RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 KATNBL1Q9H079 304 aa5.67□□□□□ -1.5
NSMCE4A-210ENST00000483541 SEC61A2Q9H9S3 476 aa5.67□□□□□ -1.5
NSMCE4A-210ENST00000483541 SRPK3Q9UPE1 567 aa5.67□□□□□ -1.5
NSMCE4A-210ENST00000483541 CCDC85CA6NKD9 419 aa5.66□□□□□ -1.5
NSMCE4A-210ENST00000483541 H0Y858 1186 aa5.66□□□□□ -1.5
NSMCE4A-210ENST00000483541 DIAPH1O60610 1272 aaKnown RBP5.66□□□□□ -1.5
NSMCE4A-210ENST00000483541 PTPN1P18031 435 aaKnown RBP5.66□□□□□ -1.5
NSMCE4A-210ENST00000483541 GTF2F1P35269 517 aaKnown RBP eCLIP5.66□□□□□ -1.5
NSMCE4A-210ENST00000483541 GLRBP48167 497 aa5.66□□□□□ -1.5
NSMCE4A-210ENST00000483541 PUM1Q14671 1186 aaKnown RBP eCLIP5.66□□□□□ -1.5
NSMCE4A-210ENST00000483541 FAM47CQ5HY64 1035 aa5.66□□□□□ -1.5
NSMCE4A-210ENST00000483541 FIGNQ5HY92 759 aa5.66□□□□□ -1.5
NSMCE4A-210ENST00000483541 BTBD8Q5XKL5 378 aa5.66□□□□□ -1.5
NSMCE4A-210ENST00000483541 DPP8Q6V1X1 898 aaPredicted RBP5.66□□□□□ -1.5
NSMCE4A-210ENST00000483541 STPG3Q8N7X2 389 aa5.66□□□□□ -1.5
NSMCE4A-210ENST00000483541 CD244Q9BZW8 370 aa5.66□□□□□ -1.5
NSMCE4A-210ENST00000483541 JADE2Q9NQC1 790 aa5.66□□□□□ -1.5
NSMCE4A-210ENST00000483541 CATSPERZQ9NTU4 200 aa5.66□□□□□ -1.5
NSMCE4A-210ENST00000483541 PCDHA8Q9Y5H6 950 aa5.66□□□□□ -1.5
NSMCE4A-210ENST00000483541 FAM90A27PA6NNH2 459 aa5.65□□□□□ -1.5
NSMCE4A-210ENST00000483541 GPR42O15529 346 aa5.65□□□□□ -1.5
NSMCE4A-210ENST00000483541 IL18BPO95998 194 aa5.65□□□□□ -1.5
NSMCE4A-210ENST00000483541 PDE6AP16499 860 aa5.65□□□□□ -1.5
NSMCE4A-210ENST00000483541 ST5P78524 1137 aa5.65□□□□□ -1.5
NSMCE4A-210ENST00000483541 CRY1Q16526 586 aa5.65□□□□□ -1.5
NSMCE4A-210ENST00000483541 PHF19Q5T6S3 580 aa5.65□□□□□ -1.5
NSMCE4A-210ENST00000483541 EP400NLQ6ZTU2 488 aa5.65□□□□□ -1.5
NSMCE4A-210ENST00000483541 RALYLQ86SE5 291 aaKnown RBP5.65□□□□□ -1.5
NSMCE4A-210ENST00000483541 OSTM1Q86WC4 334 aa5.65□□□□□ -1.5
NSMCE4A-210ENST00000483541 KISS1RQ969F8 398 aaPredicted RBP5.65□□□□□ -1.5
NSMCE4A-210ENST00000483541 MKL1Q969V6 931 aa5.65□□□□□ -1.5
NSMCE4A-210ENST00000483541 EXOC2Q96KP1 924 aa5.65□□□□□ -1.5
NSMCE4A-210ENST00000483541 CD248Q9HCU0 757 aa5.65□□□□□ -1.5
NSMCE4A-210ENST00000483541 MRPS23Q9Y3D9 190 aaKnown RBP5.65□□□□□ -1.5
NSMCE4A-210ENST00000483541 ATP23Q9Y6H3 246 aa5.65□□□□□ -1.5
NSMCE4A-210ENST00000483541 SLC4A7Q9Y6M7 1214 aa5.65□□□□□ -1.5
NSMCE4A-210ENST00000483541 KDM2BQ8NHM5 1336 aa5.65□□□□□ -1.51
NSMCE4A-210ENST00000483541 CCDC163A0A0D9SF12 145 aa5.64□□□□□ -1.51
NSMCE4A-210ENST00000483541 MAN2B1O00754 1011 aa5.64□□□□□ -1.51
NSMCE4A-210ENST00000483541 CUTAO60888 179 aa5.64□□□□□ -1.51
NSMCE4A-210ENST00000483541 EFCAB14O75071 495 aa5.64□□□□□ -1.51
NSMCE4A-210ENST00000483541 AMY2AP04746 511 aa5.64□□□□□ -1.51
NSMCE4A-210ENST00000483541 APPP05067 770 aa5.64□□□□□ -1.51
NSMCE4A-210ENST00000483541 AMY2BP19961 511 aa5.64□□□□□ -1.51
NSMCE4A-210ENST00000483541 HERVK_113P62684 666 aa5.64□□□□□ -1.51
NSMCE4A-210ENST00000483541 LACTBP83111 547 aaPredicted RBP5.64□□□□□ -1.51
NSMCE4A-210ENST00000483541 RASA3Q14644 834 aa5.64□□□□□ -1.51
NSMCE4A-210ENST00000483541 DEPDC7Q96QD5 511 aa5.64□□□□□ -1.51
NSMCE4A-210ENST00000483541 CDK5RAP1Q96SZ6 601 aaKnown RBP5.64□□□□□ -1.51
NSMCE4A-210ENST00000483541 RIC8BQ9NVN3 520 aa5.64□□□□□ -1.51
NSMCE4A-210ENST00000483541 TSC22D4Q9Y3Q8 395 aa5.64□□□□□ -1.51
NSMCE4A-210ENST00000483541 PATE3B3GLJ2 98 aa5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 ZNF561-AS1K7EIQ3 104 aa5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 CLASP2O75122 1294 aaKnown RBP5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 CNOT4O95628 575 aaKnown RBP5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 CRTAMO95727 393 aa5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 PYGMP11217 842 aa5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 TNFRSF1AP19438 455 aa5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 POLD1P28340 1107 aa5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 CSF2RBP32927 897 aa5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 ICAM4Q14773 271 aa5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 CXXC5Q7LFL8 322 aaKnown RBP5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 PTRH1Q86Y79 214 aaKnown RBP5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 ZC3H7AQ8IWR0 971 aaKnown RBP5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 JMYQ8N9B5 988 aa5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 TACO1Q9BSH4 297 aaKnown RBP5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 CARD11Q9BXL7 1154 aa5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 SEMA4AQ9H3S1 761 aa5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 SLC39A2Q9NP94 309 aa5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 ARHGAP28Q9P2N2 729 aa5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 ST6GALNAC2Q9UJ37 374 aa5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 CBLCQ9ULV8 474 aa5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 PCDHA9Q9Y5H5 950 aa5.63□□□□□ -1.51
NSMCE4A-210ENST00000483541 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.62□□□□□ -1.51
NSMCE4A-210ENST00000483541 SRGAP2CP0DJJ0 459 aa5.62□□□□□ -1.51
NSMCE4A-210ENST00000483541 JAM2P57087 298 aa5.62□□□□□ -1.51
NSMCE4A-210ENST00000483541 USP10Q14694 798 aaKnown RBP5.62□□□□□ -1.51
NSMCE4A-210ENST00000483541 SF3A1Q15459 793 aaKnown RBP5.62□□□□□ -1.51
NSMCE4A-210ENST00000483541 IFNL2Q8IZJ0 200 aa5.62□□□□□ -1.51
NSMCE4A-210ENST00000483541 GSTCDQ8NEC7 633 aa5.62□□□□□ -1.51
NSMCE4A-210ENST00000483541 KLC2Q9H0B6 622 aa5.62□□□□□ -1.51
NSMCE4A-210ENST00000483541 MEGF9Q9H1U4 602 aa5.62□□□□□ -1.51
NSMCE4A-210ENST00000483541 SNTG2Q9NY99 539 aa5.62□□□□□ -1.51
NSMCE4A-210ENST00000483541 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.61□□□□□ -1.51
NSMCE4A-210ENST00000483541 CCDC66A2RUB6 948 aa5.61□□□□□ -1.51
NSMCE4A-210ENST00000483541 FAM221BA6H8Z2 402 aa5.61□□□□□ -1.51
NSMCE4A-210ENST00000483541 KCNQ2O43526 872 aa5.61□□□□□ -1.51
NSMCE4A-210ENST00000483541 PTGS1P23219 599 aa5.61□□□□□ -1.51
NSMCE4A-210ENST00000483541 KRTAP1-1Q07627 177 aa5.61□□□□□ -1.51
NSMCE4A-210ENST00000483541 TOP3AQ13472 1001 aaPredicted RBP5.61□□□□□ -1.51
NSMCE4A-210ENST00000483541 TRIM61Q5EBN2 209 aa5.61□□□□□ -1.51
NSMCE4A-210ENST00000483541 MAGEB10Q96LZ2 347 aaPredicted RBP5.61□□□□□ -1.51
NSMCE4A-210ENST00000483541 PTPN18Q99952 460 aa5.61□□□□□ -1.51
NSMCE4A-210ENST00000483541 DEF6Q9H4E7 631 aa5.61□□□□□ -1.51
NSMCE4A-210ENST00000483541 SMURF1Q9HCE7 757 aa5.61□□□□□ -1.51
NSMCE4A-210ENST00000483541 GALNT8Q9NY28 637 aa5.61□□□□□ -1.51
NSMCE4A-210ENST00000483541 FBXO10Q9UK96 956 aa5.61□□□□□ -1.51
NSMCE4A-210ENST00000483541 TESMINQ9Y4I5 508 aa5.61□□□□□ -1.51
NSMCE4A-210ENST00000483541 MATN3O15232 486 aa5.6□□□□□ -1.51
NSMCE4A-210ENST00000483541 ZNF623O75123 536 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms