RNA–Protein interactions for RNA: ENST00000477891.1

MINDY3-206, Transcript of MINDY lysine 48 deubiquitinase 3, humanhuman

TSL 1 (best)

Gene MINDY3, Length 2,307 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY3-206ENST00000477891 SLC15A2Q16348 729 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 KNOP1Q1ED39 458 aaKnown RBP11.6□□□□□ -0.55
MINDY3-206ENST00000477891 EDRF1Q3B7T1 1238 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 MCTP2Q6DN12 878 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 SAMD1Q6SPF0 538 aaPredicted RBP11.6□□□□□ -0.55
MINDY3-206ENST00000477891 OTOP1Q7RTM1 612 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 CREG2Q8IUH2 290 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 HSD17B14Q9BPX1 270 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 HINFPQ9BQA5 517 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 SNX12Q9UMY4 172 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 TRAF3IP3Q9Y228 551 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 JRKLQ9Y4A0 524 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 SSU72P8A0A1W2PR75 194 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 CETN3O15182 167 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 SLITRK3O94933 977 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 ACTN1P12814 892 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 CXCR5P32302 372 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 EZH2Q15910 746 aaKnown RBP11.6□□□□□ -0.55
MINDY3-206ENST00000477891 ENOX2Q16206 610 aaKnown RBP11.6□□□□□ -0.55
MINDY3-206ENST00000477891 TDRD12Q587J7 1177 aaKnown RBP11.6□□□□□ -0.55
MINDY3-206ENST00000477891 SFMBT2Q5VUG0 894 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 WDR93Q6P2C0 686 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 RSBN1LQ6PCB5 846 aaPredicted RBP11.6□□□□□ -0.55
MINDY3-206ENST00000477891 TRIM58Q8NG06 486 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 PSMB7Q99436 277 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 GMLQ99445 158 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 GLIS2Q9BZE0 524 aaPredicted RBP11.6□□□□□ -0.55
MINDY3-206ENST00000477891 TMEM39BQ9GZU3 492 aa11.6□□□□□ -0.55
MINDY3-206ENST00000477891 SCAF8Q9UPN6 1271 aaKnown RBP11.6□□□□□ -0.55
MINDY3-206ENST00000477891 CNTNAP1P78357 1384 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 N4BP1O75113 896 aaKnown RBP11.59□□□□□ -0.55
MINDY3-206ENST00000477891 AKAP3O75969 853 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 KIF20AO95235 890 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 SLC9A1P19634 815 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 CASP4P49662 377 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 DLGAP5Q15398 846 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 ZNF772Q68DY9 489 aaPredicted RBP11.59□□□□□ -0.55
MINDY3-206ENST00000477891 RINT1Q6NUQ1 792 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 DPY19L2P1Q6NXN4 242 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 HDXQ7Z353 690 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 TPH2Q8IWU9 490 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 FAM151AQ8WW52 585 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 ARHGEF10LQ9HCE6 1279 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 PDE11AQ9HCR9 933 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 ZNF277Q9NRM2 450 aaPredicted RBP11.59□□□□□ -0.55
MINDY3-206ENST00000477891 FBXO28Q9NVF7 368 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 ZBTB21Q9ULJ3 1066 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 PJA2O43164 708 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 CHMP2AO43633 222 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 NCK2O43639 380 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 BUB1O43683 1085 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 TACC1O75410 805 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 ERLIN1O75477 346 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 VIL1P09327 827 aaKnown RBP11.59□□□□□ -0.55
MINDY3-206ENST00000477891 EN1Q05925 392 aaPredicted RBP11.59□□□□□ -0.55
MINDY3-206ENST00000477891 C2orf54Q08AI8 447 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 CASP8Q14790 479 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 SLC9C1Q4G0N8 1177 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 NFRKBQ6P4R8 1299 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 PPP4R3CPQ6ZMV5 832 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 SUPT20HQ8NEM7 779 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 POLR3CQ9BUI4 534 aaPredicted RBP11.59□□□□□ -0.55
MINDY3-206ENST00000477891 GANQ9H2C0 597 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 SMARCAL1Q9NZC9 954 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 HDAC9Q9UKV0 1011 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 FAM184BQ9ULE4 1060 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 RABGAP1Q9Y3P9 1069 aa11.59□□□□□ -0.55
MINDY3-206ENST00000477891 A0A087X0T9 212 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 LRRIQ3A6PVS8 624 aaPredicted RBP11.58□□□□□ -0.56
MINDY3-206ENST00000477891 RBAK-RBAKDNI3L0D1 243 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 CLIC2O15247 247 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 PSMD10O75832 226 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 EYA4O95677 639 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 SERPING1P05155 500 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 FAM228BP0C875 321 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 RAPGEF1Q13905 1077 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 FAM133AQ8N9E0 248 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 CAGE1Q8TC20 777 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 SYN2Q92777 582 aaPredicted RBP11.58□□□□□ -0.56
MINDY3-206ENST00000477891 DYDC2Q96IM9 177 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 VEZTQ9HBM0 779 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 EHD2Q9NZN4 543 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 TMOD2Q9NZR1 351 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 WRAP73Q9P2S5 460 aaPredicted RBP11.58□□□□□ -0.56
MINDY3-206ENST00000477891 ADAMTS1Q9UHI8 967 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 GCOM1H8Y6P7 765 aaPredicted RBP11.58□□□□□ -0.56
MINDY3-206ENST00000477891 PDXKO00764 312 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 GCNT3O95395 438 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 POLR2MP0CAP2 368 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 ARP10275 920 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 MRPS25P82663 173 aaKnown RBP11.58□□□□□ -0.56
MINDY3-206ENST00000477891 LRCH2Q5VUJ6 765 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 ARHGAP27Q6ZUM4 889 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 KSR1Q8IVT5 923 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 TLR10Q9BXR5 811 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 GOPCQ9HD26 462 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 AIPL1Q9NZN9 384 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 ARMCX3Q9UH62 379 aaPredicted RBP11.58□□□□□ -0.56
MINDY3-206ENST00000477891 SYNPO2Q9UMS6 1093 aa11.58□□□□□ -0.56
MINDY3-206ENST00000477891 ASTN1O14525 1302 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms