RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 SETD4Q9NVD3 440 aa14.02□□□□□ -0.17
USP11-208ENST00000480104 HCSTQ9UBK5 93 aa14.02□□□□□ -0.17
USP11-208ENST00000480104 WNT16Q9UBV4 365 aa14.02□□□□□ -0.17
USP11-208ENST00000480104 SUPT16HQ9Y5B9 1047 aaKnown RBP14.02□□□□□ -0.17
USP11-208ENST00000480104 MRVI1Q9Y6F6 885 aa14.02□□□□□ -0.17
USP11-208ENST00000480104 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.02□□□□□ -0.17
USP11-208ENST00000480104 IGSF10Q6WRI0 2623 aa14.02□□□□□ -0.17
USP11-208ENST00000480104 RARSP54136 660 aaKnown RBP14.01□□□□□ -0.17
USP11-208ENST00000480104 STXBP2Q15833 593 aa14.01□□□□□ -0.17
USP11-208ENST00000480104 PUS7LQ9H0K6 701 aaKnown RBP14.01□□□□□ -0.17
USP11-208ENST00000480104 EPC1Q9H2F5 836 aa14.01□□□□□ -0.17
USP11-208ENST00000480104 SIT1Q9Y3P8 196 aa14.01□□□□□ -0.17
USP11-208ENST00000480104 LAMA5O15230 3695 aa14.01□□□□□ -0.17
USP11-208ENST00000480104 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14□□□□□ -0.17
USP11-208ENST00000480104 GSG1L2A8MUP6 293 aa14□□□□□ -0.17
USP11-208ENST00000480104 C1QTNF9BB2RNN3 333 aa14□□□□□ -0.17
USP11-208ENST00000480104 H3BRB1 525 aa14□□□□□ -0.17
USP11-208ENST00000480104 C1QTNF9P0C862 333 aa14□□□□□ -0.17
USP11-208ENST00000480104 GLULP15104 373 aa14□□□□□ -0.17
USP11-208ENST00000480104 MGAT3Q09327 533 aa14□□□□□ -0.17
USP11-208ENST00000480104 N4BP2L1Q5TBK1 243 aaPredicted RBP14□□□□□ -0.17
USP11-208ENST00000480104 MYSM1Q5VVJ2 828 aa14□□□□□ -0.17
USP11-208ENST00000480104 LRSAM1Q6UWE0 723 aa14□□□□□ -0.17
USP11-208ENST00000480104 RTN4RL1Q86UN2 441 aaPredicted RBP14□□□□□ -0.17
USP11-208ENST00000480104 FEZF2Q8TBJ5 459 aa14□□□□□ -0.17
USP11-208ENST00000480104 ATRIPQ8WXE1 791 aa14□□□□□ -0.17
USP11-208ENST00000480104 ACSF2Q96CM8 615 aaPredicted RBP14□□□□□ -0.17
USP11-208ENST00000480104 TUT1Q9H6E5 874 aaKnown RBP14□□□□□ -0.17
USP11-208ENST00000480104 ZNF287Q9HBT7 754 aa14□□□□□ -0.17
USP11-208ENST00000480104 MRS2Q9HD23 443 aa14□□□□□ -0.17
USP11-208ENST00000480104 STX8Q9UNK0 236 aa14□□□□□ -0.17
USP11-208ENST00000480104 PCDHGA2Q9Y5H1 932 aa14□□□□□ -0.17
USP11-208ENST00000480104 AKAP13Q12802 2813 aa14□□□□□ -0.17
USP11-208ENST00000480104 MYH7BA7E2Y1 1941 aa14□□□□□ -0.17
USP11-208ENST00000480104 STAG3L1P0CL83 205 aa13.99□□□□□ -0.17
USP11-208ENST00000480104 GNAT1P11488 350 aa13.99□□□□□ -0.17
USP11-208ENST00000480104 IBSPP21815 317 aaPredicted RBP13.99□□□□□ -0.17
USP11-208ENST00000480104 ATP8B2P98198 1209 aa13.99□□□□□ -0.17
USP11-208ENST00000480104 UBE3CQ15386 1083 aa13.99□□□□□ -0.17
USP11-208ENST00000480104 ZNF528Q3MIS6 628 aa13.99□□□□□ -0.17
USP11-208ENST00000480104 FBXO47Q5MNV8 452 aa13.99□□□□□ -0.17
USP11-208ENST00000480104 ATAT1Q5SQI0 421 aa13.99□□□□□ -0.17
USP11-208ENST00000480104 BTNL9Q6UXG8 535 aa13.99□□□□□ -0.17
USP11-208ENST00000480104 COLGALT1Q8NBJ5 622 aa13.99□□□□□ -0.17
USP11-208ENST00000480104 TAAR1Q96RJ0 339 aa13.99□□□□□ -0.17
USP11-208ENST00000480104 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.99□□□□□ -0.17
USP11-208ENST00000480104 PAG1Q9NWQ8 432 aa13.99□□□□□ -0.17
USP11-208ENST00000480104 COL20A1Q9P218 1284 aa13.99□□□□□ -0.17
USP11-208ENST00000480104 LHX6Q9UPM6 363 aa13.99□□□□□ -0.17
USP11-208ENST00000480104 LZTS1Q9Y250 596 aa13.99□□□□□ -0.17
USP11-208ENST00000480104 LRRN2O75325 713 aa13.98□□□□□ -0.17
USP11-208ENST00000480104 GGPS1O95749 300 aa13.98□□□□□ -0.17
USP11-208ENST00000480104 LGALS2P05162 132 aa13.98□□□□□ -0.17
USP11-208ENST00000480104 SCG2P13521 617 aa13.98□□□□□ -0.17
USP11-208ENST00000480104 CD52P31358 61 aa13.98□□□□□ -0.17
USP11-208ENST00000480104 ARHGAP4P98171 946 aa13.98□□□□□ -0.17
USP11-208ENST00000480104 TFAP4Q01664 338 aa13.98□□□□□ -0.17
USP11-208ENST00000480104 RING1Q06587 406 aa13.98□□□□□ -0.17
USP11-208ENST00000480104 SPEM2Q0P670 501 aa13.98□□□□□ -0.17
USP11-208ENST00000480104 CELF3Q5SZQ8 465 aaKnown RBP13.98□□□□□ -0.17
USP11-208ENST00000480104 PHLDB3Q6NSJ2 640 aa13.98□□□□□ -0.17
USP11-208ENST00000480104 UNQ6494/PRO21346Q6UXR6 183 aa13.98□□□□□ -0.17
USP11-208ENST00000480104 RUFY4Q6ZNE9 571 aa13.98□□□□□ -0.17
USP11-208ENST00000480104 TSHZ1Q6ZSZ6 1077 aa13.98□□□□□ -0.17
USP11-208ENST00000480104 OTOP3Q7RTS5 596 aa13.98□□□□□ -0.17
USP11-208ENST00000480104 NSUN6Q8TEA1 469 aaKnown RBP13.98□□□□□ -0.17
USP11-208ENST00000480104 LMBR1Q8WVP7 490 aa13.98□□□□□ -0.17
USP11-208ENST00000480104 MRPS27Q92552 414 aaKnown RBP13.98□□□□□ -0.17
USP11-208ENST00000480104 BORCS6Q96GS4 357 aa13.98□□□□□ -0.17
USP11-208ENST00000480104 AGO3Q9H9G7 860 aaKnown RBP13.98□□□□□ -0.17
USP11-208ENST00000480104 EPB41L4AQ9HCS5 686 aaPredicted RBP13.98□□□□□ -0.17
USP11-208ENST00000480104 NGRNQ9NPE2 291 aaKnown RBP13.98□□□□□ -0.17
USP11-208ENST00000480104 GMEB2Q9UKD1 530 aa13.98□□□□□ -0.17
USP11-208ENST00000480104 FREM2Q5SZK8 3169 aa13.97□□□□□ -0.17
USP11-208ENST00000480104 ADAM17P78536 824 aa13.97□□□□□ -0.17
USP11-208ENST00000480104 GIMAP6Q6P9H5 292 aa13.97□□□□□ -0.17
USP11-208ENST00000480104 CCDC149Q6ZUS6 474 aa13.97□□□□□ -0.17
USP11-208ENST00000480104 SYTL5Q8TDW5 730 aaPredicted RBP13.97□□□□□ -0.17
USP11-208ENST00000480104 DCAF4Q8WV16 495 aa13.97□□□□□ -0.17
USP11-208ENST00000480104 RSAD2Q8WXG1 361 aa13.97□□□□□ -0.17
USP11-208ENST00000480104 STRBPQ96SI9 672 aaKnown RBP13.97□□□□□ -0.17
USP11-208ENST00000480104 IWS1Q96ST2 819 aa13.97□□□□□ -0.17
USP11-208ENST00000480104 FOXQ1Q9C009 403 aa13.97□□□□□ -0.17
USP11-208ENST00000480104 C1orf115Q9H7X2 142 aa13.97□□□□□ -0.17
USP11-208ENST00000480104 IL1RAPL2Q9NP60 686 aa13.97□□□□□ -0.17
USP11-208ENST00000480104 FBXO4Q9UKT5 387 aa13.97□□□□□ -0.17
USP11-208ENST00000480104 LRFN2Q9ULH4 789 aa13.97□□□□□ -0.17
USP11-208ENST00000480104 TNNQ9UQP3 1299 aa13.97□□□□□ -0.17
USP11-208ENST00000480104 KIAA1217Q5T5P2 1943 aa13.97□□□□□ -0.17
USP11-208ENST00000480104 FRMPD2Q68DX3 1309 aaPredicted RBP13.96□□□□□ -0.17
USP11-208ENST00000480104 WDR19Q8NEZ3 1342 aa13.96□□□□□ -0.17
USP11-208ENST00000480104 DENND4AQ7Z401 1863 aa13.96□□□□□ -0.17
USP11-208ENST00000480104 TBKBP1A7MCY6 615 aa13.96□□□□□ -0.17
USP11-208ENST00000480104 NMT2O60551 498 aa13.96□□□□□ -0.17
USP11-208ENST00000480104 CLASP2O75122 1294 aaKnown RBP13.96□□□□□ -0.17
USP11-208ENST00000480104 EIF3JO75822 258 aaKnown RBP13.96□□□□□ -0.17
USP11-208ENST00000480104 EIF2AK2P19525 551 aaKnown RBP13.96□□□□□ -0.17
USP11-208ENST00000480104 CSTF1Q05048 431 aaKnown RBP13.96□□□□□ -0.17
USP11-208ENST00000480104 USH1GQ495M9 461 aa13.96□□□□□ -0.17
USP11-208ENST00000480104 TMC7Q7Z402 723 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms