RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 RDH13Q8NBN7 331 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 ARHGEF2Q92974 986 aaKnown RBP12.39□□□□□ -0.43
GFM1-207ENST00000478254 TMEM237Q96Q45 408 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 SEMA4AQ9H3S1 761 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 PRDM11Q9NQV5 511 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 SIK3Q9Y2K2 1263 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.39□□□□□ -0.43
GFM1-207ENST00000478254 CNTNAP5Q8WYK1 1306 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 hCG_2014768A0A024R1R8 64 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 A0A1W2PRG0 241 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 F8VZ95 297 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 USP17L8P0C7I0 530 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 TSPY3P0CV98 308 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 TSPY8P0CW00 308 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 NEFHP12036 1026 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 STX2P32856 288 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 KCNJ1P48048 391 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 PMS2P54278 862 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 DR1Q01658 176 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 BYSLQ13895 437 aaKnown RBP12.39□□□□□ -0.43
GFM1-207ENST00000478254 MUM1Q2TAK8 710 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 ANKRD20A2Q5SQ80 823 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 HP1BP3Q5SSJ5 553 aaPredicted RBP12.39□□□□□ -0.43
GFM1-207ENST00000478254 MEI1Q5TIA1 1274 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 ANKRD20A1Q5TYW2 823 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 ANKRD20A3Q5VUR7 823 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 KRT79Q5XKE5 535 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 VPS36Q86VN1 386 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 RNF10Q8N5U6 811 aaKnown RBP12.39□□□□□ -0.43
GFM1-207ENST00000478254 FBXO25Q8TCJ0 367 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 TBCKQ8TEA7 893 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 OSGEPQ9NPF4 335 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 MGRN1O60291 552 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 TLR2O60603 784 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 PLS1Q14651 629 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 PFKFB3Q16875 520 aaPredicted RBP12.39□□□□□ -0.43
GFM1-207ENST00000478254 SLC30A9Q6PML9 568 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 TMC3Q7Z5M5 1100 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 ZNF444Q8N0Y2 327 aaPredicted RBP12.39□□□□□ -0.43
GFM1-207ENST00000478254 IFT74Q96LB3 600 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 RNF14Q9UBS8 474 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 AMFRQ9UKV5 643 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 RTCBQ9Y3I0 505 aaKnown RBP12.39□□□□□ -0.43
GFM1-207ENST00000478254 COL4A3BPQ9Y5P4 624 aa12.39□□□□□ -0.43
GFM1-207ENST00000478254 RASGRF2O14827 1237 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 CLIC2O15247 247 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 SUN1O94901 812 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 STARD3NLO95772 234 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 H2AFZP0C0S5 128 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 CREB1P16220 341 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 ZNF131P52739 623 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 NPY5RQ15761 445 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 SLC18A3Q16572 532 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 TMEM266Q2M3C6 531 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 H2AFVQ71UI9 128 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 LARP4BQ92615 738 aaKnown RBP12.38□□□□□ -0.43
GFM1-207ENST00000478254 INPP4AQ96PE3 977 aaPredicted RBP12.38□□□□□ -0.43
GFM1-207ENST00000478254 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.38□□□□□ -0.439e-7■■■■□ 24.4
GFM1-207ENST00000478254 FAM129AQ9BZQ8 928 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 SEC63Q9UGP8 760 aaKnown RBP12.38□□□□□ -0.43
GFM1-207ENST00000478254 USH1CQ9Y6N9 552 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 MAP3K15Q6ZN16 1313 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 MYH15Q9Y2K3 1946 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 RGPD1P0DJD0 1748 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 ALX1Q15699 326 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 NLRP10Q86W26 655 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 KDM4CQ9H3R0 1056 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 KBTBD4Q9NVX7 518 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 DLGAP2Q9P1A6 1054 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 PCDHA6Q9UN73 950 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 PCDHA8Q9Y5H6 950 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 MYH6P13533 1939 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 NWD1Q149M9 1564 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 KDM6AO15550 1401 aaPredicted RBP12.38□□□□□ -0.43
GFM1-207ENST00000478254 CCDC169A6NNP5 214 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 YY1P25490 414 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 NONOQ15233 471 aaKnown RBP eCLIP12.38□□□□□ -0.43
GFM1-207ENST00000478254 CALCRLQ16602 461 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 IFI16Q16666 785 aaKnown RBP12.38□□□□□ -0.43
GFM1-207ENST00000478254 ARL6IP4Q66PJ3 421 aaKnown RBP12.38□□□□□ -0.43
GFM1-207ENST00000478254 USP17L2Q6R6M4 530 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 LMNTD2Q8IXW0 634 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 BAP1Q92560 729 aa12.38□□□□□ -0.43
GFM1-207ENST00000478254 METTL5Q9NRN9 209 aaKnown RBP12.38□□□□□ -0.43
GFM1-207ENST00000478254 IRF6O14896 467 aa12.37□□□□□ -0.43
GFM1-207ENST00000478254 PPIP5K2O43314 1243 aa12.37□□□□□ -0.43
GFM1-207ENST00000478254 LRRN2O75325 713 aa12.37□□□□□ -0.43
GFM1-207ENST00000478254 GJC1P36383 396 aa12.37□□□□□ -0.43
GFM1-207ENST00000478254 MSH2P43246 934 aa12.37□□□□□ -0.43
GFM1-207ENST00000478254 KCNMA1Q12791 1236 aa12.37□□□□□ -0.43
GFM1-207ENST00000478254 PHLDB2Q86SQ0 1253 aa12.37□□□□□ -0.43
GFM1-207ENST00000478254 SLIT1O75093 1534 aa12.37□□□□□ -0.43
GFM1-207ENST00000478254 SNUPNO95149 360 aaKnown RBP12.37□□□□□ -0.43
GFM1-207ENST00000478254 SSR1P43307 286 aaKnown RBP12.37□□□□□ -0.43
GFM1-207ENST00000478254 TRAPPC10P48553 1259 aa12.37□□□□□ -0.43
GFM1-207ENST00000478254 LRIG3Q6UXM1 1119 aa12.37□□□□□ -0.43
GFM1-207ENST00000478254 DTX3LQ8TDB6 740 aa12.37□□□□□ -0.43
GFM1-207ENST00000478254 RPGRQ92834 1020 aaKnown RBP12.37□□□□□ -0.43
GFM1-207ENST00000478254 COA7Q96BR5 231 aa12.37□□□□□ -0.43
GFM1-207ENST00000478254 NUDT12Q9BQG2 462 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms