RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 FPGSQ05932 587 aa17.49■□□□□ 0.39
C9orf3-217ENST00000479161 PPIGQ13427 754 aaKnown RBP eCLIP17.49■□□□□ 0.392e-8■□□□□ 10.5
C9orf3-217ENST00000479161 EARS2Q5JPH6 523 aaKnown RBP17.49■□□□□ 0.39
C9orf3-217ENST00000479161 UTP14CQ5TAP6 766 aaKnown RBP17.49■□□□□ 0.39
C9orf3-217ENST00000479161 LRCH2Q5VUJ6 765 aa17.49■□□□□ 0.39
C9orf3-217ENST00000479161 SLFN12Q8IYM2 578 aa17.49■□□□□ 0.39
C9orf3-217ENST00000479161 TDHQ8IZJ6 230 aa17.49■□□□□ 0.39
C9orf3-217ENST00000479161 TEKT3Q9BXF9 490 aa17.49■□□□□ 0.39
C9orf3-217ENST00000479161 UBE2OQ9C0C9 1292 aaKnown RBP17.49■□□□□ 0.39
C9orf3-217ENST00000479161 NOD1Q9Y239 953 aa17.49■□□□□ 0.39
C9orf3-217ENST00000479161 TANC1Q9C0D5 1861 aa17.48■□□□□ 0.39
C9orf3-217ENST00000479161 MBLAC1A4D2B0 266 aaPredicted RBP17.48■□□□□ 0.39
C9orf3-217ENST00000479161 CCNT1O60563 726 aaKnown RBP17.48■□□□□ 0.39
C9orf3-217ENST00000479161 DTNBO60941 627 aa17.48■□□□□ 0.39
C9orf3-217ENST00000479161 PSAPP07602 524 aa17.48■□□□□ 0.39
C9orf3-217ENST00000479161 PPP2R5CQ13362 524 aa17.48■□□□□ 0.39
C9orf3-217ENST00000479161 TRIM50Q86XT4 487 aa17.48■□□□□ 0.39
C9orf3-217ENST00000479161 RPUSD2Q8IZ73 545 aaKnown RBP17.48■□□□□ 0.39
C9orf3-217ENST00000479161 LAMA3Q16787 3333 aa17.47■□□□□ 0.39
C9orf3-217ENST00000479161 SLC37A4O43826 429 aa17.47■□□□□ 0.39
C9orf3-217ENST00000479161 HBP1O60381 514 aa17.47■□□□□ 0.39
C9orf3-217ENST00000479161 CYP2C9P11712 490 aa17.47■□□□□ 0.39
C9orf3-217ENST00000479161 TRIM71Q2Q1W2 868 aaKnown RBP17.47■□□□□ 0.39
C9orf3-217ENST00000479161 LRIT3Q3SXY7 679 aa17.47■□□□□ 0.39
C9orf3-217ENST00000479161 HABP4Q5JVS0 413 aaKnown RBP17.47■□□□□ 0.39
C9orf3-217ENST00000479161 TAF2Q6P1X5 1199 aa17.47■□□□□ 0.39
C9orf3-217ENST00000479161 FAM43BQ6ZT52 329 aaPredicted RBP17.47■□□□□ 0.39
C9orf3-217ENST00000479161 NOSTRINQ8IVI9 506 aa17.47■□□□□ 0.39
C9orf3-217ENST00000479161 RETREG2Q8NC44 543 aa17.47■□□□□ 0.39
C9orf3-217ENST00000479161 ATP6V0A1Q93050 837 aa17.47■□□□□ 0.39
C9orf3-217ENST00000479161 ZNF302Q9NR11 478 aa17.47■□□□□ 0.39
C9orf3-217ENST00000479161 DISC1Q9NRI5 854 aa17.47■□□□□ 0.39
C9orf3-217ENST00000479161 SMC3Q9UQE7 1217 aa17.47■□□□□ 0.39
C9orf3-217ENST00000479161 COL1A2P08123 1366 aa17.47■□□□□ 0.39
C9orf3-217ENST00000479161 BAG4O95429 457 aaKnown RBP17.46■□□□□ 0.39
C9orf3-217ENST00000479161 IQCF3P0C7M6 154 aa17.46■□□□□ 0.39
C9orf3-217ENST00000479161 GJB2P29033 226 aa17.46■□□□□ 0.39
C9orf3-217ENST00000479161 CYP2C18P33260 490 aa17.46■□□□□ 0.39
C9orf3-217ENST00000479161 HIC1Q14526 733 aa17.46■□□□□ 0.39
C9orf3-217ENST00000479161 PLCB4Q15147 1175 aa17.46■□□□□ 0.39
C9orf3-217ENST00000479161 CCDC60Q8IWA6 550 aaPredicted RBP17.46■□□□□ 0.39
C9orf3-217ENST00000479161 ATP8B4Q8TF62 1192 aa17.46■□□□□ 0.39
C9orf3-217ENST00000479161 LMBR1Q8WVP7 490 aa17.46■□□□□ 0.39
C9orf3-217ENST00000479161 BBXQ8WY36 941 aaPredicted RBP17.46■□□□□ 0.39
C9orf3-217ENST00000479161 HAS1Q92839 578 aa17.46■□□□□ 0.39
C9orf3-217ENST00000479161 FAM167AQ96KS9 214 aa17.46■□□□□ 0.39
C9orf3-217ENST00000479161 WNT8AQ9H1J5 351 aa17.46■□□□□ 0.39
C9orf3-217ENST00000479161 IL23AQ9NPF7 189 aa17.46■□□□□ 0.39
C9orf3-217ENST00000479161 IGSF9BQ9UPX0 1349 aa17.46■□□□□ 0.38
C9orf3-217ENST00000479161 POTEB3A0JP26 581 aa17.45■□□□□ 0.38
C9orf3-217ENST00000479161 K7ELQ4 463 aaPredicted RBP17.45■□□□□ 0.38
C9orf3-217ENST00000479161 BACH1O14867 736 aa17.45■□□□□ 0.38
C9orf3-217ENST00000479161 SELPP16109 830 aa17.45■□□□□ 0.38
C9orf3-217ENST00000479161 PDCP20941 246 aa17.45■□□□□ 0.38
C9orf3-217ENST00000479161 CHMP4BP1P59074 171 aa17.45■□□□□ 0.38
C9orf3-217ENST00000479161 PPFIA1Q13136 1202 aa17.45■□□□□ 0.38
C9orf3-217ENST00000479161 ZNF484Q5JVG2 852 aa17.45■□□□□ 0.38
C9orf3-217ENST00000479161 SWSAP1Q6NVH7 229 aa17.45■□□□□ 0.38
C9orf3-217ENST00000479161 PDXDC2PQ6P474 469 aa17.45■□□□□ 0.38
C9orf3-217ENST00000479161 PSRC1Q6PGN9 363 aaPredicted RBP17.45■□□□□ 0.38
C9orf3-217ENST00000479161 POTEBQ6S5H4 581 aa17.45■□□□□ 0.38
C9orf3-217ENST00000479161 DHX38Q92620 1227 aaKnown RBP17.45■□□□□ 0.38
C9orf3-217ENST00000479161 MTMR9Q96QG7 549 aa17.45■□□□□ 0.38
C9orf3-217ENST00000479161 PPP1R12CQ9BZL4 782 aa17.45■□□□□ 0.38
C9orf3-217ENST00000479161 UNC45AQ9H3U1 944 aa17.45■□□□□ 0.38
C9orf3-217ENST00000479161 SETD4Q9NVD3 440 aa17.45■□□□□ 0.38
C9orf3-217ENST00000479161 FAM205CA6NFA0 338 aa17.44■□□□□ 0.38
C9orf3-217ENST00000479161 DDX39AO00148 427 aaKnown RBP17.44■□□□□ 0.38
C9orf3-217ENST00000479161 TREHO43280 583 aa17.44■□□□□ 0.38
C9orf3-217ENST00000479161 DKC1O60832 514 aaKnown RBP eCLIP17.44■□□□□ 0.383e-6■■□□□ 13.1
C9orf3-217ENST00000479161 CKBP12277 381 aa17.44■□□□□ 0.38
C9orf3-217ENST00000479161 PDIA4P13667 645 aaKnown RBP17.44■□□□□ 0.38
C9orf3-217ENST00000479161 INSRRP14616 1297 aa17.44■□□□□ 0.38
C9orf3-217ENST00000479161 CSF2RAP15509 400 aa17.44■□□□□ 0.38
C9orf3-217ENST00000479161 GUCY1B3Q02153 619 aa17.44■□□□□ 0.38
C9orf3-217ENST00000479161 GRIK4Q16099 956 aa17.44■□□□□ 0.38
C9orf3-217ENST00000479161 MARCH8Q5T0T0 291 aa17.44■□□□□ 0.38
C9orf3-217ENST00000479161 RASIP1Q5U651 963 aa17.44■□□□□ 0.38
C9orf3-217ENST00000479161 GPR153Q6NV75 609 aa17.44■□□□□ 0.38
C9orf3-217ENST00000479161 VAV3Q9UKW4 847 aa17.44■□□□□ 0.38
C9orf3-217ENST00000479161 CEP131Q9UPN4 1083 aa17.44■□□□□ 0.38
C9orf3-217ENST00000479161 UMODL1Q5DID0 1318 aa17.44■□□□□ 0.38
C9orf3-217ENST00000479161 TET1Q8NFU7 2136 aa17.44■□□□□ 0.38
C9orf3-217ENST00000479161 NEMFO60524 1076 aa17.43■□□□□ 0.38
C9orf3-217ENST00000479161 CXCL10P02778 98 aa17.43■□□□□ 0.38
C9orf3-217ENST00000479161 ATP4AP20648 1035 aa17.43■□□□□ 0.38
C9orf3-217ENST00000479161 ZNF200P98182 395 aaPredicted RBP17.43■□□□□ 0.38
C9orf3-217ENST00000479161 SPIRE1Q08AE8 756 aa17.43■□□□□ 0.38
C9orf3-217ENST00000479161 GNL2Q13823 731 aaKnown RBP17.43■□□□□ 0.38
C9orf3-217ENST00000479161 FAM26DQ5JW98 314 aa17.43■□□□□ 0.38
C9orf3-217ENST00000479161 TMEM240Q5SV17 173 aa17.43■□□□□ 0.38
C9orf3-217ENST00000479161 LRRC8DQ7L1W4 858 aa17.43■□□□□ 0.38
C9orf3-217ENST00000479161 C16orf59Q7L2K0 433 aa17.43■□□□□ 0.38
C9orf3-217ENST00000479161 MIER3Q7Z3K6 550 aa17.43■□□□□ 0.38
C9orf3-217ENST00000479161 ZNF710Q8N1W2 664 aa17.43■□□□□ 0.38
C9orf3-217ENST00000479161 NRBP2Q9NSY0 501 aa17.43■□□□□ 0.38
C9orf3-217ENST00000479161 TUBE1Q9UJT0 475 aa17.43■□□□□ 0.38
C9orf3-217ENST00000479161 NOL7Q9UMY1 257 aaKnown RBP17.43■□□□□ 0.38
C9orf3-217ENST00000479161 PCDHA12Q9UN75 941 aa17.43■□□□□ 0.38
C9orf3-217ENST00000479161 SAMM50Q9Y512 469 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms