RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 ZNF302Q9NR11 478 aa14.79□□□□□ -0.04
TOP3A-205ENST00000477508 GTF2IRD1Q9UHL9 959 aa14.79□□□□□ -0.04
TOP3A-205ENST00000477508 MTMR6Q9Y217 621 aa14.79□□□□□ -0.04
TOP3A-205ENST00000477508 TELO2Q9Y4R8 837 aa14.79□□□□□ -0.04
TOP3A-205ENST00000477508 NRCAMQ92823 1304 aa14.78□□□□□ -0.04
TOP3A-205ENST00000477508 CD4P01730 458 aa14.78□□□□□ -0.04
TOP3A-205ENST00000477508 OR52Z1P0C646 297 aa14.78□□□□□ -0.04
TOP3A-205ENST00000477508 SWSAP1Q6NVH7 229 aa14.78□□□□□ -0.04
TOP3A-205ENST00000477508 TRIM50Q86XT4 487 aa14.78□□□□□ -0.04
TOP3A-205ENST00000477508 ATP6V0A1Q93050 837 aa14.78□□□□□ -0.04
TOP3A-205ENST00000477508 FAM167AQ96KS9 214 aa14.78□□□□□ -0.04
TOP3A-205ENST00000477508 PCYT2Q99447 389 aa14.78□□□□□ -0.04
TOP3A-205ENST00000477508 TTC12Q9H892 705 aaPredicted RBP14.78□□□□□ -0.04
TOP3A-205ENST00000477508 TMEM39AQ9NV64 488 aa14.78□□□□□ -0.04
TOP3A-205ENST00000477508 HDAC6Q9UBN7 1215 aa14.78□□□□□ -0.04
TOP3A-205ENST00000477508 VAV3Q9UKW4 847 aa14.78□□□□□ -0.04
TOP3A-205ENST00000477508 NOD1Q9Y239 953 aa14.78□□□□□ -0.04
TOP3A-205ENST00000477508 MAFBQ9Y5Q3 323 aaPredicted RBP14.78□□□□□ -0.04
TOP3A-205ENST00000477508 ALPK3Q96L96 1907 aa14.78□□□□□ -0.04
TOP3A-205ENST00000477508 KAT6AQ92794 2004 aa14.77□□□□□ -0.04
TOP3A-205ENST00000477508 MYH9P35579 1960 aaKnown RBP14.77□□□□□ -0.04
TOP3A-205ENST00000477508 RRN3P2A6NIE6 340 aa14.77□□□□□ -0.05
TOP3A-205ENST00000477508 WNT7AO00755 349 aa14.77□□□□□ -0.05
TOP3A-205ENST00000477508 KIAA0355O15063 1070 aa14.77□□□□□ -0.05
TOP3A-205ENST00000477508 CHMP2AO43633 222 aa14.77□□□□□ -0.05
TOP3A-205ENST00000477508 SMIM10L2AP0DMW4 78 aa14.77□□□□□ -0.05
TOP3A-205ENST00000477508 SMIM10L2BP0DMW5 78 aa14.77□□□□□ -0.05
TOP3A-205ENST00000477508 TXKP42681 527 aa14.77□□□□□ -0.05
TOP3A-205ENST00000477508 FAAP100Q0VG06 881 aa14.77□□□□□ -0.05
TOP3A-205ENST00000477508 EPHA7Q15375 998 aa14.77□□□□□ -0.05
TOP3A-205ENST00000477508 TMEM266Q2M3C6 531 aa14.77□□□□□ -0.05
TOP3A-205ENST00000477508 CCDC60Q8IWA6 550 aaPredicted RBP14.77□□□□□ -0.05
TOP3A-205ENST00000477508 GJA10Q969M2 543 aa14.77□□□□□ -0.05
TOP3A-205ENST00000477508 RAB34Q9BZG1 259 aa14.77□□□□□ -0.05
TOP3A-205ENST00000477508 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.77□□□□□ -0.05
TOP3A-205ENST00000477508 GABBR1Q9UBS5 961 aa14.77□□□□□ -0.05
TOP3A-205ENST00000477508 CEP131Q9UPN4 1083 aa14.77□□□□□ -0.05
TOP3A-205ENST00000477508 PCDHB6Q9Y5E3 794 aa14.77□□□□□ -0.05
TOP3A-205ENST00000477508 POTEB3A0JP26 581 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 C17orf102A2RUQ5 167 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 TNRC18O15417 2968 aaPredicted RBP14.76□□□□□ -0.05
TOP3A-205ENST00000477508 HBP1O60381 514 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 B4GALT4O60513 344 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 RPLP2P05387 115 aaKnown RBP14.76□□□□□ -0.05
TOP3A-205ENST00000477508 MARK3P27448 753 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 HOXC8P31273 242 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 PRPHP41219 470 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 RESTQ13127 1097 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 PPFIA1Q13136 1202 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 PTGDRQ13258 359 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 PTGISQ16647 500 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 POTEBQ6S5H4 581 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 FERMT3Q86UX7 667 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 CKAP2LQ8IYA6 745 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 SPRYD3Q8NCJ5 442 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 NEK9Q8TD19 979 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 ATP8B4Q8TF62 1192 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 TRPV6Q9H1D0 765 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 TMEM60Q9H2L4 133 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 RNPEPQ9H4A4 650 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 PDLIM7Q9NR12 457 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 NRBP2Q9NSY0 501 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 TBX21Q9UL17 535 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 TRPC6Q9Y210 931 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 SSUH2Q9Y2M2 353 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 STK24Q9Y6E0 443 aa14.76□□□□□ -0.05
TOP3A-205ENST00000477508 IGSF9BQ9UPX0 1349 aa14.75□□□□□ -0.05
TOP3A-205ENST00000477508 P4HBP07237 508 aaKnown RBP14.75□□□□□ -0.05
TOP3A-205ENST00000477508 ZSCAN22P10073 491 aaPredicted RBP14.75□□□□□ -0.05
TOP3A-205ENST00000477508 QARSP47897 775 aaKnown RBP14.75□□□□□ -0.05
TOP3A-205ENST00000477508 PSMC5P62195 406 aa14.75□□□□□ -0.05
TOP3A-205ENST00000477508 SPIRE1Q08AE8 756 aa14.75□□□□□ -0.05
TOP3A-205ENST00000477508 PDIA5Q14554 519 aa14.75□□□□□ -0.05
TOP3A-205ENST00000477508 PLCB4Q15147 1175 aa14.75□□□□□ -0.05
TOP3A-205ENST00000477508 ZNF484Q5JVG2 852 aa14.75□□□□□ -0.05
TOP3A-205ENST00000477508 ARL6IP4Q66PJ3 421 aaKnown RBP14.75□□□□□ -0.05
TOP3A-205ENST00000477508 NCAPH2Q6IBW4 605 aa14.75□□□□□ -0.05
TOP3A-205ENST00000477508 GDF6Q6KF10 455 aaPredicted RBP14.75□□□□□ -0.05
TOP3A-205ENST00000477508 CCDC155Q8N6L0 562 aa14.75□□□□□ -0.05
TOP3A-205ENST00000477508 C4orf32Q8N8J7 132 aa14.75□□□□□ -0.05
TOP3A-205ENST00000477508 BBXQ8WY36 941 aaPredicted RBP14.75□□□□□ -0.05
TOP3A-205ENST00000477508 LBHD1Q9BQE6 289 aaPredicted RBP14.75□□□□□ -0.05
TOP3A-205ENST00000477508 PRDM5Q9NQX1 630 aaPredicted RBP14.75□□□□□ -0.05
TOP3A-205ENST00000477508 TRMT13Q9NUP7 481 aaKnown RBP14.75□□□□□ -0.05
TOP3A-205ENST00000477508 CEP290O15078 2479 aa14.75□□□□□ -0.05
TOP3A-205ENST00000477508 COL1A2P08123 1366 aa14.74□□□□□ -0.05
TOP3A-205ENST00000477508 RAG1P15918 1043 aa14.74□□□□□ -0.05
TOP3A-205ENST00000477508 ANP32AP39687 249 aaKnown RBP14.74□□□□□ -0.05
TOP3A-205ENST00000477508 FXR2P51116 673 aaKnown RBP eCLIP14.74□□□□□ -0.05
TOP3A-205ENST00000477508 ATP2C1P98194 919 aaPredicted RBP14.74□□□□□ -0.05
TOP3A-205ENST00000477508 PTK7Q13308 1070 aa14.74□□□□□ -0.05
TOP3A-205ENST00000477508 BFSP2Q13515 415 aa14.74□□□□□ -0.05
TOP3A-205ENST00000477508 NBR1Q14596 966 aa14.74□□□□□ -0.05
TOP3A-205ENST00000477508 GRIK4Q16099 956 aa14.74□□□□□ -0.05
TOP3A-205ENST00000477508 DTHD1Q6ZMT9 781 aa14.74□□□□□ -0.05
TOP3A-205ENST00000477508 ERMNQ8TAM6 284 aa14.74□□□□□ -0.05
TOP3A-205ENST00000477508 CAGE1Q8TC20 777 aa14.74□□□□□ -0.05
TOP3A-205ENST00000477508 SETD4Q9NVD3 440 aa14.74□□□□□ -0.05
TOP3A-205ENST00000477508 DAXXQ9UER7 740 aaPredicted RBP14.74□□□□□ -0.05
TOP3A-205ENST00000477508 WDR81Q562E7 1941 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms