RNA–Protein interactions for RNA: ENST00000481453.5

MRPL28-209, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 2

Gene MRPL28, Length 2,229 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-209ENST00000481453 POLR3GO15318 223 aaPredicted RBP20.36■□□□□ 0.85
MRPL28-209ENST00000481453 SETQ01105 290 aaPredicted RBP20.36■□□□□ 0.85
MRPL28-209ENST00000481453 BRD3Q15059 726 aa20.36■□□□□ 0.85
MRPL28-209ENST00000481453 OR8K1Q8NGG5 319 aa20.36■□□□□ 0.85
MRPL28-209ENST00000481453 SYTL5Q8TDW5 730 aaPredicted RBP20.36■□□□□ 0.85
MRPL28-209ENST00000481453 ATG4CQ96DT6 458 aa20.36■□□□□ 0.85
MRPL28-209ENST00000481453 C12orf42Q96LP6 360 aa20.36■□□□□ 0.85
MRPL28-209ENST00000481453 CHP1Q99653 195 aa20.36■□□□□ 0.85
MRPL28-209ENST00000481453 SPON1Q9HCB6 807 aa20.36■□□□□ 0.85
MRPL28-209ENST00000481453 HOMER2Q9NSB8 354 aa20.36■□□□□ 0.85
MRPL28-209ENST00000481453 FRMPD4Q14CM0 1322 aa20.36■□□□□ 0.85
MRPL28-209ENST00000481453 TTC26A0AVF1 554 aa20.35■□□□□ 0.85
MRPL28-209ENST00000481453 VWA5AO00534 786 aa20.35■□□□□ 0.85
MRPL28-209ENST00000481453 ZNF577Q9BSK1 485 aa20.35■□□□□ 0.85
MRPL28-209ENST00000481453 FHDC1Q9C0D6 1143 aaPredicted RBP20.35■□□□□ 0.85
MRPL28-209ENST00000481453 LUC7L2Q9Y383 392 aaKnown RBP20.35■□□□□ 0.85
MRPL28-209ENST00000481453 RABGAP1Q9Y3P9 1069 aa20.35■□□□□ 0.85
MRPL28-209ENST00000481453 EPN1Q9Y6I3 576 aaPredicted RBP20.35■□□□□ 0.85
MRPL28-209ENST00000481453 ZHX2Q9Y6X8 837 aa20.35■□□□□ 0.85
MRPL28-209ENST00000481453 COL11A1P12107 1806 aaPredicted RBP20.35■□□□□ 0.85
MRPL28-209ENST00000481453 POLR2AP24928 1970 aaKnown RBP20.35■□□□□ 0.85
MRPL28-209ENST00000481453 CHMP2AO43633 222 aa20.35■□□□□ 0.85
MRPL28-209ENST00000481453 GAS7O60861 476 aa20.35■□□□□ 0.85
MRPL28-209ENST00000481453 SLITRK3O94933 977 aa20.35■□□□□ 0.85
MRPL28-209ENST00000481453 EYA4O95677 639 aa20.35■□□□□ 0.85
MRPL28-209ENST00000481453 DNM2P50570 870 aa20.35■□□□□ 0.85
MRPL28-209ENST00000481453 CTTNQ14247 550 aaKnown RBP20.35■□□□□ 0.85
MRPL28-209ENST00000481453 REPS2Q8NFH8 660 aa20.35■□□□□ 0.85
MRPL28-209ENST00000481453 DYDC2Q96IM9 177 aa20.35■□□□□ 0.85
MRPL28-209ENST00000481453 REEP2Q9BRK0 252 aa20.35■□□□□ 0.85
MRPL28-209ENST00000481453 UBXN6Q9BZV1 441 aa20.35■□□□□ 0.85
MRPL28-209ENST00000481453 UNC45AQ9H3U1 944 aa20.35■□□□□ 0.85
MRPL28-209ENST00000481453 TUFT1Q9NNX1 390 aa20.35■□□□□ 0.85
MRPL28-209ENST00000481453 POTEB2H3BUK9 544 aa20.34■□□□□ 0.85
MRPL28-209ENST00000481453 NDUFA10O95299 355 aa20.34■□□□□ 0.85
MRPL28-209ENST00000481453 HMGCS2P54868 508 aa20.34■□□□□ 0.85
MRPL28-209ENST00000481453 TUBB4BP68371 445 aa20.34■□□□□ 0.85
MRPL28-209ENST00000481453 SMC1AQ14683 1233 aaKnown RBP20.34■□□□□ 0.85
MRPL28-209ENST00000481453 LONRF2Q1L5Z9 754 aa20.34■□□□□ 0.85
MRPL28-209ENST00000481453 TSR1Q2NL82 804 aaKnown RBP20.34■□□□□ 0.85
MRPL28-209ENST00000481453 HERC4Q5GLZ8 1057 aaPredicted RBP20.34■□□□□ 0.85
MRPL28-209ENST00000481453 SCFD1Q8WVM8 642 aa20.34■□□□□ 0.85
MRPL28-209ENST00000481453 RUSC1Q9BVN2 902 aa20.34■□□□□ 0.85
MRPL28-209ENST00000481453 FUT8Q9BYC5 575 aa20.34■□□□□ 0.85
MRPL28-209ENST00000481453 BHMT2Q9H2M3 363 aa20.34■□□□□ 0.85
MRPL28-209ENST00000481453 ANKZF1Q9H8Y5 726 aa20.34■□□□□ 0.85
MRPL28-209ENST00000481453 RASSF10A6NK89 507 aa20.34■□□□□ 0.85
MRPL28-209ENST00000481453 IPO5O00410 1097 aaKnown RBP20.34■□□□□ 0.85
MRPL28-209ENST00000481453 ZBED4O75132 1171 aa20.34■□□□□ 0.85
MRPL28-209ENST00000481453 KRT18P05783 430 aaKnown RBP20.34■□□□□ 0.85
MRPL28-209ENST00000481453 BCRP11274 1271 aa20.34■□□□□ 0.85
MRPL28-209ENST00000481453 MTIF2P46199 727 aaKnown RBP20.34■□□□□ 0.85
MRPL28-209ENST00000481453 NOL9Q5SY16 702 aaKnown RBP20.34■□□□□ 0.85
MRPL28-209ENST00000481453 KCTD17Q8N5Z5 321 aa20.34■□□□□ 0.85
MRPL28-209ENST00000481453 MRPS9P82933 396 aaKnown RBP20.33■□□□□ 0.85
MRPL28-209ENST00000481453 NIPA1Q7RTP0 329 aa20.33■□□□□ 0.85
MRPL28-209ENST00000481453 NOC4LQ9BVI4 516 aaKnown RBP20.33■□□□□ 0.85
MRPL28-209ENST00000481453 WDR11Q9BZH6 1224 aa20.33■□□□□ 0.85
MRPL28-209ENST00000481453 WRAP73Q9P2S5 460 aaPredicted RBP20.33■□□□□ 0.85
MRPL28-209ENST00000481453 UBIAD1Q9Y5Z9 338 aa20.33■□□□□ 0.85
MRPL28-209ENST00000481453 WDR90Q96KV7 1748 aa20.33■□□□□ 0.85
MRPL28-209ENST00000481453 PAPPA2Q9BXP8 1791 aa20.33■□□□□ 0.85
MRPL28-209ENST00000481453 DDNO94850 711 aaPredicted RBP20.33■□□□□ 0.84
MRPL28-209ENST00000481453 FDX1P10109 184 aa20.33■□□□□ 0.84
MRPL28-209ENST00000481453 OAS2P29728 719 aaKnown RBP20.33■□□□□ 0.84
MRPL28-209ENST00000481453 CASP5P51878 434 aa20.33■□□□□ 0.84
MRPL28-209ENST00000481453 RPS6P62753 249 aaKnown RBP20.33■□□□□ 0.84
MRPL28-209ENST00000481453 WHAMMP3Q1A5X7 153 aa20.33■□□□□ 0.84
MRPL28-209ENST00000481453 PCNX4Q63HM2 1172 aa20.33■□□□□ 0.84
MRPL28-209ENST00000481453 SAMD3Q8N6K7 520 aa20.33■□□□□ 0.84
MRPL28-209ENST00000481453 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.33■□□□□ 0.844e-8■■□□□ 12.7
MRPL28-209ENST00000481453 TRERF1Q96PN7 1200 aa20.33■□□□□ 0.84
MRPL28-209ENST00000481453 TAAR1Q96RJ0 339 aa20.33■□□□□ 0.84
MRPL28-209ENST00000481453 RIT2Q99578 217 aa20.33■□□□□ 0.84
MRPL28-209ENST00000481453 DNAJC7Q99615 494 aa20.33■□□□□ 0.84
MRPL28-209ENST00000481453 TTYH3Q9C0H2 523 aa20.33■□□□□ 0.84
MRPL28-209ENST00000481453 KCTD10Q9H3F6 313 aa20.33■□□□□ 0.84
MRPL28-209ENST00000481453 MAP3K20Q9NYL2 800 aaKnown RBP20.33■□□□□ 0.84
MRPL28-209ENST00000481453 CAPN11Q9UMQ6 739 aa20.33■□□□□ 0.84
MRPL28-209ENST00000481453 ADAMTS5Q9UNA0 930 aa20.33■□□□□ 0.84
MRPL28-209ENST00000481453 RIPK3Q9Y572 518 aa20.33■□□□□ 0.84
MRPL28-209ENST00000481453 CTAGE15A4D2H0 777 aa20.32■□□□□ 0.84
MRPL28-209ENST00000481453 ERICH4A6NGS2 130 aa20.32■□□□□ 0.84
MRPL28-209ENST00000481453 TFRCP02786 760 aaKnown RBP20.32■□□□□ 0.84
MRPL28-209ENST00000481453 CTAGE8P0CG41 777 aa20.32■□□□□ 0.84
MRPL28-209ENST00000481453 DLK2Q6UY11 383 aa20.32■□□□□ 0.84
MRPL28-209ENST00000481453 KRT26Q7Z3Y9 468 aa20.32■□□□□ 0.84
MRPL28-209ENST00000481453 CTAGE6Q86UF2 777 aa20.32■□□□□ 0.84
MRPL28-209ENST00000481453 SFR1Q86XK3 245 aa20.32■□□□□ 0.84
MRPL28-209ENST00000481453 TPH2Q8IWU9 490 aa20.32■□□□□ 0.84
MRPL28-209ENST00000481453 CTAGE4Q8IX94 777 aa20.32■□□□□ 0.84
MRPL28-209ENST00000481453 PIGOQ8TEQ8 1089 aa20.32■□□□□ 0.84
MRPL28-209ENST00000481453 TSG101Q99816 390 aa20.32■□□□□ 0.84
MRPL28-209ENST00000481453 BCAS3Q9H6U6 928 aa20.32■□□□□ 0.84
MRPL28-209ENST00000481453 KCNH7Q9NS40 1196 aa20.32■□□□□ 0.84
MRPL28-209ENST00000481453 GUCA1BQ9UMX6 200 aa20.32■□□□□ 0.84
MRPL28-209ENST00000481453 REXO2Q9Y3B8 237 aaKnown RBP20.32■□□□□ 0.84
MRPL28-209ENST00000481453 RSPH10B2B2RC85 870 aa20.31■□□□□ 0.84
MRPL28-209ENST00000481453 C19orf81C9J6K1 198 aa20.31■□□□□ 0.84
MRPL28-209ENST00000481453 RSPH10BP0C881 870 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms