RNA–Protein interactions for RNA: ENST00000479034.5

SRRM1-212, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 2,671 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-212ENST00000479034 TRIM47Q96LD4 638 aa8.18□□□□□ -1.1
SRRM1-212ENST00000479034 MMP19Q99542 508 aa8.18□□□□□ -1.1
SRRM1-212ENST00000479034 SAP130Q9H0E3 1048 aa8.18□□□□□ -1.1
SRRM1-212ENST00000479034 ACAD9Q9H845 621 aa8.18□□□□□ -1.1
SRRM1-212ENST00000479034 BRMS1Q9HCU9 246 aa8.18□□□□□ -1.1
SRRM1-212ENST00000479034 PCDHA7Q9UN72 937 aa8.18□□□□□ -1.1
SRRM1-212ENST00000479034 ZSWIM8A7E2V4 1837 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.17□□□□□ -1.1
SRRM1-212ENST00000479034 TLR2O60603 784 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 GNA11P29992 359 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 MRPL12P52815 198 aaKnown RBP8.17□□□□□ -1.1
SRRM1-212ENST00000479034 SP2Q02086 613 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 PRKCZQ05513 592 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 NOGQ13253 232 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 SWI5Q1ZZU3 235 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 CCDC148Q8NFR7 591 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 PARK7Q99497 189 aaKnown RBP8.17□□□□□ -1.1
SRRM1-212ENST00000479034 MAP3K14Q99558 947 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 KIF3AQ9Y496 699 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 NID2Q14112 1375 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 RASSF10A6NK89 507 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 TNPO2O14787 897 aaKnown RBP8.17□□□□□ -1.1
SRRM1-212ENST00000479034 RGS20O76081 388 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 CNGA1P29973 690 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 MCM4P33991 863 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 KCTD2Q14681 263 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 CAVIN1Q6NZI2 390 aaKnown RBP8.17□□□□□ -1.1
SRRM1-212ENST00000479034 MAEAQ7L5Y9 396 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 TRIM50Q86XT4 487 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 ZNF668Q96K58 619 aaPredicted RBP8.17□□□□□ -1.1
SRRM1-212ENST00000479034 CSRNP2Q9H175 543 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 ZNF358Q9NW07 568 aa8.17□□□□□ -1.1
SRRM1-212ENST00000479034 DDX25Q9UHL0 483 aaKnown RBP8.17□□□□□ -1.1
SRRM1-212ENST00000479034 MRPL11Q9Y3B7 192 aaKnown RBP8.17□□□□□ -1.1
SRRM1-212ENST00000479034 COL11A1P12107 1806 aaPredicted RBP8.16□□□□□ -1.1
SRRM1-212ENST00000479034 A0A087X0B3 334 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 MANSC4A6NHS7 340 aaPredicted RBP8.16□□□□□ -1.1
SRRM1-212ENST00000479034 ADCY6O43306 1168 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 ARIH2O95376 493 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 DEKP35659 375 aaKnown RBP8.16□□□□□ -1.1
SRRM1-212ENST00000479034 RCAN1P53805 252 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 KRT85P78386 507 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 PPP2R5BQ15173 497 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 ECM1Q16610 540 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 SH3PXD2AQ5TCZ1 1133 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 NEK8Q86SG6 692 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 CKAP2LQ8IYA6 745 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 RASSF8Q8NHQ8 419 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 SH3TC2Q8TF17 1288 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 ZNF296Q8WUU4 475 aaPredicted RBP8.16□□□□□ -1.1
SRRM1-212ENST00000479034 RGL1Q9NZL6 768 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 ZHX1Q9UKY1 873 aaPredicted RBP8.16□□□□□ -1.1
SRRM1-212ENST00000479034 ADAMTS5Q9UNA0 930 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 PTPRFP10586 1907 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 SPTLC2O15270 562 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 ZBTB24O43167 697 aaPredicted RBP8.16□□□□□ -1.1
SRRM1-212ENST00000479034 FCER1AP12319 257 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 HSPA6P17066 643 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 KARSQ15046 597 aaKnown RBP8.16□□□□□ -1.1
SRRM1-212ENST00000479034 PGM5Q15124 567 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 ANKRD23Q86SG2 305 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 LINC00301Q8NCQ3 95 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 LRRC15Q8TF66 581 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 FGD4Q96M96 766 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 FOXP1Q9H334 677 aaPredicted RBP8.16□□□□□ -1.1
SRRM1-212ENST00000479034 SAMM50Q9Y512 469 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 CHD7Q9P2D1 2997 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 GOLGA6L4A6NEF3 574 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 MARK3P27448 753 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 ADCYAP1R1P41586 468 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 FLT3LGP49771 235 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 NDUFA8P51970 172 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 USP4Q13107 963 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 FAM26DQ5JW98 314 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 NCAPH2Q6IBW4 605 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 LIAT1Q6ZQX7 453 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 NYAP1Q6ZVC0 841 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 HAS1Q92839 578 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 EEF2KMTQ96G04 330 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 PPP1R16BQ96T49 567 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 PDCD2LQ9BRP1 358 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 ETNK1Q9HBU6 452 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 ZFYVE28Q9HCC9 887 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 PXMP2Q9NR77 195 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 LMBRD1Q9NUN5 540 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 RABGAP1Q9Y3P9 1069 aa8.16□□□□□ -1.1
SRRM1-212ENST00000479034 COL6A3P12111 3177 aa8.15□□□□□ -1.1
SRRM1-212ENST00000479034 BIN1O00499 593 aa8.15□□□□□ -1.1
SRRM1-212ENST00000479034 NEMFO60524 1076 aa8.15□□□□□ -1.1
SRRM1-212ENST00000479034 SSBP05455 408 aaKnown RBP eCLIP8.15□□□□□ -1.1
SRRM1-212ENST00000479034 PTPAQ15257 358 aa8.15□□□□□ -1.1
SRRM1-212ENST00000479034 SHC4Q6S5L8 630 aa8.15□□□□□ -1.1
SRRM1-212ENST00000479034 CYFIP1Q7L576 1253 aa8.15□□□□□ -1.1
SRRM1-212ENST00000479034 PLA2G4DQ86XP0 818 aa8.15□□□□□ -1.1
SRRM1-212ENST00000479034 CCDC12Q8WUD4 166 aaPredicted RBP8.15□□□□□ -1.1
SRRM1-212ENST00000479034 TTC12Q9H892 705 aaPredicted RBP8.15□□□□□ -1.1
SRRM1-212ENST00000479034 KCNH7Q9NS40 1196 aa8.15□□□□□ -1.1
SRRM1-212ENST00000479034 KIAA1522Q9P206 1035 aaPredicted RBP8.15□□□□□ -1.1
SRRM1-212ENST00000479034 EML1O00423 815 aa8.15□□□□□ -1.11
SRRM1-212ENST00000479034 MSH4O15457 936 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms