RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 BADQ92934 168 aa17.96■□□□□ 0.47
UPF3A-208ENST00000484246 PCDHA10Q9Y5I2 948 aa17.96■□□□□ 0.47
UPF3A-208ENST00000484246 IGSF9BQ9UPX0 1349 aa17.96■□□□□ 0.46
UPF3A-208ENST00000484246 C17orf102A2RUQ5 167 aa17.95■□□□□ 0.46
UPF3A-208ENST00000484246 DDX39AO00148 427 aaKnown RBP17.95■□□□□ 0.46
UPF3A-208ENST00000484246 GNAT1P11488 350 aa17.95■□□□□ 0.46
UPF3A-208ENST00000484246 CYP2C9P11712 490 aa17.95■□□□□ 0.46
UPF3A-208ENST00000484246 STAT5BP51692 787 aa17.95■□□□□ 0.46
UPF3A-208ENST00000484246 MDM2Q00987 491 aaPredicted RBP17.95■□□□□ 0.46
UPF3A-208ENST00000484246 PPP2R5CQ13362 524 aa17.95■□□□□ 0.46
UPF3A-208ENST00000484246 BFSP2Q13515 415 aa17.95■□□□□ 0.46
UPF3A-208ENST00000484246 FAM160B1Q5W0V3 765 aa17.95■□□□□ 0.46
UPF3A-208ENST00000484246 CCDC155Q8N6L0 562 aa17.95■□□□□ 0.46
UPF3A-208ENST00000484246 PPP1R13LQ8WUF5 828 aa17.95■□□□□ 0.46
UPF3A-208ENST00000484246 LMBR1Q8WVP7 490 aa17.95■□□□□ 0.46
UPF3A-208ENST00000484246 DHX38Q92620 1227 aaKnown RBP17.95■□□□□ 0.46
UPF3A-208ENST00000484246 HAS1Q92839 578 aa17.95■□□□□ 0.46
UPF3A-208ENST00000484246 TNPO1Q92973 898 aaKnown RBP17.95■□□□□ 0.46
UPF3A-208ENST00000484246 RNPEPQ9H4A4 650 aa17.95■□□□□ 0.46
UPF3A-208ENST00000484246 VAV3Q9UKW4 847 aa17.95■□□□□ 0.46
UPF3A-208ENST00000484246 COLQQ9Y215 455 aaPredicted RBP17.95■□□□□ 0.46
UPF3A-208ENST00000484246 NOD1Q9Y239 953 aa17.95■□□□□ 0.46
UPF3A-208ENST00000484246 MAFBQ9Y5Q3 323 aaPredicted RBP17.95■□□□□ 0.46
UPF3A-208ENST00000484246 DNAH12Q6ZR08 3092 aa17.95■□□□□ 0.46
UPF3A-208ENST00000484246 MBLAC1A4D2B0 266 aaPredicted RBP17.94■□□□□ 0.46
UPF3A-208ENST00000484246 KIF28PB7ZC32 967 aa17.94■□□□□ 0.46
UPF3A-208ENST00000484246 CAND2O75155 1236 aa17.94■□□□□ 0.46
UPF3A-208ENST00000484246 PSAPP07602 524 aa17.94■□□□□ 0.46
UPF3A-208ENST00000484246 CHMP4BP1P59074 171 aa17.94■□□□□ 0.46
UPF3A-208ENST00000484246 PPFIA1Q13136 1202 aa17.94■□□□□ 0.46
UPF3A-208ENST00000484246 TRIM71Q2Q1W2 868 aaKnown RBP17.94■□□□□ 0.46
UPF3A-208ENST00000484246 SLFN12Q8IYM2 578 aa17.94■□□□□ 0.46
UPF3A-208ENST00000484246 ATP8B4Q8TF62 1192 aa17.94■□□□□ 0.46
UPF3A-208ENST00000484246 WNT8AQ9H1J5 351 aa17.94■□□□□ 0.46
UPF3A-208ENST00000484246 UNC45AQ9H3U1 944 aa17.94■□□□□ 0.46
UPF3A-208ENST00000484246 DISC1Q9NRI5 854 aa17.94■□□□□ 0.46
UPF3A-208ENST00000484246 WNT7AO00755 349 aa17.93■□□□□ 0.46
UPF3A-208ENST00000484246 NEMFO60524 1076 aa17.93■□□□□ 0.46
UPF3A-208ENST00000484246 CYP2C18P33260 490 aa17.93■□□□□ 0.46
UPF3A-208ENST00000484246 FPGSQ05932 587 aa17.93■□□□□ 0.46
UPF3A-208ENST00000484246 PPIGQ13427 754 aaKnown RBP eCLIP17.93■□□□□ 0.46
UPF3A-208ENST00000484246 PLCB4Q15147 1175 aa17.93■□□□□ 0.46
UPF3A-208ENST00000484246 HABP4Q5JVS0 413 aaKnown RBP17.93■□□□□ 0.46
UPF3A-208ENST00000484246 RPAINQ86UA6 219 aa17.93■□□□□ 0.46
UPF3A-208ENST00000484246 TMEM199Q8N511 208 aa17.93■□□□□ 0.46
UPF3A-208ENST00000484246 PPP1R12CQ9BZL4 782 aa17.93■□□□□ 0.46
UPF3A-208ENST00000484246 UBE2OQ9C0C9 1292 aaKnown RBP17.93■□□□□ 0.46
UPF3A-208ENST00000484246 ZNF302Q9NR11 478 aa17.93■□□□□ 0.46
UPF3A-208ENST00000484246 CEP290O15078 2479 aa17.93■□□□□ 0.46
UPF3A-208ENST00000484246 UMODL1Q5DID0 1318 aa17.93■□□□□ 0.46
UPF3A-208ENST00000484246 COL1A2P08123 1366 aa17.92■□□□□ 0.46
UPF3A-208ENST00000484246 RRN3P2A6NIE6 340 aa17.92■□□□□ 0.46
UPF3A-208ENST00000484246 BACH1O14867 736 aa17.92■□□□□ 0.46
UPF3A-208ENST00000484246 HBP1O60381 514 aa17.92■□□□□ 0.46
UPF3A-208ENST00000484246 PARNO95453 639 aaKnown RBP17.92■□□□□ 0.46
UPF3A-208ENST00000484246 RPLP2P05387 115 aaKnown RBP17.92■□□□□ 0.46
UPF3A-208ENST00000484246 MARK3P27448 753 aa17.92■□□□□ 0.46
UPF3A-208ENST00000484246 RFC2P35250 354 aa17.92■□□□□ 0.46
UPF3A-208ENST00000484246 SPIRE1Q08AE8 756 aa17.92■□□□□ 0.46
UPF3A-208ENST00000484246 GRIK4Q16099 956 aa17.92■□□□□ 0.46
UPF3A-208ENST00000484246 TAF2Q6P1X5 1199 aa17.92■□□□□ 0.46
UPF3A-208ENST00000484246 PDXDC2PQ6P474 469 aa17.92■□□□□ 0.46
UPF3A-208ENST00000484246 ATP6V0A1Q93050 837 aa17.92■□□□□ 0.46
UPF3A-208ENST00000484246 FAM167AQ96KS9 214 aa17.92■□□□□ 0.46
UPF3A-208ENST00000484246 MTMR9Q96QG7 549 aa17.92■□□□□ 0.46
UPF3A-208ENST00000484246 UIMC1Q96RL1 719 aa17.92■□□□□ 0.46
UPF3A-208ENST00000484246 SETD4Q9NVD3 440 aa17.92■□□□□ 0.46
UPF3A-208ENST00000484246 POTEB3A0JP26 581 aa17.91■□□□□ 0.46
UPF3A-208ENST00000484246 PFKMP08237 780 aa17.91■□□□□ 0.46
UPF3A-208ENST00000484246 ATP4AP20648 1035 aa17.91■□□□□ 0.46
UPF3A-208ENST00000484246 PDCP20941 246 aa17.91■□□□□ 0.46
UPF3A-208ENST00000484246 ZNF200P98182 395 aaPredicted RBP17.91■□□□□ 0.46
UPF3A-208ENST00000484246 GNL2Q13823 731 aaKnown RBP17.91■□□□□ 0.46
UPF3A-208ENST00000484246 SWSAP1Q6NVH7 229 aa17.91■□□□□ 0.46
UPF3A-208ENST00000484246 TRAF7Q6Q0C0 670 aa17.91■□□□□ 0.46
UPF3A-208ENST00000484246 POTEBQ6S5H4 581 aa17.91■□□□□ 0.46
UPF3A-208ENST00000484246 TDHQ8IZJ6 230 aa17.91■□□□□ 0.46
UPF3A-208ENST00000484246 BBXQ8WY36 941 aaPredicted RBP17.91■□□□□ 0.46
UPF3A-208ENST00000484246 WNT8BQ93098 351 aa17.91■□□□□ 0.46
UPF3A-208ENST00000484246 GJA10Q969M2 543 aa17.91■□□□□ 0.46
UPF3A-208ENST00000484246 NOL7Q9UMY1 257 aaKnown RBP17.91■□□□□ 0.46
UPF3A-208ENST00000484246 DOCK5Q9H7D0 1870 aa17.9■□□□□ 0.46
UPF3A-208ENST00000484246 H3BQV1 296 aa17.9■□□□□ 0.46
UPF3A-208ENST00000484246 TREHO43280 583 aa17.9■□□□□ 0.46
UPF3A-208ENST00000484246 BAG4O95429 457 aaKnown RBP17.9■□□□□ 0.46
UPF3A-208ENST00000484246 IQCF3P0C7M6 154 aa17.9■□□□□ 0.46
UPF3A-208ENST00000484246 CKBP12277 381 aa17.9■□□□□ 0.46
UPF3A-208ENST00000484246 INSRRP14616 1297 aa17.9■□□□□ 0.46
UPF3A-208ENST00000484246 CSF2RAP15509 400 aa17.9■□□□□ 0.46
UPF3A-208ENST00000484246 SELPP16109 830 aa17.9■□□□□ 0.46
UPF3A-208ENST00000484246 EPHB4P54760 987 aa17.9■□□□□ 0.46
UPF3A-208ENST00000484246 CALCRLQ16602 461 aa17.9■□□□□ 0.46
UPF3A-208ENST00000484246 TTC38Q5R3I4 469 aa17.9■□□□□ 0.46
UPF3A-208ENST00000484246 MARCH8Q5T0T0 291 aa17.9■□□□□ 0.46
UPF3A-208ENST00000484246 LARP1BQ659C4 914 aaKnown RBP17.9■□□□□ 0.46
UPF3A-208ENST00000484246 PSRC1Q6PGN9 363 aaPredicted RBP17.9■□□□□ 0.46
UPF3A-208ENST00000484246 MIER3Q7Z3K6 550 aa17.9■□□□□ 0.46
UPF3A-208ENST00000484246 HSCBQ8IWL3 235 aa17.9■□□□□ 0.46
UPF3A-208ENST00000484246 RETREG2Q8NC44 543 aa17.9■□□□□ 0.46
UPF3A-208ENST00000484246 VWCEQ96DN2 955 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms