RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 ADAM9Q13443 819 aa6.48□□□□□ -1.37
SMNDC1-205ENST00000477763 ARHGAP44Q17R89 818 aa6.48□□□□□ -1.37
SMNDC1-205ENST00000477763 BTBD8Q5XKL5 378 aa6.48□□□□□ -1.37
SMNDC1-205ENST00000477763 OTOP1Q7RTM1 612 aa6.48□□□□□ -1.37
SMNDC1-205ENST00000477763 PROSER1Q86XN7 944 aa6.48□□□□□ -1.37
SMNDC1-205ENST00000477763 CISD2Q8N5K1 135 aaKnown RBP6.48□□□□□ -1.37
SMNDC1-205ENST00000477763 TARS2Q9BW92 718 aaKnown RBP6.48□□□□□ -1.37
SMNDC1-205ENST00000477763 SPATA6Q9NWH7 488 aaPredicted RBP6.48□□□□□ -1.37
SMNDC1-205ENST00000477763 COL4A3BPQ9Y5P4 624 aa6.48□□□□□ -1.37
SMNDC1-205ENST00000477763 FAM90A27PA6NNH2 459 aa6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 GSG1L2A8MUP6 293 aa6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 CYP7B1O75881 506 aa6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 HMGB1P09429 215 aaKnown RBP6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 POU3F2P20265 443 aaPredicted RBP6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 STAT3P40763 770 aa6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 MECP2P51608 486 aaKnown RBP6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 VASNQ6EMK4 673 aa6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 LIPIQ6XZB0 460 aa6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 TTLL7Q6ZT98 887 aa6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 THNSL2Q86YJ6 484 aa6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 NOSTRINQ8IVI9 506 aa6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 ANKRD13AQ8IZ07 590 aa6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 TP53I13Q8NBR0 393 aaPredicted RBP6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 WNK4Q96J92 1243 aa6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 CLIC6Q96NY7 704 aa6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 ORAI3Q9BRQ5 295 aa6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 KRTAP4-11Q9BYQ6 195 aa6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 DLL4Q9NR61 685 aa6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 NTMQ9P121 344 aa6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 SAMD15Q9P1V8 674 aa6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 NOP58Q9Y2X3 529 aaKnown RBP6.47□□□□□ -1.37
SMNDC1-205ENST00000477763 hCG_2014768A0A024R1R8 64 aa6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 SLC12A8A0AV02 714 aa6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 PPM1GO15355 546 aaPredicted RBP6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 ENO2P09104 434 aaPredicted RBP6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 RPL13P26373 211 aaKnown RBP6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 ANAPC15P60006 121 aa6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 HERVK_113P62684 666 aa6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 IGBP1P78318 339 aa6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 SMAD4Q13485 552 aaKnown RBP6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 ZNF460Q14592 562 aa6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 PRR31Q5SQ13 230 aa6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 CD276Q5ZPR3 534 aa6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 CDCA2Q69YH5 1023 aaPredicted RBP6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 DDX46Q7L014 1031 aaKnown RBP6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 C2orf69Q8N8R5 385 aa6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 DTX3Q8N9I9 347 aa6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 ZNF526Q8TF50 670 aaPredicted RBP6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 SYT3Q9BQG1 590 aa6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 PCDH12Q9NPG4 1184 aa6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 LUC7LQ9NQ29 371 aaKnown RBP6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 RIC8BQ9NVN3 520 aa6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 WASF3Q9UPY6 502 aa6.46□□□□□ -1.38
SMNDC1-205ENST00000477763 M0R2C6 588 aa6.45□□□□□ -1.38
SMNDC1-205ENST00000477763 GLRX3O76003 335 aaKnown RBP6.45□□□□□ -1.38
SMNDC1-205ENST00000477763 C4BPAP04003 597 aaKnown RBP6.45□□□□□ -1.38
SMNDC1-205ENST00000477763 CPEP16870 476 aa6.45□□□□□ -1.38
SMNDC1-205ENST00000477763 DBPQ10586 325 aaPredicted RBP6.45□□□□□ -1.38
SMNDC1-205ENST00000477763 SP8Q8IXZ3 490 aa6.45□□□□□ -1.38
SMNDC1-205ENST00000477763 CARFQ8N187 725 aa6.45□□□□□ -1.38
SMNDC1-205ENST00000477763 CHST14Q8NCH0 376 aa6.45□□□□□ -1.38
SMNDC1-205ENST00000477763 LEO1Q8WVC0 666 aaPredicted RBP6.45□□□□□ -1.38
SMNDC1-205ENST00000477763 DLG3Q92796 817 aa6.45□□□□□ -1.38
SMNDC1-205ENST00000477763 BOCQ9BWV1 1114 aa6.45□□□□□ -1.38
SMNDC1-205ENST00000477763 KCNH7Q9NS40 1196 aa6.45□□□□□ -1.38
SMNDC1-205ENST00000477763 B3GALT1Q9Y5Z6 326 aa6.45□□□□□ -1.38
SMNDC1-205ENST00000477763 ADAMTS20P59510 1910 aa6.44□□□□□ -1.38
SMNDC1-205ENST00000477763 ZNF839A8K0R7 811 aa6.44□□□□□ -1.38
SMNDC1-205ENST00000477763 CBX4O00257 560 aa6.44□□□□□ -1.38
SMNDC1-205ENST00000477763 KPNA6O60684 536 aa6.44□□□□□ -1.38
SMNDC1-205ENST00000477763 CHGBP05060 677 aa6.44□□□□□ -1.38
SMNDC1-205ENST00000477763 SARSP49591 514 aaKnown RBP6.44□□□□□ -1.38
SMNDC1-205ENST00000477763 SLURP1P55000 103 aa6.44□□□□□ -1.38
SMNDC1-205ENST00000477763 PIK3R6Q5UE93 754 aa6.44□□□□□ -1.38
SMNDC1-205ENST00000477763 TMC5Q6UXY8 1006 aa6.44□□□□□ -1.38
SMNDC1-205ENST00000477763 RNF180Q86T96 592 aa6.44□□□□□ -1.38
SMNDC1-205ENST00000477763 STK32CQ86UX6 486 aa6.44□□□□□ -1.38
SMNDC1-205ENST00000477763 KIF18BQ86Y91 864 aa6.44□□□□□ -1.38
SMNDC1-205ENST00000477763 UBR7Q8N806 425 aa6.44□□□□□ -1.38
SMNDC1-205ENST00000477763 MARCH10Q8NA82 808 aaPredicted RBP6.44□□□□□ -1.38
SMNDC1-205ENST00000477763 IGDCC4Q8TDY8 1250 aa6.44□□□□□ -1.38
SMNDC1-205ENST00000477763 GPATCH3Q96I76 525 aa6.44□□□□□ -1.38
SMNDC1-205ENST00000477763 MTFR1LQ9H019 292 aa6.44□□□□□ -1.38
SMNDC1-205ENST00000477763 CABP5Q9NP86 173 aa6.44□□□□□ -1.38
SMNDC1-205ENST00000477763 TRAF5O00463 557 aa6.43□□□□□ -1.38
SMNDC1-205ENST00000477763 TRIM13O60858 407 aa6.43□□□□□ -1.38
SMNDC1-205ENST00000477763 HIP1RO75146 1068 aa6.43□□□□□ -1.38
SMNDC1-205ENST00000477763 ZBTB48P10074 688 aaPredicted RBP6.43□□□□□ -1.38
SMNDC1-205ENST00000477763 SDHAP31040 664 aa6.43□□□□□ -1.38
SMNDC1-205ENST00000477763 SCNN1BP51168 640 aa6.43□□□□□ -1.38
SMNDC1-205ENST00000477763 NFKB2Q00653 900 aa6.43□□□□□ -1.38
SMNDC1-205ENST00000477763 IRF9Q00978 393 aa6.43□□□□□ -1.38
SMNDC1-205ENST00000477763 PFKPQ01813 784 aa6.43□□□□□ -1.38
SMNDC1-205ENST00000477763 SART3Q15020 963 aaKnown RBP6.43□□□□□ -1.38
SMNDC1-205ENST00000477763 PCBP1Q15365 356 aaKnown RBP eCLIP6.43□□□□□ -1.38
SMNDC1-205ENST00000477763 SEC23AQ15436 765 aa6.43□□□□□ -1.38
SMNDC1-205ENST00000477763 VMACQ2NL98 169 aa6.43□□□□□ -1.38
SMNDC1-205ENST00000477763 KCNC2Q96PR1 638 aa6.43□□□□□ -1.38
SMNDC1-205ENST00000477763 RBPJLQ9UBG7 517 aa6.43□□□□□ -1.38
SMNDC1-205ENST00000477763 B4GALT6Q9UBX8 382 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms