RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 TUBE1Q9UJT0 475 aa15.27■□□□□ 0.04
ABCF1-206ENST00000479542 TAF6LQ9Y6J9 622 aa15.27■□□□□ 0.04
ABCF1-206ENST00000479542 PIEZO1Q92508 2521 aa15.26■□□□□ 0.03
ABCF1-206ENST00000479542 KDM3AQ9Y4C1 1321 aa15.26■□□□□ 0.03
ABCF1-206ENST00000479542 DCXO43602 365 aa15.26■□□□□ 0.03
ABCF1-206ENST00000479542 LTBRP36941 435 aa15.26■□□□□ 0.03
ABCF1-206ENST00000479542 IRX6P78412 446 aaPredicted RBP15.26■□□□□ 0.03
ABCF1-206ENST00000479542 ZP2Q05996 745 aa15.26■□□□□ 0.03
ABCF1-206ENST00000479542 MTMR1Q13613 665 aa15.26■□□□□ 0.03
ABCF1-206ENST00000479542 SMAD2Q15796 467 aaKnown RBP15.26■□□□□ 0.03
ABCF1-206ENST00000479542 GRIK4Q16099 956 aa15.26■□□□□ 0.03
ABCF1-206ENST00000479542 IER5Q5VY09 327 aa15.26■□□□□ 0.03
ABCF1-206ENST00000479542 SGMS1Q86VZ5 419 aa15.26■□□□□ 0.03
ABCF1-206ENST00000479542 NME8Q8N427 588 aa15.26■□□□□ 0.03
ABCF1-206ENST00000479542 POP1Q99575 1024 aaKnown RBP15.26■□□□□ 0.03
ABCF1-206ENST00000479542 RBM8AQ9Y5S9 174 aaKnown RBP15.26■□□□□ 0.03
ABCF1-206ENST00000479542 NLRC5Q86WI3 1866 aa15.26■□□□□ 0.03
ABCF1-206ENST00000479542 NFASCO94856 1347 aa15.25■□□□□ 0.03
ABCF1-206ENST00000479542 SH2B2O14492 632 aaPredicted RBP15.25■□□□□ 0.03
ABCF1-206ENST00000479542 MMP1P03956 469 aa15.25■□□□□ 0.03
ABCF1-206ENST00000479542 GHRP10912 638 aa15.25■□□□□ 0.03
ABCF1-206ENST00000479542 SSTR3P32745 418 aaPredicted RBP15.25■□□□□ 0.03
ABCF1-206ENST00000479542 CTNNB1P35222 781 aa15.25■□□□□ 0.03
ABCF1-206ENST00000479542 SLC26A2P50443 739 aa15.25■□□□□ 0.03
ABCF1-206ENST00000479542 RUFY4Q6ZNE9 571 aa15.25■□□□□ 0.03
ABCF1-206ENST00000479542 PLPPR4Q7Z2D5 763 aa15.25■□□□□ 0.03
ABCF1-206ENST00000479542 CMTR2Q8IYT2 770 aaKnown RBP15.25■□□□□ 0.03
ABCF1-206ENST00000479542 TELO2Q9Y4R8 837 aa15.25■□□□□ 0.03
ABCF1-206ENST00000479542 PCDHA2Q9Y5H9 948 aa15.25■□□□□ 0.03
ABCF1-206ENST00000479542 MYO7AQ13402 2215 aa15.24■□□□□ 0.03
ABCF1-206ENST00000479542 CCDC69A6NI79 296 aa15.24■□□□□ 0.03
ABCF1-206ENST00000479542 SPDYE3A6NKU9 549 aa15.24■□□□□ 0.03
ABCF1-206ENST00000479542 H3BQ06 376 aaPredicted RBP15.24■□□□□ 0.03
ABCF1-206ENST00000479542 PRC1O43663 620 aa15.24■□□□□ 0.03
ABCF1-206ENST00000479542 ATG7O95352 703 aa15.24■□□□□ 0.03
ABCF1-206ENST00000479542 FOSP01100 380 aaPredicted RBP15.24■□□□□ 0.03
ABCF1-206ENST00000479542 MRPS6P82932 125 aaKnown RBP15.24■□□□□ 0.03
ABCF1-206ENST00000479542 NPAS4Q8IUM7 802 aa15.24■□□□□ 0.03
ABCF1-206ENST00000479542 FANCBQ8NB91 859 aa15.24■□□□□ 0.03
ABCF1-206ENST00000479542 DNAJB3Q8WWF6 145 aa15.24■□□□□ 0.03
ABCF1-206ENST00000479542 GLG1Q92896 1179 aa15.24■□□□□ 0.03
ABCF1-206ENST00000479542 PPP2R3CQ969Q6 453 aa15.24■□□□□ 0.03
ABCF1-206ENST00000479542 RNF216Q9NWF9 866 aaPredicted RBP15.24■□□□□ 0.03
ABCF1-206ENST00000479542 PCDHA6Q9UN73 950 aa15.24■□□□□ 0.03
ABCF1-206ENST00000479542 PCDHA8Q9Y5H6 950 aa15.24■□□□□ 0.03
ABCF1-206ENST00000479542 CDY2AQ9Y6F7 541 aa15.24■□□□□ 0.03
ABCF1-206ENST00000479542 MUC6Q6W4X9 2439 aa15.24■□□□□ 0.03
ABCF1-206ENST00000479542 DOCK5Q9H7D0 1870 aa15.23■□□□□ 0.03
ABCF1-206ENST00000479542 SMIM35A0A1B0GVV1 85 aa15.23■□□□□ 0.03
ABCF1-206ENST00000479542 GRM6O15303 877 aa15.23■□□□□ 0.03
ABCF1-206ENST00000479542 PLEKHA8P1O95397 391 aa15.23■□□□□ 0.03
ABCF1-206ENST00000479542 EYA4O95677 639 aa15.23■□□□□ 0.03
ABCF1-206ENST00000479542 STAG3L1P0CL83 205 aa15.23■□□□□ 0.03
ABCF1-206ENST00000479542 INSRRP14616 1297 aa15.23■□□□□ 0.03
ABCF1-206ENST00000479542 HYAL1Q12794 435 aa15.23■□□□□ 0.03
ABCF1-206ENST00000479542 ADAM15Q13444 863 aa15.23■□□□□ 0.03
ABCF1-206ENST00000479542 BTG3Q14201 252 aaPredicted RBP15.23■□□□□ 0.03
ABCF1-206ENST00000479542 NECTIN1Q15223 517 aa15.23■□□□□ 0.03
ABCF1-206ENST00000479542 RTN4RL1Q86UN2 441 aaPredicted RBP15.23■□□□□ 0.03
ABCF1-206ENST00000479542 PCYT2Q99447 389 aa15.23■□□□□ 0.03
ABCF1-206ENST00000479542 MXRA8Q9BRK3 442 aa15.23■□□□□ 0.03
ABCF1-206ENST00000479542 GLT8D2Q9H1C3 349 aa15.23■□□□□ 0.03
ABCF1-206ENST00000479542 AZI2Q9H6S1 392 aa15.23■□□□□ 0.03
ABCF1-206ENST00000479542 JPH1Q9HDC5 661 aaPredicted RBP15.23■□□□□ 0.03
ABCF1-206ENST00000479542 KCNH7Q9NS40 1196 aa15.23■□□□□ 0.03
ABCF1-206ENST00000479542 CLDND1Q9NY35 253 aa15.23■□□□□ 0.03
ABCF1-206ENST00000479542 SLC9A2Q9UBY0 812 aa15.23■□□□□ 0.03
ABCF1-206ENST00000479542 PLAGL2Q9UPG8 496 aa15.23■□□□□ 0.03
ABCF1-206ENST00000479542 IGSF9BQ9UPX0 1349 aa15.22■□□□□ 0.03
ABCF1-206ENST00000479542 IGKV6D-21A0A0A0MT36 114 aa15.22■□□□□ 0.03
ABCF1-206ENST00000479542 FSD2A1L4K1 749 aa15.22■□□□□ 0.03
ABCF1-206ENST00000479542 hCG_1984214I3L0E3 225 aa15.22■□□□□ 0.03
ABCF1-206ENST00000479542 MBTPS2O43462 519 aa15.22■□□□□ 0.03
ABCF1-206ENST00000479542 SP4Q02446 784 aa15.22■□□□□ 0.03
ABCF1-206ENST00000479542 SMAD4Q13485 552 aaKnown RBP15.22■□□□□ 0.03
ABCF1-206ENST00000479542 CAMK1Q14012 370 aa15.22■□□□□ 0.03
ABCF1-206ENST00000479542 HERC4Q5GLZ8 1057 aaPredicted RBP15.22■□□□□ 0.03
ABCF1-206ENST00000479542 PPP1R18Q6NYC8 613 aa15.22■□□□□ 0.03
ABCF1-206ENST00000479542 TMTC3Q6ZXV5 915 aa15.22■□□□□ 0.03
ABCF1-206ENST00000479542 NIPA1Q7RTP0 329 aa15.22■□□□□ 0.03
ABCF1-206ENST00000479542 ZNF713Q8N859 430 aaPredicted RBP15.22■□□□□ 0.03
ABCF1-206ENST00000479542 PIBF1Q8WXW3 757 aa15.22■□□□□ 0.03
ABCF1-206ENST00000479542 MYL10Q9BUA6 226 aa15.22■□□□□ 0.03
ABCF1-206ENST00000479542 LSG1Q9H089 658 aaKnown RBP15.22■□□□□ 0.03
ABCF1-206ENST00000479542 AGO3Q9H9G7 860 aaKnown RBP15.22■□□□□ 0.03
ABCF1-206ENST00000479542 TRPV2Q9Y5S1 764 aa15.22■□□□□ 0.03
ABCF1-206ENST00000479542 SLC12A7Q9Y666 1083 aa15.22■□□□□ 0.03
ABCF1-206ENST00000479542 FAM86C2PA6NEL3 165 aa15.21■□□□□ 0.03
ABCF1-206ENST00000479542 M0QZ92 97 aa15.21■□□□□ 0.03
ABCF1-206ENST00000479542 STAT5BP51692 787 aa15.21■□□□□ 0.03
ABCF1-206ENST00000479542 UBE3AQ05086 875 aa15.21■□□□□ 0.03
ABCF1-206ENST00000479542 CSPP1Q1MSJ5 1256 aa15.21■□□□□ 0.03
ABCF1-206ENST00000479542 ODR4Q5SWX8 454 aa15.21■□□□□ 0.03
ABCF1-206ENST00000479542 NFXL1Q6ZNB6 911 aa15.21■□□□□ 0.03
ABCF1-206ENST00000479542 SPPL3Q8TCT6 385 aa15.21■□□□□ 0.03
ABCF1-206ENST00000479542 MSLNLQ96KJ4 702 aa15.21■□□□□ 0.03
ABCF1-206ENST00000479542 SDF4Q9BRK5 362 aa15.21■□□□□ 0.03
ABCF1-206ENST00000479542 CELF4Q9BZC1 486 aaKnown RBP15.21■□□□□ 0.03
ABCF1-206ENST00000479542 RIC8AQ9NPQ8 531 aa15.21■□□□□ 0.03
ABCF1-206ENST00000479542 RBM28Q9NW13 759 aaKnown RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms