RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 SLC51AQ86UW1 340 aa16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 MMRN2Q9H8L6 949 aa16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 FAM207AQ9NSI2 230 aaPredicted RBP16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 SPATS2LQ9NUQ6 558 aaKnown RBP16.7■□□□□ 0.26
CLSTN1-205ENST00000477264 CACNA1SQ13698 1873 aa16.69■□□□□ 0.26
CLSTN1-205ENST00000477264 C6orf229H3BNL8 230 aa16.69■□□□□ 0.26
CLSTN1-205ENST00000477264 IFI16Q16666 785 aaKnown RBP16.69■□□□□ 0.26
CLSTN1-205ENST00000477264 TDRD12Q587J7 1177 aaKnown RBP16.69■□□□□ 0.26
CLSTN1-205ENST00000477264 ERMARDQ5T6L9 678 aa16.69■□□□□ 0.26
CLSTN1-205ENST00000477264 C15orf52Q6ZUT6 534 aaKnown RBP16.69■□□□□ 0.26
CLSTN1-205ENST00000477264 HOOK3Q86VS8 718 aa16.69■□□□□ 0.26
CLSTN1-205ENST00000477264 BLIDQ8IZY5 108 aa16.69■□□□□ 0.26
CLSTN1-205ENST00000477264 STAG2Q8N3U4 1231 aa16.69■□□□□ 0.26
CLSTN1-205ENST00000477264 ACTRT1Q8TDG2 376 aa16.69■□□□□ 0.26
CLSTN1-205ENST00000477264 TRIM9Q9C026 710 aa16.69■□□□□ 0.26
CLSTN1-205ENST00000477264 NOP53Q9NZM5 478 aaKnown RBP16.69■□□□□ 0.26
CLSTN1-205ENST00000477264 CEP72Q9P209 647 aa16.69■□□□□ 0.26
CLSTN1-205ENST00000477264 BCCIPQ9P287 314 aaKnown RBP eCLIP16.69■□□□□ 0.26
CLSTN1-205ENST00000477264 IRS2Q9Y4H2 1338 aa16.69■□□□□ 0.26
CLSTN1-205ENST00000477264 BAZ2AQ9UIF9 1905 aaKnown RBP16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 GOLGA6L10A0A0M3HER8 536 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 LRRC63Q05C16 580 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 CCDC178Q5BJE1 867 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 NAIF1Q69YI7 327 aaPredicted RBP16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 HIBCHQ6NVY1 386 aaPredicted RBP16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 TLCD1Q96CP7 247 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 XPO6Q96QU8 1125 aaKnown RBP16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 SH3GL3Q99963 347 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 SLITRK6Q9H5Y7 841 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 SLC24A3Q9HC58 644 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.68■□□□□ 0.261e-9■□□□□ 11
CLSTN1-205ENST00000477264 BAIAP2L1Q9UHR4 511 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 COL1A1P02452 1464 aaPredicted RBP16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 hCG_1642624A0A1W2PR95 340 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 OPLAHO14841 1288 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 EPHB6O15197 1021 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 ASIC1P78348 528 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 GFPT1Q06210 699 aaPredicted RBP16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 PPP1R7Q15435 360 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 NBPF20Q3BBV1 942 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 C10orf76Q5T2E6 689 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 HGSNATQ68CP4 663 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 STYK1Q6J9G0 422 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 TBC1D16Q8TBP0 767 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 SCFD2Q8WU76 684 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 ANKRD27Q96NW4 1050 aa16.68■□□□□ 0.26
CLSTN1-205ENST00000477264 ALADP13716 330 aa16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 GCKP35557 465 aa16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 CDCA2Q69YH5 1023 aaPredicted RBP16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 GALNT17Q6IS24 598 aa16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 NSMCE1Q8WV22 266 aa16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 SPAG5Q96R06 1193 aa16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 NSRP1Q9H0G5 558 aaKnown RBP16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 PCDHA4Q9UN74 947 aa16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 NOVA2Q9UNW9 492 aaKnown RBP16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 TRPC6Q9Y210 931 aa16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 FLT1P17948 1338 aa16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 FGRP09769 529 aa16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 TMOD1P28289 359 aa16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 SFMBT2Q5VUG0 894 aa16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 CROCCP2Q86T23 111 aa16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 DAGLBQ8NCG7 672 aa16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 UBLCP1Q8WVY7 318 aaPredicted RBP16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 GPR101Q96P66 508 aaPredicted RBP16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 FAM114A2Q9NRY5 505 aa16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 CNOT8Q9UFF9 292 aaKnown RBP16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 POLLQ9UGP5 575 aa16.67■□□□□ 0.26
CLSTN1-205ENST00000477264 KLHL33A6NCF5 533 aa16.66■□□□□ 0.26
CLSTN1-205ENST00000477264 FTCDO95954 541 aa16.66■□□□□ 0.26
CLSTN1-205ENST00000477264 RPS6KA1Q15418 735 aa16.66■□□□□ 0.26
CLSTN1-205ENST00000477264 SLC18A3Q16572 532 aa16.66■□□□□ 0.26
CLSTN1-205ENST00000477264 KRT71Q3SY84 523 aa16.66■□□□□ 0.26
CLSTN1-205ENST00000477264 CABP7Q86V35 215 aa16.66■□□□□ 0.26
CLSTN1-205ENST00000477264 SRBD1Q8N5C6 995 aaKnown RBP16.66■□□□□ 0.26
CLSTN1-205ENST00000477264 ANKRD13CQ8N6S4 541 aa16.66■□□□□ 0.26
CLSTN1-205ENST00000477264 CNKSR1Q969H4 720 aa16.66■□□□□ 0.26
CLSTN1-205ENST00000477264 TCP11L1Q9NUJ3 509 aa16.66■□□□□ 0.26
CLSTN1-205ENST00000477264 FBXL5Q9UKA1 691 aa16.66■□□□□ 0.26
CLSTN1-205ENST00000477264 CCDC194A0A1B0GVG4 234 aa16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 PGRMC1O00264 195 aaKnown RBP16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 PPP1R12BO60237 982 aaPredicted RBP16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 LUC7L3O95232 432 aaKnown RBP16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 PLCG1P19174 1290 aa16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 KIF5BP33176 963 aa16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 USP11P51784 963 aa16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 MAGOHP61326 146 aaKnown RBP16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 LMNB2Q03252 620 aa16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 MYO1EQ12965 1108 aa16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 STK4Q13043 487 aa16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 ZNF268Q14587 947 aaPredicted RBP16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 SEPT2Q15019 361 aa16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 DPP8Q6V1X1 898 aaPredicted RBP16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 TMC3Q7Z5M5 1100 aa16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 KLHL7Q8IXQ5 586 aa16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 WDR66Q8TBY9 1149 aa16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 ZNF483Q8TF39 744 aaPredicted RBP16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 MAGOHBQ96A72 148 aaKnown RBP16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 CCDC134Q9H6E4 229 aa16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 F8W031 263 aaPredicted RBP16.65■□□□□ 0.26
CLSTN1-205ENST00000477264 RPSAP08865 295 aaKnown RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms