RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 KRT40Q6A162 431 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 SPATA2LQ8IUW3 424 aaPredicted RBP9.63□□□□□ -0.87
TTC3-216ENST00000479930 ICA1LQ8NDH6 482 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 VWA3AA6NCI4 1184 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 SLC16A2P36021 539 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 YWHAGP61981 247 aaKnown RBP eCLIP9.63□□□□□ -0.87
TTC3-216ENST00000479930 MED21Q13503 144 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 TAF1CQ15572 869 aaPredicted RBP9.63□□□□□ -0.87
TTC3-216ENST00000479930 PAN2Q504Q3 1202 aaKnown RBP9.63□□□□□ -0.87
TTC3-216ENST00000479930 BEND3Q5T5X7 828 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 RFWD2Q8NHY2 731 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 SNX29Q8TEQ0 813 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 UNC45AQ9H3U1 944 aa9.63□□□□□ -0.87
TTC3-216ENST00000479930 CYP7B1O75881 506 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 NCAM1P13591 858 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 GRIK1P39086 918 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 TFAMQ00059 246 aaKnown RBP9.62□□□□□ -0.87
TTC3-216ENST00000479930 LMNTD2Q8IXW0 634 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 MPOP05164 745 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 EEF1DP29692 281 aaKnown RBP9.62□□□□□ -0.87
TTC3-216ENST00000479930 CYP27A1Q02318 531 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 SCARA5Q6ZMJ2 495 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 PARVGQ9HBI0 331 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 IFNKQ9P0W0 207 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 TDP2O95551 362 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 GPATCH4Q5T3I0 446 aaKnown RBP9.62□□□□□ -0.87
TTC3-216ENST00000479930 PRR23BQ6ZRT6 265 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 MTSS1LQ765P7 747 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 FOXP3Q9BZS1 431 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 BICC1Q9H694 974 aaKnown RBP9.62□□□□□ -0.87
TTC3-216ENST00000479930 RBM7Q9Y580 266 aaKnown RBP9.62□□□□□ -0.87
TTC3-216ENST00000479930 IQCA1LA6NCM1 817 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 CD2BP2O95400 341 aaKnown RBP9.62□□□□□ -0.87
TTC3-216ENST00000479930 SOAT1P35610 550 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 SPACA6W5XKT8 324 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 CHURC1-FNTBB4DL54 471 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 ESRRGP62508 458 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 SCAIQ8N9R8 606 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 RABGGTAQ92696 567 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 TRIT1Q9H3H1 467 aaKnown RBP9.62□□□□□ -0.87
TTC3-216ENST00000479930 TXLNGQ9NUQ3 528 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 TECP42680 631 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 PDX1P52945 283 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 TP53BP2Q13625 1128 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 CENPPQ6IPU0 288 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 KLC3Q6P597 504 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 FAM161BQ96MY7 647 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 SGK1O00141 431 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 MZF1P28698 734 aaPredicted RBP9.62□□□□□ -0.87
TTC3-216ENST00000479930 ELK3P41970 407 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 ANKRD20A4Q4UJ75 823 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 ANKRD20A8PQ5CZ79 823 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 ANKRD20A2Q5SQ80 823 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 ANKRD20A1Q5TYW2 823 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 ARHGEF18Q6ZSZ5 1173 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 TREML1Q86YW5 311 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 BBS7Q8IWZ6 715 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 REXO5Q96IC2 774 aaKnown RBP9.62□□□□□ -0.87
TTC3-216ENST00000479930 MPP4Q96JB8 637 aa9.62□□□□□ -0.87
TTC3-216ENST00000479930 K7ELQ4 463 aaPredicted RBP9.61□□□□□ -0.87
TTC3-216ENST00000479930 MCCD1P59942 119 aaPredicted RBP9.61□□□□□ -0.87
TTC3-216ENST00000479930 SMU1Q2TAY7 513 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 VWA3BQ502W6 1294 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 TNIP3Q96KP6 325 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 FSD1LQ9BXM9 530 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 PCDHGB3Q9Y5G1 929 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 SRSF11Q05519 484 aaKnown RBP9.61□□□□□ -0.87
TTC3-216ENST00000479930 PWP1Q13610 501 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 AHI1Q8N157 1196 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 TUBGCP3Q96CW5 907 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 MEIS1O00470 390 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 FOSL2P15408 326 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 GJB2P29033 226 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 PBLDP30039 288 aaPredicted RBP9.61□□□□□ -0.87
TTC3-216ENST00000479930 SF3B3Q15393 1217 aaKnown RBP9.61□□□□□ -0.87
TTC3-216ENST00000479930 C12orf50Q8NA57 414 aaPredicted RBP9.61□□□□□ -0.87
TTC3-216ENST00000479930 XAGE3Q8WTP9 111 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 CCDC127Q96BQ5 260 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 KDM4CQ9H3R0 1056 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 RNF123Q5XPI4 1314 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 VPS4BO75351 444 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 ADCY5O95622 1261 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 PHACTR4Q8IZ21 702 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 SEPT5Q99719 369 aaPredicted RBP9.61□□□□□ -0.87
TTC3-216ENST00000479930 TMEM154Q6P9G4 183 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 POTEEQ6S8J3 1075 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 MAP7D3Q8IWC1 876 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 SPICE1Q8N0Z3 855 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 AGGF1Q8N302 714 aaeCLIP9.61□□□□□ -0.873e-6■□□□□ 11.1
TTC3-216ENST00000479930 RAPGEF5Q92565 580 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 FAF1Q9UNN5 650 aaPredicted RBP9.61□□□□□ -0.87
TTC3-216ENST00000479930 RIPOR2Q9Y4F9 1068 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 RASGRF2O14827 1237 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 PRODHO43272 600 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 PDE6CP51160 858 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 MYL7Q01449 175 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 ALDH6A1Q02252 535 aaKnown RBP9.61□□□□□ -0.87
TTC3-216ENST00000479930 ATG16L1Q676U5 607 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 NRSN1Q8IZ57 195 aa9.61□□□□□ -0.87
TTC3-216ENST00000479930 RMDN1Q96DB5 314 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms