RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 DPH6Q7L8W6 267 aa4.95□□□□□ -1.62
LAPTM4A-202ENST00000483117 SCUBE1Q8IWY4 988 aa4.95□□□□□ -1.62
LAPTM4A-202ENST00000483117 CKAP2LQ8IYA6 745 aa4.95□□□□□ -1.62
LAPTM4A-202ENST00000483117 Q8N1X5 172 aa4.95□□□□□ -1.62
LAPTM4A-202ENST00000483117 ZNF669Q96BR6 464 aaPredicted RBP4.95□□□□□ -1.62
LAPTM4A-202ENST00000483117 LRRC37BQ96QE4 947 aa4.95□□□□□ -1.62
LAPTM4A-202ENST00000483117 CDK5RAP1Q96SZ6 601 aaKnown RBP4.95□□□□□ -1.62
LAPTM4A-202ENST00000483117 CDC6Q99741 560 aa4.95□□□□□ -1.62
LAPTM4A-202ENST00000483117 KATNBL1Q9H079 304 aa4.95□□□□□ -1.62
LAPTM4A-202ENST00000483117 RIC8BQ9NVN3 520 aa4.95□□□□□ -1.62
LAPTM4A-202ENST00000483117 SRPK3Q9UPE1 567 aa4.95□□□□□ -1.62
LAPTM4A-202ENST00000483117 TCAF1Q9Y4C2 921 aa4.95□□□□□ -1.62
LAPTM4A-202ENST00000483117 PCDHA8Q9Y5H6 950 aa4.95□□□□□ -1.62
LAPTM4A-202ENST00000483117 SLC4A7Q9Y6M7 1214 aa4.95□□□□□ -1.62
LAPTM4A-202ENST00000483117 TRBV23-1A0A0A0MS06 115 aa4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 ESYT3A0FGR9 886 aa4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 AQP7O14520 342 aa4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 U2SURPO15042 1029 aaKnown RBP4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 DIAPH1O60610 1272 aaKnown RBP4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 AMY2AP04746 511 aa4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 C6orf222P0C671 652 aaPredicted RBP4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 SRGAP2CP0DJJ0 459 aa4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 PYGMP11217 842 aa4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 PTPN1P18031 435 aaKnown RBP4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 KRT15P19012 456 aa4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 AMY2BP19961 511 aa4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 TACR2P21452 398 aa4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 SELENOPP49908 381 aa4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 SSRP1Q08945 709 aaKnown RBP4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 DBPQ10586 325 aaPredicted RBP4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 SPDYAQ5MJ70 313 aa4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 TCTN3Q6NUS6 607 aa4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 OSTM1Q86WC4 334 aa4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 PTRH1Q86Y79 214 aaKnown RBP4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 PCDH19Q8TAB3 1148 aa4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 LMF1Q96S06 567 aa4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 SEC61A2Q9H9S3 476 aa4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 CATSPERZQ9NTU4 200 aa4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 SRRDQ9UH36 339 aa4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 CBLCQ9ULV8 474 aa4.94□□□□□ -1.62
LAPTM4A-202ENST00000483117 MAN2B1O00754 1011 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 KCNK3O14649 394 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 MUSKO15146 869 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 FOXS1O43638 330 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 AMHP03971 560 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 PDE6AP16499 860 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 JAM2P57087 298 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 GUCY1A3Q02108 690 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 RASGRF1Q13972 1273 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 USP10Q14694 798 aaKnown RBP4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 GPR19Q15760 415 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 NAALADL2Q58DX5 795 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 CRIP3Q6Q6R5 217 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 MAMDC2Q7Z304 686 aaPredicted RBP4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 REXO1L1PQ8IX06 675 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 IFNL2Q8IZJ0 200 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 NLGN4XQ8N0W4 816 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 ZBTB38Q8NAP3 1195 aaPredicted RBP4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 GIMAP8Q8ND71 665 aaPredicted RBP4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 PTPRN2Q92932 1015 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 FBXW5Q969U6 566 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 EXOC2Q96KP1 924 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 ZNF747Q9BV97 191 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 VPS11Q9H270 941 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 ARHGAP28Q9P2N2 729 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 PPP1R1BQ9UD71 204 aaPredicted RBP4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 PCDHA9Q9Y5H5 950 aa4.93□□□□□ -1.62
LAPTM4A-202ENST00000483117 WNT9AO14904 365 aa4.92□□□□□ -1.62
LAPTM4A-202ENST00000483117 FAM153BP0C7A2 387 aa4.92□□□□□ -1.62
LAPTM4A-202ENST00000483117 POLD1P28340 1107 aa4.92□□□□□ -1.62
LAPTM4A-202ENST00000483117 RRADP55042 308 aa4.92□□□□□ -1.62
LAPTM4A-202ENST00000483117 SUMO1P63165 101 aaKnown RBP4.92□□□□□ -1.62
LAPTM4A-202ENST00000483117 TOP3AQ13472 1001 aaPredicted RBP4.92□□□□□ -1.62
LAPTM4A-202ENST00000483117 NOLC1Q14978 699 aaKnown RBP eCLIP4.92□□□□□ -1.622e-7■■■■□ 21.9
LAPTM4A-202ENST00000483117 TAX1BP1Q86VP1 789 aa4.92□□□□□ -1.62
LAPTM4A-202ENST00000483117 NEIL1Q96FI4 390 aaPredicted RBP4.92□□□□□ -1.62
LAPTM4A-202ENST00000483117 CARD11Q9BXL7 1154 aa4.92□□□□□ -1.62
LAPTM4A-202ENST00000483117 CCDC113Q9H0I3 377 aa4.92□□□□□ -1.62
LAPTM4A-202ENST00000483117 ATP23Q9Y6H3 246 aa4.92□□□□□ -1.62
LAPTM4A-202ENST00000483117 ARVCFO00192 962 aa4.91□□□□□ -1.62
LAPTM4A-202ENST00000483117 MC4RP32245 332 aa4.91□□□□□ -1.62
LAPTM4A-202ENST00000483117 ZC3H6P61129 1189 aaKnown RBP4.91□□□□□ -1.62
LAPTM4A-202ENST00000483117 RNF151Q2KHN1 245 aa4.91□□□□□ -1.62
LAPTM4A-202ENST00000483117 WDR72Q3MJ13 1102 aa4.91□□□□□ -1.62
LAPTM4A-202ENST00000483117 C16orf59Q7L2K0 433 aa4.91□□□□□ -1.62
LAPTM4A-202ENST00000483117 ZFPM1Q8IX07 1006 aa4.91□□□□□ -1.62
LAPTM4A-202ENST00000483117 IPO9Q96P70 1041 aaKnown RBP4.91□□□□□ -1.62
LAPTM4A-202ENST00000483117 ZFR2Q9UPR6 939 aaKnown RBP4.91□□□□□ -1.62
LAPTM4A-202ENST00000483117 CCDC66A2RUB6 948 aa4.9□□□□□ -1.63
LAPTM4A-202ENST00000483117 PRAMEF25A6NGN4 478 aa4.9□□□□□ -1.63
LAPTM4A-202ENST00000483117 ZNF561-AS1K7EIQ3 104 aa4.9□□□□□ -1.63
LAPTM4A-202ENST00000483117 CRTAMO95727 393 aa4.9□□□□□ -1.63
LAPTM4A-202ENST00000483117 SLPIP03973 132 aa4.9□□□□□ -1.63
LAPTM4A-202ENST00000483117 C4BPAP04003 597 aaKnown RBP4.9□□□□□ -1.63
LAPTM4A-202ENST00000483117 PTGS1P23219 599 aa4.9□□□□□ -1.63
LAPTM4A-202ENST00000483117 ADCY8P40145 1251 aa4.9□□□□□ -1.63
LAPTM4A-202ENST00000483117 GDF5P43026 501 aa4.9□□□□□ -1.63
LAPTM4A-202ENST00000483117 DNM2P50570 870 aa4.9□□□□□ -1.63
LAPTM4A-202ENST00000483117 RAC3P60763 192 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms