RNA–Protein interactions for RNA: ENST00000480793.1

R3HDM1-214, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 235 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-214ENST00000480793 FBXL7Q9UJT9 491 aa3.34□□□□□ -1.87
R3HDM1-214ENST00000480793 PCDHB10Q9UN67 800 aa3.34□□□□□ -1.87
R3HDM1-214ENST00000480793 EMC9Q9Y3B6 208 aa3.34□□□□□ -1.87
R3HDM1-214ENST00000480793 NOP56O00567 594 aaKnown RBP3.33□□□□□ -1.88
R3HDM1-214ENST00000480793 ZNF16P17020 682 aaPredicted RBP3.33□□□□□ -1.88
R3HDM1-214ENST00000480793 KRTAP10-6P60371 365 aaPredicted RBP3.33□□□□□ -1.88
R3HDM1-214ENST00000480793 LSAMPQ13449 338 aa3.33□□□□□ -1.88
R3HDM1-214ENST00000480793 GTF2IRD2BQ6EKJ0 949 aa3.33□□□□□ -1.88
R3HDM1-214ENST00000480793 ZNF662Q6ZS27 426 aa3.33□□□□□ -1.88
R3HDM1-214ENST00000480793 GTF2IRD2Q86UP8 949 aa3.33□□□□□ -1.88
R3HDM1-214ENST00000480793 MICAL1Q8TDZ2 1067 aa3.33□□□□□ -1.88
R3HDM1-214ENST00000480793 HAS1Q92839 578 aa3.33□□□□□ -1.88
R3HDM1-214ENST00000480793 ESYT3A0FGR9 886 aa3.32□□□□□ -1.88
R3HDM1-214ENST00000480793 ANKRD34BA5PLL1 514 aa3.32□□□□□ -1.88
R3HDM1-214ENST00000480793 IKBKBO14920 756 aa3.32□□□□□ -1.88
R3HDM1-214ENST00000480793 FAHP16930 419 aa3.32□□□□□ -1.88
R3HDM1-214ENST00000480793 ERCC3P19447 782 aa3.32□□□□□ -1.88
R3HDM1-214ENST00000480793 ETV4P43268 484 aa3.32□□□□□ -1.88
R3HDM1-214ENST00000480793 SLC25A3Q00325 362 aa3.32□□□□□ -1.88
R3HDM1-214ENST00000480793 PFKPQ01813 784 aa3.32□□□□□ -1.88
R3HDM1-214ENST00000480793 CNGB1Q14028 1251 aaPredicted RBP3.32□□□□□ -1.88
R3HDM1-214ENST00000480793 PCOLCEQ15113 449 aa3.32□□□□□ -1.88
R3HDM1-214ENST00000480793 PAN2Q504Q3 1202 aaKnown RBP3.32□□□□□ -1.88
R3HDM1-214ENST00000480793 MRGPREQ86SM8 312 aa3.32□□□□□ -1.88
R3HDM1-214ENST00000480793 BVESQ8NE79 360 aa3.32□□□□□ -1.88
R3HDM1-214ENST00000480793 BCL2L13Q9BXK5 485 aa3.32□□□□□ -1.88
R3HDM1-214ENST00000480793 NKX2-4Q9H2Z4 354 aa3.32□□□□□ -1.88
R3HDM1-214ENST00000480793 PCDHA2Q9Y5H9 948 aa3.32□□□□□ -1.88
R3HDM1-214ENST00000480793 ZNF839A8K0R7 811 aa3.31□□□□□ -1.88
R3HDM1-214ENST00000480793 SLC27A2O14975 620 aa3.31□□□□□ -1.88
R3HDM1-214ENST00000480793 IL18BPO95998 194 aa3.31□□□□□ -1.88
R3HDM1-214ENST00000480793 NAT2P11245 290 aa3.31□□□□□ -1.88
R3HDM1-214ENST00000480793 TBR1Q16650 682 aa3.31□□□□□ -1.88
R3HDM1-214ENST00000480793 CD276Q5ZPR3 534 aa3.31□□□□□ -1.88
R3HDM1-214ENST00000480793 DPP8Q6V1X1 898 aaPredicted RBP3.31□□□□□ -1.88
R3HDM1-214ENST00000480793 CCDC103Q8IW40 242 aa3.31□□□□□ -1.88
R3HDM1-214ENST00000480793 TRIM59Q8IWR1 403 aa3.31□□□□□ -1.88
R3HDM1-214ENST00000480793 SYNE4Q8N205 404 aa3.31□□□□□ -1.88
R3HDM1-214ENST00000480793 KLHL6Q8WZ60 621 aa3.31□□□□□ -1.88
R3HDM1-214ENST00000480793 CFHR4Q92496 578 aa3.31□□□□□ -1.88
R3HDM1-214ENST00000480793 TMEM176AQ96HP8 235 aa3.31□□□□□ -1.88
R3HDM1-214ENST00000480793 CRBNQ96SW2 442 aa3.31□□□□□ -1.88
R3HDM1-214ENST00000480793 APEX2Q9UBZ4 518 aa3.31□□□□□ -1.88
R3HDM1-214ENST00000480793 PPT2Q9UMR5 302 aa3.31□□□□□ -1.88
R3HDM1-214ENST00000480793 TRAF5O00463 557 aa3.3□□□□□ -1.88
R3HDM1-214ENST00000480793 HMGCRP04035 888 aa3.3□□□□□ -1.88
R3HDM1-214ENST00000480793 PDE6AP16499 860 aa3.3□□□□□ -1.88
R3HDM1-214ENST00000480793 USP30Q70CQ3 517 aa3.3□□□□□ -1.88
R3HDM1-214ENST00000480793 ANKRD35Q8N283 1001 aa3.3□□□□□ -1.88
R3HDM1-214ENST00000480793 ZNF513Q8N8E2 541 aaPredicted RBP3.3□□□□□ -1.88
R3HDM1-214ENST00000480793 RCBTB1Q8NDN9 531 aa3.3□□□□□ -1.88
R3HDM1-214ENST00000480793 PPP1R14AQ96A00 147 aa3.3□□□□□ -1.88
R3HDM1-214ENST00000480793 MPHOSPH9Q99550 1183 aa3.3□□□□□ -1.88
R3HDM1-214ENST00000480793 APBA2Q99767 749 aa3.3□□□□□ -1.88
R3HDM1-214ENST00000480793 KIAA1683Q9H0B3 1180 aa3.3□□□□□ -1.88
R3HDM1-214ENST00000480793 SLC6A20Q9NP91 592 aa3.3□□□□□ -1.88
R3HDM1-214ENST00000480793 NUB1Q9Y5A7 615 aa3.3□□□□□ -1.88
R3HDM1-214ENST00000480793 POLR2AP24928 1970 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-214ENST00000480793 RECKO95980 971 aa3.29□□□□□ -1.88
R3HDM1-214ENST00000480793 LTBRP36941 435 aa3.29□□□□□ -1.88
R3HDM1-214ENST00000480793 MFAP1P55081 439 aaKnown RBP3.29□□□□□ -1.88
R3HDM1-214ENST00000480793 PTPAQ15257 358 aa3.29□□□□□ -1.88
R3HDM1-214ENST00000480793 WDR72Q3MJ13 1102 aa3.29□□□□□ -1.88
R3HDM1-214ENST00000480793 LY6G5CQ5SRR4 150 aa3.29□□□□□ -1.88
R3HDM1-214ENST00000480793 ACBD5Q5T8D3 534 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-214ENST00000480793 SPTY2D1Q68D10 685 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-214ENST00000480793 KIAA1211LQ6NV74 962 aa3.29□□□□□ -1.88
R3HDM1-214ENST00000480793 RD3Q7Z3Z2 195 aa3.29□□□□□ -1.88
R3HDM1-214ENST00000480793 VRK3Q8IV63 474 aa3.29□□□□□ -1.88
R3HDM1-214ENST00000480793 GPR135Q8IZ08 494 aa3.29□□□□□ -1.88
R3HDM1-214ENST00000480793 SLC25A43Q8WUT9 341 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-214ENST00000480793 CLEC4DQ8WXI8 215 aa3.29□□□□□ -1.88
R3HDM1-214ENST00000480793 HECAQ9UBI9 543 aaPredicted RBP3.29□□□□□ -1.88
R3HDM1-214ENST00000480793 COX11Q9Y6N1 276 aa3.29□□□□□ -1.88
R3HDM1-214ENST00000480793 ITGAVP06756 1048 aa3.28□□□□□ -1.88
R3HDM1-214ENST00000480793 SNRPB2P08579 225 aaKnown RBP3.28□□□□□ -1.88
R3HDM1-214ENST00000480793 ECI1P42126 302 aa3.28□□□□□ -1.88
R3HDM1-214ENST00000480793 RACK1P63244 317 aaKnown RBP3.28□□□□□ -1.88
R3HDM1-214ENST00000480793 FANCCQ00597 558 aa3.28□□□□□ -1.88
R3HDM1-214ENST00000480793 CYP4F3Q08477 520 aa3.28□□□□□ -1.88
R3HDM1-214ENST00000480793 TUSC3Q13454 348 aa3.28□□□□□ -1.88
R3HDM1-214ENST00000480793 LCE1AQ5T7P2 110 aa3.28□□□□□ -1.88
R3HDM1-214ENST00000480793 TMCO4Q5TGY1 634 aa3.28□□□□□ -1.88
R3HDM1-214ENST00000480793 PPIL6Q8IXY8 311 aa3.28□□□□□ -1.88
R3HDM1-214ENST00000480793 C19orf47Q8N9M1 422 aaKnown RBP3.28□□□□□ -1.88
R3HDM1-214ENST00000480793 SHCBP1Q8NEM2 672 aa3.28□□□□□ -1.88
R3HDM1-214ENST00000480793 PIP4K2CQ8TBX8 421 aa3.28□□□□□ -1.88
R3HDM1-214ENST00000480793 PROKR1Q8TCW9 393 aa3.28□□□□□ -1.88
R3HDM1-214ENST00000480793 LENG9Q96B70 501 aa3.28□□□□□ -1.88
R3HDM1-214ENST00000480793 BACH2Q9BYV9 841 aa3.28□□□□□ -1.88
R3HDM1-214ENST00000480793 ZDHHC5Q9C0B5 715 aa3.28□□□□□ -1.88
R3HDM1-214ENST00000480793 PDGFDQ9GZP0 370 aaPredicted RBP3.28□□□□□ -1.88
R3HDM1-214ENST00000480793 SETD1BQ9UPS6 1966 aaKnown RBP3.28□□□□□ -1.88
R3HDM1-214ENST00000480793 SPATA31A6Q5VVP1 1343 aa3.27□□□□□ -1.89
R3HDM1-214ENST00000480793 A0A1W2PQH9 124 aa3.27□□□□□ -1.89
R3HDM1-214ENST00000480793 UNCXA6NJT0 531 aa3.27□□□□□ -1.89
R3HDM1-214ENST00000480793 KIAA0355O15063 1070 aa3.27□□□□□ -1.89
R3HDM1-214ENST00000480793 SLC26A4O43511 780 aa3.27□□□□□ -1.89
R3HDM1-214ENST00000480793 PPFIA4O75335 1185 aa3.27□□□□□ -1.89
R3HDM1-214ENST00000480793 LCP1P13796 627 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms