RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 VAV3Q9UKW4 847 aa18.37■□□□□ 0.53
COL2A1-206ENST00000483376 IGSF9BQ9UPX0 1349 aa18.37■□□□□ 0.53
COL2A1-206ENST00000483376 C17orf102A2RUQ5 167 aa18.36■□□□□ 0.53
COL2A1-206ENST00000483376 DDX39AO00148 427 aaKnown RBP18.36■□□□□ 0.53
COL2A1-206ENST00000483376 BFSP2Q13515 415 aa18.36■□□□□ 0.53
COL2A1-206ENST00000483376 GNL2Q13823 731 aaKnown RBP18.36■□□□□ 0.53
COL2A1-206ENST00000483376 LARP1BQ659C4 914 aaKnown RBP18.36■□□□□ 0.53
COL2A1-206ENST00000483376 RPAINQ86UA6 219 aa18.36■□□□□ 0.53
COL2A1-206ENST00000483376 SERINC5Q86VE9 423 aa18.36■□□□□ 0.53
COL2A1-206ENST00000483376 POTEDQ86YR6 584 aa18.36■□□□□ 0.53
COL2A1-206ENST00000483376 HSCBQ8IWL3 235 aa18.36■□□□□ 0.53
COL2A1-206ENST00000483376 CCDC155Q8N6L0 562 aa18.36■□□□□ 0.53
COL2A1-206ENST00000483376 MTMR9Q96QG7 549 aa18.36■□□□□ 0.53
COL2A1-206ENST00000483376 UNC45AQ9H3U1 944 aa18.36■□□□□ 0.53
COL2A1-206ENST00000483376 ZNF302Q9NR11 478 aa18.36■□□□□ 0.53
COL2A1-206ENST00000483376 NOL7Q9UMY1 257 aaKnown RBP18.36■□□□□ 0.53
COL2A1-206ENST00000483376 NOD1Q9Y239 953 aa18.36■□□□□ 0.53
COL2A1-206ENST00000483376 MBLAC1A4D2B0 266 aaPredicted RBP18.35■□□□□ 0.53
COL2A1-206ENST00000483376 RRN3P2A6NIE6 340 aa18.35■□□□□ 0.53
COL2A1-206ENST00000483376 H3BQV1 296 aa18.35■□□□□ 0.53
COL2A1-206ENST00000483376 CAND2O75155 1236 aa18.35■□□□□ 0.53
COL2A1-206ENST00000483376 BAG4O95429 457 aaKnown RBP18.35■□□□□ 0.53
COL2A1-206ENST00000483376 RPLP2P05387 115 aaKnown RBP18.35■□□□□ 0.53
COL2A1-206ENST00000483376 SPIRE1Q08AE8 756 aa18.35■□□□□ 0.53
COL2A1-206ENST00000483376 HIC1Q14526 733 aa18.35■□□□□ 0.53
COL2A1-206ENST00000483376 PLCB4Q15147 1175 aa18.35■□□□□ 0.53
COL2A1-206ENST00000483376 ATP8B4Q8TF62 1192 aa18.35■□□□□ 0.53
COL2A1-206ENST00000483376 BADQ92934 168 aa18.35■□□□□ 0.53
COL2A1-206ENST00000483376 COL1A2P08123 1366 aa18.34■□□□□ 0.53
COL2A1-206ENST00000483376 WNT7AO00755 349 aa18.34■□□□□ 0.53
COL2A1-206ENST00000483376 BACH1O14867 736 aa18.34■□□□□ 0.53
COL2A1-206ENST00000483376 HBP1O60381 514 aa18.34■□□□□ 0.53
COL2A1-206ENST00000483376 PARNO95453 639 aaKnown RBP18.34■□□□□ 0.53
COL2A1-206ENST00000483376 CYP2C9P11712 490 aa18.34■□□□□ 0.53
COL2A1-206ENST00000483376 PDIA4P13667 645 aaKnown RBP18.34■□□□□ 0.53
COL2A1-206ENST00000483376 CHMP4BP1P59074 171 aa18.34■□□□□ 0.53
COL2A1-206ENST00000483376 PPFIA1Q13136 1202 aa18.34■□□□□ 0.53
COL2A1-206ENST00000483376 CALCRLQ16602 461 aa18.34■□□□□ 0.53
COL2A1-206ENST00000483376 TRIM71Q2Q1W2 868 aaKnown RBP18.34■□□□□ 0.53
COL2A1-206ENST00000483376 RILPL1Q5EBL4 403 aa18.34■□□□□ 0.53
COL2A1-206ENST00000483376 SWSAP1Q6NVH7 229 aa18.34■□□□□ 0.53
COL2A1-206ENST00000483376 PDXDC2PQ6P474 469 aa18.34■□□□□ 0.53
COL2A1-206ENST00000483376 CHRDL2Q6WN34 429 aa18.34■□□□□ 0.53
COL2A1-206ENST00000483376 TMEM199Q8N511 208 aa18.34■□□□□ 0.53
COL2A1-206ENST00000483376 LMBR1Q8WVP7 490 aa18.34■□□□□ 0.53
COL2A1-206ENST00000483376 DHX38Q92620 1227 aaKnown RBP18.34■□□□□ 0.53
COL2A1-206ENST00000483376 FAM167AQ96KS9 214 aa18.34■□□□□ 0.53
COL2A1-206ENST00000483376 LAMA3Q16787 3333 aa18.34■□□□□ 0.53
COL2A1-206ENST00000483376 POTEB3A0JP26 581 aa18.33■□□□□ 0.52
COL2A1-206ENST00000483376 RFC2P35250 354 aa18.33■□□□□ 0.52
COL2A1-206ENST00000483376 MDM2Q00987 491 aaPredicted RBP18.33■□□□□ 0.52
COL2A1-206ENST00000483376 FPGSQ05932 587 aa18.33■□□□□ 0.52
COL2A1-206ENST00000483376 GRIK4Q16099 956 aa18.33■□□□□ 0.52
COL2A1-206ENST00000483376 TTC38Q5R3I4 469 aa18.33■□□□□ 0.52
COL2A1-206ENST00000483376 TAF2Q6P1X5 1199 aa18.33■□□□□ 0.52
COL2A1-206ENST00000483376 POTEBQ6S5H4 581 aa18.33■□□□□ 0.52
COL2A1-206ENST00000483376 MIER3Q7Z3K6 550 aa18.33■□□□□ 0.52
COL2A1-206ENST00000483376 PPP1R13LQ8WUF5 828 aa18.33■□□□□ 0.52
COL2A1-206ENST00000483376 BBXQ8WY36 941 aaPredicted RBP18.33■□□□□ 0.52
COL2A1-206ENST00000483376 ATP6V0A1Q93050 837 aa18.33■□□□□ 0.52
COL2A1-206ENST00000483376 GJA10Q969M2 543 aa18.33■□□□□ 0.52
COL2A1-206ENST00000483376 UIMC1Q96RL1 719 aa18.33■□□□□ 0.52
COL2A1-206ENST00000483376 WNT8AQ9H1J5 351 aa18.33■□□□□ 0.52
COL2A1-206ENST00000483376 SETD4Q9NVD3 440 aa18.33■□□□□ 0.52
COL2A1-206ENST00000483376 SAMM50Q9Y512 469 aa18.33■□□□□ 0.52
COL2A1-206ENST00000483376 PFKMP08237 780 aa18.32■□□□□ 0.52
COL2A1-206ENST00000483376 INSRRP14616 1297 aa18.32■□□□□ 0.52
COL2A1-206ENST00000483376 ATP4AP20648 1035 aa18.32■□□□□ 0.52
COL2A1-206ENST00000483376 MARK3P27448 753 aa18.32■□□□□ 0.52
COL2A1-206ENST00000483376 TOB1P50616 345 aaPredicted RBP18.32■□□□□ 0.52
COL2A1-206ENST00000483376 PPIGQ13427 754 aaKnown RBP eCLIP18.32■□□□□ 0.526e-8■■■■□ 20.1
COL2A1-206ENST00000483376 MARCH8Q5T0T0 291 aa18.32■□□□□ 0.52
COL2A1-206ENST00000483376 BRAPQ7Z569 592 aa18.32■□□□□ 0.52
COL2A1-206ENST00000483376 PPP1R12CQ9BZL4 782 aa18.32■□□□□ 0.52
COL2A1-206ENST00000483376 GABBR1Q9UBS5 961 aa18.32■□□□□ 0.52
COL2A1-206ENST00000483376 PCDHA12Q9UN75 941 aa18.32■□□□□ 0.52
COL2A1-206ENST00000483376 COLQQ9Y215 455 aaPredicted RBP18.32■□□□□ 0.52
COL2A1-206ENST00000483376 UMODL1Q5DID0 1318 aa18.31■□□□□ 0.52
COL2A1-206ENST00000483376 LAD1O00515 517 aa18.31■□□□□ 0.52
COL2A1-206ENST00000483376 TREHO43280 583 aa18.31■□□□□ 0.52
COL2A1-206ENST00000483376 ZNF862O60290 1169 aa18.31■□□□□ 0.52
COL2A1-206ENST00000483376 MARCH6O60337 910 aa18.31■□□□□ 0.52
COL2A1-206ENST00000483376 DKC1O60832 514 aaKnown RBP eCLIP18.31■□□□□ 0.52
COL2A1-206ENST00000483376 SYT1P21579 422 aa18.31■□□□□ 0.52
COL2A1-206ENST00000483376 CYP2C18P33260 490 aa18.31■□□□□ 0.52
COL2A1-206ENST00000483376 ZNF200P98182 395 aaPredicted RBP18.31■□□□□ 0.52
COL2A1-206ENST00000483376 EPHA7Q15375 998 aa18.31■□□□□ 0.52
COL2A1-206ENST00000483376 ZNF484Q5JVG2 852 aa18.31■□□□□ 0.52
COL2A1-206ENST00000483376 C4orf32Q8N8J7 132 aa18.31■□□□□ 0.52
COL2A1-206ENST00000483376 RETREG2Q8NC44 543 aa18.31■□□□□ 0.52
COL2A1-206ENST00000483376 NEK9Q8TD19 979 aa18.31■□□□□ 0.52
COL2A1-206ENST00000483376 UBE2OQ9C0C9 1292 aaKnown RBP18.31■□□□□ 0.52
COL2A1-206ENST00000483376 TMEM60Q9H2L4 133 aa18.31■□□□□ 0.52
COL2A1-206ENST00000483376 TUBE1Q9UJT0 475 aa18.31■□□□□ 0.52
COL2A1-206ENST00000483376 CEP131Q9UPN4 1083 aa18.31■□□□□ 0.52
COL2A1-206ENST00000483376 TRPC6Q9Y210 931 aa18.31■□□□□ 0.52
COL2A1-206ENST00000483376 EML1O00423 815 aa18.3■□□□□ 0.52
COL2A1-206ENST00000483376 CHMP2AO43633 222 aa18.3■□□□□ 0.52
COL2A1-206ENST00000483376 P4HBP07237 508 aaKnown RBP18.3■□□□□ 0.52
COL2A1-206ENST00000483376 OR52Z1P0C646 297 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms