RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 TMEM145Q8NBT3 493 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 NETO2Q8NC67 525 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 Q8TCH9 128 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 USP33Q8TEY7 942 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 MBD6Q96DN6 1003 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 C1orf159Q96HA4 380 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 SGSM3Q96HU1 749 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 TANGO6Q9C0B7 1094 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 VWDEQ8N2E2 1590 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 SPATA31A6Q5VVP1 1343 aa3.41□□□□□ -1.86
USH2A-204ENST00000481786 WDR33Q9C0J8 1336 aaKnown RBP3.41□□□□□ -1.86
USH2A-204ENST00000481786 AGRPO00253 132 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 PLSCR1O15162 318 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 MEFVO15553 781 aaPredicted RBP3.4□□□□□ -1.87
USH2A-204ENST00000481786 DLX3O60479 287 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 ZNF623O75123 536 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 NTRK1P04629 796 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 LCP1P13796 627 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 ATP2B1P20020 1258 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 IL12RB1P42701 662 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 KCNJ6P48051 423 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 KRTAP10-9P60411 292 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 RPL11P62913 178 aaKnown RBP3.4□□□□□ -1.87
USH2A-204ENST00000481786 MAP4K2Q12851 820 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 KCNAB2Q13303 367 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 NLRP10Q86W26 655 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 TEX2Q8IWB9 1127 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 PPIL6Q8IXY8 311 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 CKAP2LQ8IYA6 745 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 Q8N1Y9 231 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 KYQ8NBH2 561 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 RCBTB1Q8NDN9 531 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 ST13P5Q8NFI4 369 aaPredicted RBP3.4□□□□□ -1.87
USH2A-204ENST00000481786 DIO2Q92813 273 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 PEX11GQ96HA9 241 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 LCORQ96JN0 433 aaPredicted RBP3.4□□□□□ -1.87
USH2A-204ENST00000481786 TRIM55Q9BYV6 548 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 TRIM8Q9BZR9 551 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 MARCH2Q9P0N8 246 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 MSRB2Q9Y3D2 182 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 TCAF1Q9Y4C2 921 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 TIMM13Q9Y5L4 95 aaPredicted RBP3.4□□□□□ -1.87
USH2A-204ENST00000481786 ZNF518AQ6AHZ1 1483 aa3.4□□□□□ -1.87
USH2A-204ENST00000481786 ZNF142P52746 1687 aaPredicted RBP3.39□□□□□ -1.87
USH2A-204ENST00000481786 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.39□□□□□ -1.87
USH2A-204ENST00000481786 SYNMO15061 1565 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 IQCA1LA6NCM1 817 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 PLEKHD1A6NEE1 506 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 C22orf46C9J442 243 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 NARSO43776 548 aaKnown RBP3.39□□□□□ -1.87
USH2A-204ENST00000481786 ZBTB7AO95365 584 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 FPR2P25090 351 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 LTBRP36941 435 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 BCL6P41182 706 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 HSP90AA2PQ14568 343 aaPredicted RBP3.39□□□□□ -1.87
USH2A-204ENST00000481786 SLC9A5Q14940 896 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 MIIPQ5JXC2 388 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 MEX3CQ5U5Q3 659 aaKnown RBP3.39□□□□□ -1.87
USH2A-204ENST00000481786 NBPF6Q5VWK0 638 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 RIOX2Q8IUF8 465 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 DNAJC10Q8IXB1 793 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 KCTD13Q8WZ19 329 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 ZNF669Q96BR6 464 aaPredicted RBP3.39□□□□□ -1.87
USH2A-204ENST00000481786 ZNF503Q96F45 646 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 NBPF4Q96M43 638 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 IER2Q9BTL4 223 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 ARHGEF4Q9NR80 690 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 BTG4Q9NY30 223 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 FBXL7Q9UJT9 491 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 NUDT5Q9UKK9 219 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 TESMINQ9Y4I5 508 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 NPFFR2Q9Y5X5 522 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 X6R8D5 127 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 LRP5O75197 1615 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 MYO3AQ8NEV4 1616 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 A2ML1A8K2U0 1454 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 MED14O60244 1454 aa3.39□□□□□ -1.87
USH2A-204ENST00000481786 CDK13Q14004 1512 aaKnown RBP3.39□□□□□ -1.87
USH2A-204ENST00000481786 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.38□□□□□ -1.87
USH2A-204ENST00000481786 NEURL4Q96JN8 1562 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 PLCH2O75038 1416 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 NPHP4O75161 1426 aaPredicted RBP3.38□□□□□ -1.87
USH2A-204ENST00000481786 PDPK1O15530 556 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 SGSM2O43147 1006 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 MYO1BO43795 1136 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 ZNF202O95125 648 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 FGFR1P11362 822 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 LMO1P25800 156 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 SLC6A11P48066 632 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 GTF2A2P52657 109 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 EPHB4P54760 987 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 ITGA1P56199 1179 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 PPP2CBP62714 309 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 PPP2CAP67775 309 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 DPTQ07507 201 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 RBL2Q08999 1139 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 LSAMPQ13449 338 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 SERINC3Q13530 473 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 RASGRF1Q13972 1273 aa3.38□□□□□ -1.87
USH2A-204ENST00000481786 CD300LDQ6UXZ3 194 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms