RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 KIZQ2M2Z5 673 aa4.16□□□□□ -1.74
KDM1A-204ENST00000481879 LSM12Q3MHD2 195 aaKnown RBP4.16□□□□□ -1.74
KDM1A-204ENST00000481879 HABP4Q5JVS0 413 aaKnown RBP4.16□□□□□ -1.74
KDM1A-204ENST00000481879 IGFL4Q6B9Z1 124 aa4.16□□□□□ -1.74
KDM1A-204ENST00000481879 DPP8Q6V1X1 898 aaPredicted RBP4.16□□□□□ -1.74
KDM1A-204ENST00000481879 Q6ZSN1 163 aa4.16□□□□□ -1.74
KDM1A-204ENST00000481879 DCAF4Q8WV16 495 aa4.16□□□□□ -1.74
KDM1A-204ENST00000481879 CHFRQ96EP1 664 aa4.16□□□□□ -1.74
KDM1A-204ENST00000481879 WDR33Q9C0J8 1336 aaKnown RBP4.16□□□□□ -1.74
KDM1A-204ENST00000481879 ESYT3A0FGR9 886 aa4.15□□□□□ -1.75
KDM1A-204ENST00000481879 ACOT7O00154 380 aa4.15□□□□□ -1.75
KDM1A-204ENST00000481879 NARSO43776 548 aaKnown RBP4.15□□□□□ -1.75
KDM1A-204ENST00000481879 MCM7P33993 719 aa4.15□□□□□ -1.75
KDM1A-204ENST00000481879 PTH1RQ03431 593 aa4.15□□□□□ -1.75
KDM1A-204ENST00000481879 SMN1Q16637 294 aaKnown RBP4.15□□□□□ -1.75
KDM1A-204ENST00000481879 RNF151Q2KHN1 245 aa4.15□□□□□ -1.75
KDM1A-204ENST00000481879 KCNT2Q6UVM3 1135 aa4.15□□□□□ -1.75
KDM1A-204ENST00000481879 KCTD1Q719H9 257 aa4.15□□□□□ -1.75
KDM1A-204ENST00000481879 POLNQ7Z5Q5 900 aa4.15□□□□□ -1.75
KDM1A-204ENST00000481879 AMER2Q8N7J2 671 aa4.15□□□□□ -1.75
KDM1A-204ENST00000481879 ZFYVE21Q9BQ24 234 aa4.15□□□□□ -1.75
KDM1A-204ENST00000481879 OAZ3Q9UMX2 235 aa4.15□□□□□ -1.75
KDM1A-204ENST00000481879 PRODHO43272 600 aa4.14□□□□□ -1.75
KDM1A-204ENST00000481879 GPR85P60893 370 aa4.14□□□□□ -1.75
KDM1A-204ENST00000481879 DGCR2P98153 550 aa4.14□□□□□ -1.75
KDM1A-204ENST00000481879 DPTQ07507 201 aa4.14□□□□□ -1.75
KDM1A-204ENST00000481879 TOP3AQ13472 1001 aaPredicted RBP4.14□□□□□ -1.75
KDM1A-204ENST00000481879 NOLC1Q14978 699 aaKnown RBP eCLIP4.14□□□□□ -1.75
KDM1A-204ENST00000481879 ZMAT1Q5H9K5 638 aa4.14□□□□□ -1.75
KDM1A-204ENST00000481879 MAMDC4Q6UXC1 1216 aa4.14□□□□□ -1.75
KDM1A-204ENST00000481879 C1orf210Q8IVY1 113 aa4.14□□□□□ -1.75
KDM1A-204ENST00000481879 IFNL3Q8IZI9 196 aa4.14□□□□□ -1.75
KDM1A-204ENST00000481879 FAM89AQ96GI7 184 aa4.14□□□□□ -1.75
KDM1A-204ENST00000481879 NAF1Q96HR8 494 aaKnown RBP4.14□□□□□ -1.75
KDM1A-204ENST00000481879 SGSM3Q96HU1 749 aa4.14□□□□□ -1.75
KDM1A-204ENST00000481879 SCYL1Q96KG9 808 aa4.14□□□□□ -1.75
KDM1A-204ENST00000481879 CEP89Q96ST8 783 aa4.14□□□□□ -1.75
KDM1A-204ENST00000481879 TRIM8Q9BZR9 551 aa4.14□□□□□ -1.75
KDM1A-204ENST00000481879 SLC39A2Q9NP94 309 aa4.14□□□□□ -1.75
KDM1A-204ENST00000481879 PODXL2Q9NZ53 605 aa4.14□□□□□ -1.75
KDM1A-204ENST00000481879 KIAA1522Q9P206 1035 aaPredicted RBP4.14□□□□□ -1.75
KDM1A-204ENST00000481879 SLC30A1Q9Y6M5 507 aa4.14□□□□□ -1.75
KDM1A-204ENST00000481879 FAM47E-STBD1D6RA91 191 aa4.13□□□□□ -1.75
KDM1A-204ENST00000481879 CDC14BO60729 498 aa4.13□□□□□ -1.75
KDM1A-204ENST00000481879 SOD2P04179 222 aa4.13□□□□□ -1.75
KDM1A-204ENST00000481879 FGFR1P11362 822 aa4.13□□□□□ -1.75
KDM1A-204ENST00000481879 RRADP55042 308 aa4.13□□□□□ -1.75
KDM1A-204ENST00000481879 INHBEP58166 350 aa4.13□□□□□ -1.75
KDM1A-204ENST00000481879 DBPQ10586 325 aaPredicted RBP4.13□□□□□ -1.75
KDM1A-204ENST00000481879 BTBD8Q5XKL5 378 aa4.13□□□□□ -1.75
KDM1A-204ENST00000481879 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.13□□□□□ -1.75
KDM1A-204ENST00000481879 OR14A2Q96R54 314 aa4.13□□□□□ -1.75
KDM1A-204ENST00000481879 DPYSL5Q9BPU6 564 aa4.13□□□□□ -1.75
KDM1A-204ENST00000481879 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.13□□□□□ -1.756e-10■□□□□ 10.5
KDM1A-204ENST00000481879 AARSD1Q9BTE6 412 aaKnown RBP4.13□□□□□ -1.75
KDM1A-204ENST00000481879 IKZF4Q9H2S9 585 aa4.13□□□□□ -1.75
KDM1A-204ENST00000481879 C12orf65Q9H3J6 166 aaKnown RBP4.13□□□□□ -1.75
KDM1A-204ENST00000481879 ST7Q9NRC1 585 aa4.13□□□□□ -1.75
KDM1A-204ENST00000481879 R3HCC1Q9Y3T6 440 aaKnown RBP4.13□□□□□ -1.75
KDM1A-204ENST00000481879 NR2E1Q9Y466 385 aa4.13□□□□□ -1.75
KDM1A-204ENST00000481879 C1SP09871 688 aa4.12□□□□□ -1.75
KDM1A-204ENST00000481879 PABPC1P11940 636 aaKnown RBP4.12□□□□□ -1.75
KDM1A-204ENST00000481879 RPS19P39019 145 aaKnown RBP4.12□□□□□ -1.75
KDM1A-204ENST00000481879 NTRK3Q16288 839 aa4.12□□□□□ -1.75
KDM1A-204ENST00000481879 WDR72Q3MJ13 1102 aa4.12□□□□□ -1.75
KDM1A-204ENST00000481879 STYK1Q6J9G0 422 aa4.12□□□□□ -1.75
KDM1A-204ENST00000481879 NSMFQ6X4W1 530 aa4.12□□□□□ -1.75
KDM1A-204ENST00000481879 IL17DQ8TAD2 202 aa4.12□□□□□ -1.75
KDM1A-204ENST00000481879 PLEKHG4BQ96PX9 1271 aa4.12□□□□□ -1.75
KDM1A-204ENST00000481879 CD244Q9BZW8 370 aa4.12□□□□□ -1.75
KDM1A-204ENST00000481879 IPPKQ9H8X2 491 aa4.12□□□□□ -1.75
KDM1A-204ENST00000481879 ZNF408Q9H9D4 720 aa4.12□□□□□ -1.75
KDM1A-204ENST00000481879 ARHGAP28Q9P2N2 729 aa4.12□□□□□ -1.75
KDM1A-204ENST00000481879 CCDC9Q9Y3X0 531 aaKnown RBP4.12□□□□□ -1.75
KDM1A-204ENST00000481879 TCRBV5S4A2TA0A5A2 114 aa4.11□□□□□ -1.75
KDM1A-204ENST00000481879 BLACEA4D250 179 aa4.11□□□□□ -1.75
KDM1A-204ENST00000481879 IQCA1LA6NCM1 817 aa4.11□□□□□ -1.75
KDM1A-204ENST00000481879 MATN2O00339 956 aa4.11□□□□□ -1.75
KDM1A-204ENST00000481879 ACRV1P26436 265 aa4.11□□□□□ -1.75
KDM1A-204ENST00000481879 ETV4P43268 484 aa4.11□□□□□ -1.75
KDM1A-204ENST00000481879 INHBCP55103 352 aa4.11□□□□□ -1.75
KDM1A-204ENST00000481879 DUSP8Q13202 625 aa4.11□□□□□ -1.75
KDM1A-204ENST00000481879 GNL2Q13823 731 aaKnown RBP4.11□□□□□ -1.75
KDM1A-204ENST00000481879 NFYCQ13952 458 aa4.11□□□□□ -1.75
KDM1A-204ENST00000481879 DPH6Q7L8W6 267 aa4.11□□□□□ -1.75
KDM1A-204ENST00000481879 NLGN4XQ8N0W4 816 aa4.11□□□□□ -1.75
KDM1A-204ENST00000481879 SH3RF2Q8TEC5 729 aa4.11□□□□□ -1.75
KDM1A-204ENST00000481879 NEU4Q8WWR8 484 aaPredicted RBP4.11□□□□□ -1.75
KDM1A-204ENST00000481879 OSBP2Q969R2 916 aa4.11□□□□□ -1.75
KDM1A-204ENST00000481879 ALG1Q9BT22 464 aa4.11□□□□□ -1.75
KDM1A-204ENST00000481879 PLA2G12BQ9BX93 195 aa4.11□□□□□ -1.75
KDM1A-204ENST00000481879 ZDHHC5Q9C0B5 715 aa4.11□□□□□ -1.75
KDM1A-204ENST00000481879 PUF60Q9UHX1 559 aaKnown RBP4.11□□□□□ -1.75
KDM1A-204ENST00000481879 A0A087X1B8 175 aa4.1□□□□□ -1.75
KDM1A-204ENST00000481879 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP4.1□□□□□ -1.75
KDM1A-204ENST00000481879 UNCXA6NJT0 531 aa4.1□□□□□ -1.75
KDM1A-204ENST00000481879 FAM90A27PA6NNH2 459 aa4.1□□□□□ -1.75
KDM1A-204ENST00000481879 ARHGAP6O43182 974 aa4.1□□□□□ -1.75
KDM1A-204ENST00000481879 PTPN1P18031 435 aaKnown RBP4.1□□□□□ -1.75
KDM1A-204ENST00000481879 HIBADHP31937 336 aaKnown RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms