RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 JAK3P52333 1124 aa16.27■□□□□ 0.2
LRIF1-202ENST00000485275 SLC12A3P55017 1021 aa16.27■□□□□ 0.2
LRIF1-202ENST00000485275 TYRO3Q06418 890 aa16.27■□□□□ 0.2
LRIF1-202ENST00000485275 ACVR2BQ13705 512 aa16.27■□□□□ 0.2
LRIF1-202ENST00000485275 HSDL1Q3SXM5 330 aa16.27■□□□□ 0.2
LRIF1-202ENST00000485275 CELF3Q5SZQ8 465 aaKnown RBP16.27■□□□□ 0.2
LRIF1-202ENST00000485275 NT5DC1Q5TFE4 455 aa16.27■□□□□ 0.2
LRIF1-202ENST00000485275 OLFML2BQ68BL8 750 aa16.27■□□□□ 0.2
LRIF1-202ENST00000485275 METTL7BQ6UX53 244 aa16.27■□□□□ 0.2
LRIF1-202ENST00000485275 SMAP1Q8IYB5 467 aaPredicted RBP16.27■□□□□ 0.2
LRIF1-202ENST00000485275 MSL3Q8N5Y2 521 aaKnown RBP16.27■□□□□ 0.2
LRIF1-202ENST00000485275 TRIB2Q92519 343 aa16.27■□□□□ 0.2
LRIF1-202ENST00000485275 LOXHD1Q8IVV2 1947 aa16.27■□□□□ 0.19
LRIF1-202ENST00000485275 GSTTP1A0A1W2PQM5 241 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 MYMKA6NI61 221 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 GTPBP6O43824 516 aaPredicted RBP16.26■□□□□ 0.19
LRIF1-202ENST00000485275 ZNF862O60290 1169 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 LETM1O95202 739 aaPredicted RBP16.26■□□□□ 0.19
LRIF1-202ENST00000485275 ATG7O95352 703 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 P4HBP07237 508 aaKnown RBP16.26■□□□□ 0.19
LRIF1-202ENST00000485275 ZNF865P0CJ78 1059 aaPredicted RBP16.26■□□□□ 0.19
LRIF1-202ENST00000485275 ARHGAP1Q07960 439 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 NEDD9Q14511 834 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 TTLL4Q14679 1199 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 ISM2Q6H9L7 571 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 KANK3Q6NY19 840 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 PCYT2Q99447 389 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 TRIM9Q9C026 710 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 ABHD16BQ9H3Z7 469 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 SLC5A4Q9NY91 659 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 MAN1B1Q9UKM7 699 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 ZHX1Q9UKY1 873 aaPredicted RBP16.26■□□□□ 0.19
LRIF1-202ENST00000485275 PCDHA10Q9Y5I2 948 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 IGSF9BQ9UPX0 1349 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 KLRC4O43908 158 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 STBD1O95210 358 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 SUPT20HL2P0C7V6 817 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 PLA2G4BP0C869 781 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 SMPD1P17405 629 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 CCDC144BQ3MJ40 725 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 RDM1Q8NG50 284 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 NEK9Q8TD19 979 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 LENG1Q96BZ8 264 aaPredicted RBP16.26■□□□□ 0.19
LRIF1-202ENST00000485275 MAGEF1Q9HAY2 307 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 SAGE1Q9NXZ1 904 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 STK24Q9Y6E0 443 aa16.26■□□□□ 0.19
LRIF1-202ENST00000485275 MYH9P35579 1960 aaKnown RBP16.25■□□□□ 0.19
LRIF1-202ENST00000485275 IGKV6D-21A0A0A0MT36 114 aa16.25■□□□□ 0.19
LRIF1-202ENST00000485275 QARSP47897 775 aaKnown RBP16.25■□□□□ 0.19
LRIF1-202ENST00000485275 TRIM32Q13049 653 aa16.25■□□□□ 0.19
LRIF1-202ENST00000485275 DPCR1Q3MIW9 517 aa16.25■□□□□ 0.19
LRIF1-202ENST00000485275 ARSHQ5FYA8 562 aa16.25■□□□□ 0.19
LRIF1-202ENST00000485275 KCNV1Q6PIU1 500 aa16.25■□□□□ 0.19
LRIF1-202ENST00000485275 C11orf57Q6ZUT1 292 aaPredicted RBP16.25■□□□□ 0.19
LRIF1-202ENST00000485275 TRPV1Q8NER1 839 aa16.25■□□□□ 0.19
LRIF1-202ENST00000485275 ZNF296Q8WUU4 475 aaPredicted RBP16.25■□□□□ 0.19
LRIF1-202ENST00000485275 GPR20Q99678 358 aa16.25■□□□□ 0.19
LRIF1-202ENST00000485275 BHMT2Q9H2M3 363 aa16.25■□□□□ 0.19
LRIF1-202ENST00000485275 GABBR1Q9UBS5 961 aa16.25■□□□□ 0.19
LRIF1-202ENST00000485275 NPHP3-ACAD11A0A0J9YXS1 232 aa16.24■□□□□ 0.19
LRIF1-202ENST00000485275 XRCC5P13010 732 aaKnown RBP16.24■□□□□ 0.19
LRIF1-202ENST00000485275 CYP11B2P19099 503 aa16.24■□□□□ 0.19
LRIF1-202ENST00000485275 ATP4AP20648 1035 aa16.24■□□□□ 0.19
LRIF1-202ENST00000485275 SWSAP1Q6NVH7 229 aa16.24■□□□□ 0.19
LRIF1-202ENST00000485275 SV2BQ7L1I2 683 aa16.24■□□□□ 0.19
LRIF1-202ENST00000485275 GIMAP8Q8ND71 665 aaPredicted RBP16.24■□□□□ 0.19
LRIF1-202ENST00000485275 C7orf25Q9BPX7 421 aa16.24■□□□□ 0.19
LRIF1-202ENST00000485275 SH2D3AQ9BRG2 576 aa16.24■□□□□ 0.19
LRIF1-202ENST00000485275 RUSC1Q9BVN2 902 aa16.24■□□□□ 0.19
LRIF1-202ENST00000485275 ZSWIM4Q9H7M6 989 aa16.24■□□□□ 0.19
LRIF1-202ENST00000485275 LYPLA2O95372 231 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 EYA4O95677 639 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 MUTP22033 750 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 TCF7P36402 384 aaPredicted RBP16.23■□□□□ 0.19
LRIF1-202ENST00000485275 PSMC5P62195 406 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 CACNB1Q02641 598 aaPredicted RBP16.23■□□□□ 0.19
LRIF1-202ENST00000485275 DYMQ7RTS9 669 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 TRIM50Q86XT4 487 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 SYT2Q8N9I0 419 aaPredicted RBP16.23■□□□□ 0.19
LRIF1-202ENST00000485275 DDX12PQ92771 950 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 SMARCE1Q969G3 411 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 DNAJC19Q96DA6 116 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 MLXIPQ9HAP2 919 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 TCEAL9Q9UHQ7 104 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 DNM3Q9UQ16 869 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 SSBP05455 408 aaKnown RBP eCLIP16.23■□□□□ 0.19
LRIF1-202ENST00000485275 PSAPP07602 524 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 CCDC192P0DO97 292 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 IRX5P78411 483 aaPredicted RBP16.23■□□□□ 0.19
LRIF1-202ENST00000485275 MORC3Q14149 939 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 DUSP28Q4G0W2 176 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 UTP14CQ5TAP6 766 aaKnown RBP16.23■□□□□ 0.19
LRIF1-202ENST00000485275 PLA2G4FQ68DD2 849 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 MIS18BP1Q6P0N0 1132 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 ANO5Q75V66 913 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 TRMT1LQ7Z2T5 733 aaKnown RBP16.23■□□□□ 0.19
LRIF1-202ENST00000485275 GPBP1Q86WP2 473 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 DHX37Q8IY37 1157 aaKnown RBP16.23■□□□□ 0.19
LRIF1-202ENST00000485275 C4orf19Q8IY42 314 aa16.23■□□□□ 0.19
LRIF1-202ENST00000485275 SPATA33Q96N06 139 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms