1AP50416 773 aa19.8■□□□□ 0.76
SMARCD3-212ENST00000485610 STAT5BP51692 787 aa19.8■□□□□ 0.76
SMARCD3-212ENST00000485610 PRKCEQ02156 737 aa19.8■□□□□ 0.76
SMARCD3-212ENST00000485610 DGKDQ16760 1214 aa19.8■□□□□ 0.76
SMARCD3-212ENST00000485610 SLC9C1Q4G0N8 1177 aa19.8■□□□□ 0.76
SMARCD3-212ENST00000485610 ELOA2Q8IYF1 753 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms