RNA–Protein interactions for RNA: ENST00000479092.5

PTPN7-211, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5

Gene PTPN7, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-211ENST00000479092 CKAP2LQ8IYA6 745 aa13.38□□□□□ -0.27
PTPN7-211ENST00000479092 AFAP1L1Q8TED9 768 aa13.38□□□□□ -0.27
PTPN7-211ENST00000479092 PPP1R13LQ8WUF5 828 aa13.38□□□□□ -0.27
PTPN7-211ENST00000479092 ATP6V0A1Q93050 837 aa13.38□□□□□ -0.27
PTPN7-211ENST00000479092 TMEM60Q9H2L4 133 aa13.38□□□□□ -0.27
PTPN7-211ENST00000479092 ZSCAN16Q9H4T2 348 aaPredicted RBP13.38□□□□□ -0.27
PTPN7-211ENST00000479092 TTC12Q9H892 705 aaPredicted RBP13.38□□□□□ -0.27
PTPN7-211ENST00000479092 GABBR1Q9UBS5 961 aa13.38□□□□□ -0.27
PTPN7-211ENST00000479092 GTF2IRD1Q9UHL9 959 aa13.38□□□□□ -0.27
PTPN7-211ENST00000479092 PCDHA12Q9UN75 941 aa13.38□□□□□ -0.27
PTPN7-211ENST00000479092 CEP131Q9UPN4 1083 aa13.38□□□□□ -0.27
PTPN7-211ENST00000479092 PCDHB6Q9Y5E3 794 aa13.38□□□□□ -0.27
PTPN7-211ENST00000479092 DOCK5Q9H7D0 1870 aa13.38□□□□□ -0.27
PTPN7-211ENST00000479092 IGSF9BQ9UPX0 1349 aa13.38□□□□□ -0.27
PTPN7-211ENST00000479092 IGKV6D-21A0A0A0MT36 114 aa13.37□□□□□ -0.27
PTPN7-211ENST00000479092 C17orf102A2RUQ5 167 aa13.37□□□□□ -0.27
PTPN7-211ENST00000479092 B4GALT4O60513 344 aa13.37□□□□□ -0.27
PTPN7-211ENST00000479092 TOB1P50616 345 aaPredicted RBP13.37□□□□□ -0.27
PTPN7-211ENST00000479092 PPFIA1Q13136 1202 aa13.37□□□□□ -0.27
PTPN7-211ENST00000479092 PTGISQ16647 500 aa13.37□□□□□ -0.27
PTPN7-211ENST00000479092 FAM167AQ96KS9 214 aa13.37□□□□□ -0.27
PTPN7-211ENST00000479092 MTMR9Q96QG7 549 aa13.37□□□□□ -0.27
PTPN7-211ENST00000479092 PCYT2Q99447 389 aa13.37□□□□□ -0.27
PTPN7-211ENST00000479092 RAB34Q9BZG1 259 aa13.37□□□□□ -0.27
PTPN7-211ENST00000479092 TRPV6Q9H1D0 765 aa13.37□□□□□ -0.27
PTPN7-211ENST00000479092 PDLIM7Q9NR12 457 aa13.37□□□□□ -0.27
PTPN7-211ENST00000479092 TRMT13Q9NUP7 481 aaKnown RBP13.37□□□□□ -0.27
PTPN7-211ENST00000479092 TMEM39AQ9NV64 488 aa13.37□□□□□ -0.27
PTPN7-211ENST00000479092 HDAC6Q9UBN7 1215 aa13.37□□□□□ -0.27
PTPN7-211ENST00000479092 ZMYND8Q9ULU4 1186 aaPredicted RBP13.37□□□□□ -0.27
PTPN7-211ENST00000479092 SCN10AQ9Y5Y9 1956 aa13.37□□□□□ -0.27
PTPN7-211ENST00000479092 NRCAMQ92823 1304 aa13.37□□□□□ -0.27
PTPN7-211ENST00000479092 POTEB3A0JP26 581 aa13.36□□□□□ -0.27
PTPN7-211ENST00000479092 DKC1O60832 514 aaKnown RBP eCLIP13.36□□□□□ -0.27
PTPN7-211ENST00000479092 ZSCAN22P10073 491 aaPredicted RBP13.36□□□□□ -0.27
PTPN7-211ENST00000479092 PRKCEQ02156 737 aa13.36□□□□□ -0.27
PTPN7-211ENST00000479092 FAAP100Q0VG06 881 aa13.36□□□□□ -0.27
PTPN7-211ENST00000479092 PTGDRQ13258 359 aa13.36□□□□□ -0.27
PTPN7-211ENST00000479092 GRIK4Q16099 956 aa13.36□□□□□ -0.27
PTPN7-211ENST00000479092 GDF6Q6KF10 455 aaPredicted RBP13.36□□□□□ -0.27
PTPN7-211ENST00000479092 POTEBQ6S5H4 581 aa13.36□□□□□ -0.27
PTPN7-211ENST00000479092 B3GNT9Q6UX72 402 aa13.36□□□□□ -0.27
PTPN7-211ENST00000479092 CCDC155Q8N6L0 562 aa13.36□□□□□ -0.27
PTPN7-211ENST00000479092 ERMNQ8TAM6 284 aa13.36□□□□□ -0.27
PTPN7-211ENST00000479092 NEK9Q8TD19 979 aa13.36□□□□□ -0.27
PTPN7-211ENST00000479092 ATP8B4Q8TF62 1192 aa13.36□□□□□ -0.27
PTPN7-211ENST00000479092 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.36□□□□□ -0.27
PTPN7-211ENST00000479092 MAFBQ9Y5Q3 323 aaPredicted RBP13.36□□□□□ -0.27
PTPN7-211ENST00000479092 POTEMA6NI47 508 aa13.35□□□□□ -0.27
PTPN7-211ENST00000479092 CD4P01730 458 aa13.35□□□□□ -0.27
PTPN7-211ENST00000479092 OATP04181 439 aa13.35□□□□□ -0.27
PTPN7-211ENST00000479092 RAG1P15918 1043 aa13.35□□□□□ -0.27
PTPN7-211ENST00000479092 PRPHP41219 470 aa13.35□□□□□ -0.27
PTPN7-211ENST00000479092 PSMC5P62195 406 aa13.35□□□□□ -0.27
PTPN7-211ENST00000479092 IGBP1P78318 339 aa13.35□□□□□ -0.27
PTPN7-211ENST00000479092 SPIRE1Q08AE8 756 aa13.35□□□□□ -0.27
PTPN7-211ENST00000479092 PLCB4Q15147 1175 aa13.35□□□□□ -0.27
PTPN7-211ENST00000479092 EPHA7Q15375 998 aa13.35□□□□□ -0.27
PTPN7-211ENST00000479092 FOXD4L5Q5VV16 416 aaPredicted RBP13.35□□□□□ -0.27
PTPN7-211ENST00000479092 HAUS3Q68CZ6 603 aa13.35□□□□□ -0.27
PTPN7-211ENST00000479092 BANK1Q8NDB2 785 aa13.35□□□□□ -0.27
PTPN7-211ENST00000479092 LMBR1Q8WVP7 490 aa13.35□□□□□ -0.27
PTPN7-211ENST00000479092 FOXD4L4Q8WXT5 416 aaPredicted RBP13.35□□□□□ -0.27
PTPN7-211ENST00000479092 LXNQ9BS40 222 aa13.35□□□□□ -0.27
PTPN7-211ENST00000479092 HIPK3Q9H422 1215 aa13.35□□□□□ -0.27
PTPN7-211ENST00000479092 RNPEPQ9H4A4 650 aa13.35□□□□□ -0.27
PTPN7-211ENST00000479092 TUBE1Q9UJT0 475 aa13.35□□□□□ -0.27
PTPN7-211ENST00000479092 TBX21Q9UL17 535 aa13.35□□□□□ -0.27
PTPN7-211ENST00000479092 COL1A2P08123 1366 aa13.34□□□□□ -0.27
PTPN7-211ENST00000479092 RRN3P2A6NIE6 340 aa13.34□□□□□ -0.27
PTPN7-211ENST00000479092 EML1O00423 815 aa13.34□□□□□ -0.27
PTPN7-211ENST00000479092 HBP1O60381 514 aa13.34□□□□□ -0.27
PTPN7-211ENST00000479092 F13A1P00488 732 aa13.34□□□□□ -0.27
PTPN7-211ENST00000479092 P4HBP07237 508 aaKnown RBP13.34□□□□□ -0.27
PTPN7-211ENST00000479092 CYP2C9P11712 490 aa13.34□□□□□ -0.27
PTPN7-211ENST00000479092 SYN1P17600 705 aa13.34□□□□□ -0.27
PTPN7-211ENST00000479092 TECP42680 631 aa13.34□□□□□ -0.27
PTPN7-211ENST00000479092 QARSP47897 775 aaKnown RBP13.34□□□□□ -0.27
PTPN7-211ENST00000479092 FXR2P51116 673 aaKnown RBP eCLIP13.34□□□□□ -0.27
PTPN7-211ENST00000479092 ATP2C1P98194 919 aaPredicted RBP13.34□□□□□ -0.27
PTPN7-211ENST00000479092 CYP4A11Q02928 519 aa13.34□□□□□ -0.27
PTPN7-211ENST00000479092 BFSP2Q13515 415 aa13.34□□□□□ -0.27
PTPN7-211ENST00000479092 UGCGQ16739 394 aa13.34□□□□□ -0.27
PTPN7-211ENST00000479092 DTHD1Q6ZMT9 781 aa13.34□□□□□ -0.27
PTPN7-211ENST00000479092 TRMT1LQ7Z2T5 733 aaKnown RBP13.34□□□□□ -0.27
PTPN7-211ENST00000479092 BBXQ8WY36 941 aaPredicted RBP13.34□□□□□ -0.27
PTPN7-211ENST00000479092 LBHD1Q9BQE6 289 aaPredicted RBP13.34□□□□□ -0.27
PTPN7-211ENST00000479092 SETD4Q9NVD3 440 aa13.34□□□□□ -0.27
PTPN7-211ENST00000479092 SEPT9Q9UHD8 586 aaPredicted RBP13.34□□□□□ -0.27
PTPN7-211ENST00000479092 ALPK3Q96L96 1907 aa13.33□□□□□ -0.28
PTPN7-211ENST00000479092 H0YGN5 161 aa13.33□□□□□ -0.28
PTPN7-211ENST00000479092 KIAA0355O15063 1070 aa13.33□□□□□ -0.28
PTPN7-211ENST00000479092 INSRRP14616 1297 aa13.33□□□□□ -0.28
PTPN7-211ENST00000479092 HOXC8P31273 242 aa13.33□□□□□ -0.28
PTPN7-211ENST00000479092 PTK7Q13308 1070 aa13.33□□□□□ -0.28
PTPN7-211ENST00000479092 SF3A1Q15459 793 aaKnown RBP13.33□□□□□ -0.28
PTPN7-211ENST00000479092 XKR3Q5GH77 459 aa13.33□□□□□ -0.28
PTPN7-211ENST00000479092 ARL6IP4Q66PJ3 421 aaKnown RBP13.33□□□□□ -0.28
PTPN7-211ENST00000479092 TAF2Q6P1X5 1199 aa13.33□□□□□ -0.28
PTPN7-211ENST00000479092 FAM173BQ6P4H8 233 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms