RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 C16orf86Q6ZW13 317 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 YTHDF3Q7Z739 585 aaKnown RBP13.59□□□□□ -0.23
CCDC78-213ENST00000482878 SPDYE1Q8NFV5 336 aaPredicted RBP13.59□□□□□ -0.23
CCDC78-213ENST00000482878 GJA10Q969M2 543 aa13.59□□□□□ -0.23
CCDC78-213ENST00000482878 THRAP3Q9Y2W1 955 aaKnown RBP13.59□□□□□ -0.23
CCDC78-213ENST00000482878 FRMPD2Q68DX3 1309 aaPredicted RBP13.59□□□□□ -0.23
CCDC78-213ENST00000482878 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.58□□□□□ -0.24
CCDC78-213ENST00000482878 SSU72P8A0A1W2PR75 194 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 CAND2O75155 1236 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 NOL4O94818 638 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 CLTAP09496 248 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 GSTO1P78417 241 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 GRIK3Q13003 919 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 SNX1Q13596 522 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 CAPRIN2Q6IMN6 1127 aaKnown RBP13.58□□□□□ -0.24
CCDC78-213ENST00000482878 FAM228AQ86W67 206 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 CAVIN3Q969G5 261 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 CYFIP2Q96F07 1278 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 STAMBPL1Q96FJ0 436 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 PLCD4Q9BRC7 762 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 ESYT3A0FGR9 886 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 BTDP43251 543 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 IKQ13123 557 aaPredicted RBP13.58□□□□□ -0.24
CCDC78-213ENST00000482878 KANSL2Q9H9L4 492 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 PPP1R1BQ9UD71 204 aaPredicted RBP13.58□□□□□ -0.24
CCDC78-213ENST00000482878 MAST2Q6P0Q8 1798 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 FAM153BP0C7A2 387 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 MDH1P40925 334 aaKnown RBP13.58□□□□□ -0.24
CCDC78-213ENST00000482878 CARSP49589 748 aaKnown RBP13.58□□□□□ -0.24
CCDC78-213ENST00000482878 ORC2Q13416 577 aaPredicted RBP13.58□□□□□ -0.24
CCDC78-213ENST00000482878 TMEM266Q2M3C6 531 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 FAM153CQ494X1 144 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 FGFBP2Q9BYJ0 223 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 RIOX1Q9H6W3 641 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 ZNF287Q9HBT7 754 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 FAM153AQ9UHL3 310 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 NARFQ9UHQ1 456 aa13.58□□□□□ -0.24
CCDC78-213ENST00000482878 ROBO1Q9Y6N7 1651 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 EP400Q96L91 3159 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 ESYT2A0FGR8 921 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 RBAK-RBAKDNI3L0D1 243 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 PALMO75781 387 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 FTCDO95954 541 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 FAM107AO95990 144 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 EPB41P11171 864 aaKnown RBP13.57□□□□□ -0.24
CCDC78-213ENST00000482878 TNFRSF8P28908 595 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 CFAP221Q4G0U5 840 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 ZCWPW2Q504Y3 356 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 FAM83BQ5T0W9 1011 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 RNF10Q8N5U6 811 aaKnown RBP13.57□□□□□ -0.24
CCDC78-213ENST00000482878 NFU1Q9UMS0 254 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 SH3BP1Q9Y3L3 701 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 RWDD2BP57060 319 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 INHBEP58166 350 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 PSMD2Q13200 908 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 KRT79Q5XKE5 535 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 KDM7AQ6ZMT4 941 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 CACNA2D3Q8IZS8 1091 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 TSG101Q99816 390 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 RIC8AQ9NPQ8 531 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 COL4A3BPQ9Y5P4 624 aa13.57□□□□□ -0.24
CCDC78-213ENST00000482878 TRAF5O00463 557 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 IFFO1Q0D2I5 559 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 DOK7Q18PE1 504 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 SLC9C1Q4G0N8 1177 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 TMEM119Q4V9L6 283 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 CPLX4Q7Z7G2 160 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 MYOCDQ8IZQ8 938 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 DNAJC19Q96DA6 116 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 EPB41L5Q9HCM4 733 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 TBC1D7Q9P0N9 293 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 PACSIN2Q9UNF0 486 aaPredicted RBP13.56□□□□□ -0.24
CCDC78-213ENST00000482878 UTRNP46939 3433 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 STRCQ7RTU9 1775 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 DNM1LO00429 736 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 KLRC1P26715 233 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 SMARCA1P28370 1054 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 SCNN1DP51172 638 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 POLR2FP61218 127 aaKnown RBP13.56□□□□□ -0.24
CCDC78-213ENST00000482878 COASYQ13057 564 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 DRP2Q13474 957 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 PDIA5Q14554 519 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 SFMBT2Q5VUG0 894 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 ARMC3Q5W041 872 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 SPAG5Q96R06 1193 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 EDEM3Q9BZQ6 932 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 NOD2Q9HC29 1040 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 GDF3Q9NR23 364 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 CEP72Q9P209 647 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 WNK3Q9BYP7 1800 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 HEXIM1O94992 359 aaKnown RBP13.56□□□□□ -0.24
CCDC78-213ENST00000482878 SNUPNO95149 360 aaKnown RBP13.56□□□□□ -0.24
CCDC78-213ENST00000482878 LDHCP07864 332 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 ADCY7P51828 1080 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 SLC8A3P57103 927 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 FKBP3Q00688 224 aaKnown RBP13.56□□□□□ -0.24
CCDC78-213ENST00000482878 GUCY2DQ02846 1103 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 ARID5AQ03989 594 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 SPRED3Q2MJR0 410 aa13.56□□□□□ -0.24
CCDC78-213ENST00000482878 GLE1Q53GS7 698 aaKnown RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms