RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 STAT5BP51692 787 aa20.38■□□□□ 0.85
HDAC6-225ENST00000483506 TMEM240Q5SV17 173 aa20.38■□□□□ 0.85
HDAC6-225ENST00000483506 RASIP1Q5U651 963 aa20.38■□□□□ 0.85
HDAC6-225ENST00000483506 MIS18BP1Q6P0N0 1132 aa20.38■□□□□ 0.85
HDAC6-225ENST00000483506 RETREG2Q8NC44 543 aa20.38■□□□□ 0.85
HDAC6-225ENST00000483506 ATP6V0A1Q93050 837 aa20.38■□□□□ 0.85
HDAC6-225ENST00000483506 WNT8BQ93098 351 aa20.38■□□□□ 0.85
HDAC6-225ENST00000483506 SCLYQ96I15 445 aa20.38■□□□□ 0.85
HDAC6-225ENST00000483506 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.38■□□□□ 0.85
HDAC6-225ENST00000483506 SETD4Q9NVD3 440 aa20.38■□□□□ 0.85
HDAC6-225ENST00000483506 DDX25Q9UHL0 483 aaKnown RBP20.38■□□□□ 0.85
HDAC6-225ENST00000483506 MBLAC1A4D2B0 266 aaPredicted RBP20.37■□□□□ 0.85
HDAC6-225ENST00000483506 SOX1O00570 391 aaPredicted RBP20.37■□□□□ 0.85
HDAC6-225ENST00000483506 TREHO43280 583 aa20.37■□□□□ 0.85
HDAC6-225ENST00000483506 SLC37A4O43826 429 aa20.37■□□□□ 0.85
HDAC6-225ENST00000483506 CAND2O75155 1236 aa20.37■□□□□ 0.85
HDAC6-225ENST00000483506 PSMD10O75832 226 aa20.37■□□□□ 0.85
HDAC6-225ENST00000483506 PARNO95453 639 aaKnown RBP20.37■□□□□ 0.85
HDAC6-225ENST00000483506 CKBP12277 381 aa20.37■□□□□ 0.85
HDAC6-225ENST00000483506 SELPP16109 830 aa20.37■□□□□ 0.85
HDAC6-225ENST00000483506 PPFIA1Q13136 1202 aa20.37■□□□□ 0.85
HDAC6-225ENST00000483506 LETM2Q2VYF4 491 aa20.37■□□□□ 0.85
HDAC6-225ENST00000483506 TRAF7Q6Q0C0 670 aa20.37■□□□□ 0.85
HDAC6-225ENST00000483506 B3GNT9Q6UX72 402 aa20.37■□□□□ 0.85
HDAC6-225ENST00000483506 CCDC60Q8IWA6 550 aaPredicted RBP20.37■□□□□ 0.85
HDAC6-225ENST00000483506 RPUSD2Q8IZ73 545 aaKnown RBP20.37■□□□□ 0.85
HDAC6-225ENST00000483506 FBXO18Q8NFZ0 1043 aa20.37■□□□□ 0.85
HDAC6-225ENST00000483506 C8orf76Q96K31 380 aa20.37■□□□□ 0.85
HDAC6-225ENST00000483506 KCNMB3Q9NPA1 279 aa20.37■□□□□ 0.85
HDAC6-225ENST00000483506 MYH9P35579 1960 aaKnown RBP20.36■□□□□ 0.85
HDAC6-225ENST00000483506 FAM205CA6NFA0 338 aa20.36■□□□□ 0.85
HDAC6-225ENST00000483506 WDR64B1ANS9 1081 aa20.36■□□□□ 0.85
HDAC6-225ENST00000483506 GAS7O60861 476 aa20.36■□□□□ 0.85
HDAC6-225ENST00000483506 MARK3P27448 753 aa20.36■□□□□ 0.85
HDAC6-225ENST00000483506 PLCB4Q15147 1175 aa20.36■□□□□ 0.85
HDAC6-225ENST00000483506 LRCH2Q5VUJ6 765 aa20.36■□□□□ 0.85
HDAC6-225ENST00000483506 FAM160B1Q5W0V3 765 aa20.36■□□□□ 0.85
HDAC6-225ENST00000483506 TNPO1Q92973 898 aaKnown RBP20.36■□□□□ 0.85
HDAC6-225ENST00000483506 RNPC3Q96LT9 517 aaKnown RBP20.36■□□□□ 0.85
HDAC6-225ENST00000483506 UIMC1Q96RL1 719 aa20.36■□□□□ 0.85
HDAC6-225ENST00000483506 TEKT3Q9BXF9 490 aa20.36■□□□□ 0.85
HDAC6-225ENST00000483506 TCEAL9Q9UHQ7 104 aa20.36■□□□□ 0.85
HDAC6-225ENST00000483506 PCDHA10Q9Y5I2 948 aa20.36■□□□□ 0.85
HDAC6-225ENST00000483506 MAFBQ9Y5Q3 323 aaPredicted RBP20.36■□□□□ 0.85
HDAC6-225ENST00000483506 IGSF9BQ9UPX0 1349 aa20.35■□□□□ 0.85
HDAC6-225ENST00000483506 TBX3O15119 743 aa20.35■□□□□ 0.85
HDAC6-225ENST00000483506 PSAPP07602 524 aa20.35■□□□□ 0.85
HDAC6-225ENST00000483506 ACRP10323 421 aa20.35■□□□□ 0.85
HDAC6-225ENST00000483506 SFNP31947 248 aa20.35■□□□□ 0.85
HDAC6-225ENST00000483506 FOSBP53539 338 aa20.35■□□□□ 0.85
HDAC6-225ENST00000483506 GPNMBQ14956 572 aa20.35■□□□□ 0.85
HDAC6-225ENST00000483506 SAFBQ15424 915 aaKnown RBP eCLIP20.35■□□□□ 0.85
HDAC6-225ENST00000483506 GRIK4Q16099 956 aa20.35■□□□□ 0.85
HDAC6-225ENST00000483506 MARCH8Q5T0T0 291 aa20.35■□□□□ 0.85
HDAC6-225ENST00000483506 GPR153Q6NV75 609 aa20.35■□□□□ 0.85
HDAC6-225ENST00000483506 ZNF365Q70YC5 407 aa20.35■□□□□ 0.85
HDAC6-225ENST00000483506 LRRC8DQ7L1W4 858 aa20.35■□□□□ 0.85
HDAC6-225ENST00000483506 RPAINQ86UA6 219 aa20.35■□□□□ 0.85
HDAC6-225ENST00000483506 RDM1Q8NG50 284 aa20.35■□□□□ 0.85
HDAC6-225ENST00000483506 HERVK_113Q902F9 699 aa20.35■□□□□ 0.85
HDAC6-225ENST00000483506 FAM20AQ96MK3 541 aa20.35■□□□□ 0.85
HDAC6-225ENST00000483506 ZNF302Q9NR11 478 aa20.35■□□□□ 0.85
HDAC6-225ENST00000483506 RRN3P2A6NIE6 340 aa20.34■□□□□ 0.85
HDAC6-225ENST00000483506 BACH1O14867 736 aa20.34■□□□□ 0.85
HDAC6-225ENST00000483506 CCNT1O60563 726 aaKnown RBP20.34■□□□□ 0.85
HDAC6-225ENST00000483506 CXCL10P02778 98 aa20.34■□□□□ 0.85
HDAC6-225ENST00000483506 INSRRP14616 1297 aa20.34■□□□□ 0.85
HDAC6-225ENST00000483506 JAK3P52333 1124 aa20.34■□□□□ 0.85
HDAC6-225ENST00000483506 SWSAP1Q6NVH7 229 aa20.34■□□□□ 0.85
HDAC6-225ENST00000483506 TAF2Q6P1X5 1199 aa20.34■□□□□ 0.85
HDAC6-225ENST00000483506 FAM184AQ8NB25 1140 aa20.34■□□□□ 0.85
HDAC6-225ENST00000483506 TET1Q8NFU7 2136 aa20.34■□□□□ 0.85
HDAC6-225ENST00000483506 ATP8B4Q8TF62 1192 aa20.34■□□□□ 0.85
HDAC6-225ENST00000483506 FOXP1Q9H334 677 aaPredicted RBP20.34■□□□□ 0.85
HDAC6-225ENST00000483506 UNC45AQ9H3U1 944 aa20.34■□□□□ 0.85
HDAC6-225ENST00000483506 DISC1Q9NRI5 854 aa20.34■□□□□ 0.85
HDAC6-225ENST00000483506 POTEB3A0JP26 581 aa20.33■□□□□ 0.85
HDAC6-225ENST00000483506 FGBP02675 491 aa20.33■□□□□ 0.85
HDAC6-225ENST00000483506 ATP4AP20648 1035 aa20.33■□□□□ 0.85
HDAC6-225ENST00000483506 ZNF618Q5T7W0 954 aa20.33■□□□□ 0.85
HDAC6-225ENST00000483506 PDXDC2PQ6P474 469 aa20.33■□□□□ 0.85
HDAC6-225ENST00000483506 POTEBQ6S5H4 581 aa20.33■□□□□ 0.85
HDAC6-225ENST00000483506 GJA10Q969M2 543 aa20.33■□□□□ 0.85
HDAC6-225ENST00000483506 TUBE1Q9UJT0 475 aa20.33■□□□□ 0.85
HDAC6-225ENST00000483506 TRPC6Q9Y210 931 aa20.33■□□□□ 0.85
HDAC6-225ENST00000483506 KIF3AQ9Y496 699 aa20.33■□□□□ 0.85
HDAC6-225ENST00000483506 COL1A2P08123 1366 aa20.33■□□□□ 0.84
HDAC6-225ENST00000483506 HBP1O60381 514 aa20.32■□□□□ 0.84
HDAC6-225ENST00000483506 RPLP2P05387 115 aaKnown RBP20.32■□□□□ 0.84
HDAC6-225ENST00000483506 GUCY1B3Q02153 619 aa20.32■□□□□ 0.84
HDAC6-225ENST00000483506 PPP2R5CQ13362 524 aa20.32■□□□□ 0.84
HDAC6-225ENST00000483506 MBTPS1Q14703 1052 aa20.32■□□□□ 0.84
HDAC6-225ENST00000483506 HAS1Q92839 578 aa20.32■□□□□ 0.84
HDAC6-225ENST00000483506 LRCH3Q96II8 777 aa20.32■□□□□ 0.84
HDAC6-225ENST00000483506 VAV3Q9UKW4 847 aa20.32■□□□□ 0.84
HDAC6-225ENST00000483506 NBNO60934 754 aa20.31■□□□□ 0.84
HDAC6-225ENST00000483506 THPOP40225 353 aa20.31■□□□□ 0.84
HDAC6-225ENST00000483506 SMAD3P84022 425 aaKnown RBP20.31■□□□□ 0.84
HDAC6-225ENST00000483506 FAM26DQ5JW98 314 aa20.31■□□□□ 0.84
HDAC6-225ENST00000483506 RUFY4Q6ZNE9 571 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms